| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 437,444 | A→C | 18.6% | V231G (GTG→GGG) | yajO ← | 2‑carboxybenzaldehyde reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 437,444 | 0 | A | C | 18.6% | 137.4 / 2.6 | 67 | V231G (GTG→GGG) | yajO | 2‑carboxybenzaldehyde reductase |
| Reads supporting (aligned to +/- strand): ref base A (35/16); new base C (3/13); total (38/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.80e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTGCTGTTTTTGGAGTTCCAGTGCCTGAGCAAACTGCGAAGCGTGCATTGATGACGCGCCGATATAACG > NC_000913/437207‑437682 | tCGGCAATCTTTTCCGGCTTCAAAGTGATATCCACCGCATTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGacac < 1:1186116/239‑1 (MQ=255) cGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCCACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCCCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGacac > 1:823666/1‑238 (MQ=255) ttCCGGGTTCCAATTTGTATCCCCCGGGTTAGATGGCCCAACGAGGTGTTCCTCGCGGCAAGTGCCGATAATCGGGTGC‑GCAATGCCCGGTTTAATCCACAACCAGGCCAGCGCAACTTGTGCCCGTGTCGCCCCCAGTTCTTCACTGCCGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCgg < 2:1287842/239‑1 (MQ=255) ttCCGGCTTCAAAGTGATATCCACCGCGTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCCTCGCTTTCTTTTTAGAGCTTTTTCCCCCCCTCATCAGccaccaacccagcg > 1:233936/1‑230 (MQ=255) ttCCCGGTTCAAAGGGTATTCCCCCGGGTTCCATAGGTCATTCAGCTGTTCCTCGGGCGAAGTTCCGAAAATG‑CGTGCGGCAATGCCCGTTTTACTCAACACCCAGGCCAGCGCCACTTTTGCTCGTGTCGCCCCCAGTTCTTCCCTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCAGCAGACACCAGTCGTGCgg < 2:583542/239‑1 (MQ=255) tCAAAGTGATATCCACCGCGTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCCGACCCCAGTCGTGCGGTAGtttt > 1:1287842/1‑237 (MQ=255) aaaGTGATATCCACCGCGTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTtttc > 1:925734/1‑238 (MQ=255) tatCCCCCGCGTTCAATAGCCCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGa < 1:1100670/239‑1 (MQ=255) aCCGCGTTCAATCGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGt < 1:243623/239‑1 (MQ=255) cgcgTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGCGGTTTTTCCCACCCTCTTCAGACACCAATCGTTCGGCATTTTCTCCACACGGAccggcaa > 2:301597/1‑233 (MQ=255) cgcgTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTTCCCCCACGGACCCTTCa > 1:1191500/1‑239 (MQ=255) cgTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGGGATTTTTCCCCACCTCATCAGACCCCAGTCGTGCGGTCGTTTCTCCCCACGGACGGCTCAg > 1:1189357/1‑238 (MQ=255) cgTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGa < 1:732837/239‑1 (MQ=255) cgTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTAACTGACGCCTGTTAACCGCTCTGCGATCTCCGCGTCATTTTCATCGCTTTCTTTATAGAGGTTTTTCCCCACCTCATCAGACACCAGACGTGAGGAGATTTTTCCCCACGGAAGCGTCaaa > 2:243623/1‑237 (MQ=255) attgCTCATCAAGCTGTTCTTCGCGCTAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGccc < 1:794322/236‑1 (MQ=255) cTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCtt > 1:36081/1‑238 (MQ=255) caAGCTGTTCTTCGCGCGAAGATCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGCTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGCCATTTTCCTCGCTTTCTTTCTAGAGATTTTTCCCCACCTCATCAGGCACCAGTCGCGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCaac > 2:274792/1‑237 (MQ=255) tGTTCTTCGGGTGAAGTTCCGATAAGC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCggg < 1:96138/237‑1 (MQ=255) tcttcGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGTCACCAGTCGTGCGGTAGTTGCTCCCCACGGACGCGCCAGACGGCCCCTTTCCAGCGGGCTCCa > 1:270782/1‑239 (MQ=255) aaTC‑GGGGCGGCAAGGCCCGGTTTCCTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCcct < 1:1258792/239‑1 (MQ=255) cccgggggggCAAGGCCCGGTTTACACACAACCCGGGCCCGGGCAACTTGGTCTCGTGTACCCCCCGGTTTTTCCCTGCCGCCTGTTAACCGCTCTGCGACCTGCGCGTCATTTTCACCGCTTTCTTTATAGAGATTTTTCCCCCCCTCATCAGACCCCAGTCGGGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCcctc < 2:1239381/231‑1 (MQ=255) c‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCCGTCGTGCGGCAGTTTCTCCCCACGGACGCGTCCGACGGCCCCTTTCCACCGGGCTCCATGGAATTACCGCcccccccccc > 2:853887/1‑238 (MQ=255) tGCGGCAATGCCCGGTTTACTCAACAACCCGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCACACGGGCTCCATGGAATTACCGCACCGCCTCCCTGAt > 1:419903/1‑239 (MQ=255) ggCATTGCCCGGTTTACTCAACAACAGGGCCCGCGCAACTTGTGGTGGGGTCGCCCCCATTTCTTCACGGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCCCCTCATCAGACCCCAGTCGTGCGGTAGTTTCTCCCCCCGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATaa < 1:713312/238‑1 (MQ=255) ggCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTCCCCGCTCTGCGCTCTGCGCGTCCTTTTCCTCGCTTTCTTTCTCGAGATTTTTCCCCACCTCATCCGCCCCCAGTCGTGCGGTCGTTTCTCCCCCCGGCCGCGTCAGCCGCCCCCTTTCCAGCGGGCCCACTGAAATAACCGCAACGCCCCCCTAATAac > 2:73690/1‑239 (MQ=255) cAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCG‑CCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGCCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGCAGTTTCTCCCCCCGGACGCGTCAGACGGCCCCTTGCACGCCGGCCCCATGTAATTACCGCCACGCCCCCCCGAAAAaaca > 2:1319969/1‑239 (MQ=255) acttccggtttttCTCAACAACCGGGCCCGCGAATCTTGGCCCTGGGGCGCCCCGAGTTCTGTACTGCCGCTTTTTAACCTCTCGGCGTGCGGCGCTGAATTTTCAGCGTTTTCTTTAGGAAGATTTTTCCCCCCCGTCGCCGCCCCCGGTCGTGCGGTAGTTTCTCCCCCCGGACGCGTCAGACGGCCCTTGGCCCGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAacac < 2:1189357/229‑1 (MQ=255) cTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCCGATAACACAGTGGAAGCAtct > 1:336501/1‑238 (MQ=255) tCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCAtctc > 1:115060/1‑238 (MQ=255) cacaccCCGGCCCGCTCAACTCGGTCTCGTGTCCCCCCCATTTTTTCACTGACGCCTGTTACCCGCTCCTCGATCTGCGGTTCATTTTCATCTCTTTCTTTATAGGAATTTTTCCCCCCCTCCTCAGACACCAGTCGGGCGGGAGTTTCTCCCCACGGACCCGTCAGCTCGCCCCTTGCCGGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTcgcg < 2:493216/238‑1 (MQ=255) ccAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGCTAACACAGTGGTAGCATCCCGCGccct > 1:297485/1‑238 (MQ=255) gcgcAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGGGGTAGCATCTCGCGCTCTTCTTCACGa > 1:731583/1‑239 (MQ=255) cgcAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACggt > 1:768544/1‑237 (MQ=255) acttttttcttgtgtCCCCCCCTTTTCTTCCCTGGCGCTGGTTAACCGCTCTGCAGTCTGCGCTTCATTTTCATCGCTTTTTTTATAGGTATTTTTCCCCCCCTCATCAGCCCCCGGTCGTGCGGTAGTTTCTCCCCCCGGACGCGTCAGACGGCCCCTTGCAAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATaaa < 2:115060/228‑1 (MQ=255) cTTGGGCTCGTGTCCCCCCCAGTTTTTCACTGACCCCTGTTAACCGCTCTGCGTTCCGCGCGTCATTTTCACCGCTTTCTTTATAGAGATTTTTCCCCCCCTCATCAGACCCCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCcct < 2:1069962/192‑1 (MQ=255) cGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCGGATTGTa > 1:265281/1‑239 (MQ=255) cGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCCCGCTCTTCTTCACGATAAATCAGATTGTa > 1:1287916/1‑239 (MQ=255) tgttcccccctATTTTTTCTCTGACCCTTTTAAACCGCTTTGCGATCTGCGCGTCATTTTCATCGTTTTTTTTATAGAGTTTTTTCCCCCCCTCATCAGACCCCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAg < 2:925734/233‑1 (MQ=255) gtgtCGCCCCCAGTTCTTCCCTTACGCCTTTTAACCGCTTTGGGATCCGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAg < 1:440422/239‑1 (MQ=255) gtgtCCCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAg < 1:957993/239‑1 (MQ=255) tgtCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAaca > 1:1069962/1‑192 (MQ=255) tgtCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAACTCAACTTGTa > 1:336703/1‑237 (MQ=255) tgtCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGCGGTAGCATCTCGCGCTCTTCTTCACGATAAAACAAATTGAAgg > 2:957993/1‑238 (MQ=255) tgtCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTACTGATAAAACAGTGGTAGCATCTCTCCCCCTTCTTCACGCACAATCAAATTGTaat > 2:795538/1‑237 (MQ=255) gCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGCTAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGAt > 1:800825/1‑238 (MQ=255) gCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCAAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGAt > 1:878726/1‑238 (MQ=255) cattttttcACTGACGCCTTTTACCCGCTCGGCGATCTGCGCGTAATTTCCATCGCTTTCTTTATAGAGATTTCCCCCCACCTCACCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCa < 1:73690/233‑1 (MQ=255) cAGTTCTTCCCTGACGCCTGTTACCCGCTTTGCGTTCTGCGCGTCATTTTCACCGCTTTCTTTATAGAGATTTTTCCCCCCCTCATCAGACACCAGTCGTGCGGTGGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCa < 1:573045/239‑1 (MQ=255) ttttttcTCTGCCCCCTTTTACCCGCTCTGCGATCTGCCCGTCATTTTCCGTGCTTTCTTTATACAGATTTTCCCCCCCCGCAGCAGACCCCAGTCGTGCGGTAGTTTCCCCCCACGGACGCGTCACACGGACCCTTGCCAGCGGGCTCCATGGAATTCCCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATa < 2:36081/235‑1 (MQ=255) gTTCTTCACTGCCTCCTGTTAACCGTTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCCCCTCATCAGCCCCCAGTCGTGCGGTAGTTTCCCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATa < 1:1206007/239‑1 (MQ=255) cACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCCTGGACTTACCGCCACCCCCTCCTGATAACCCAGTGGAACCATCTCGCCCTCTTCTTCCCGACAAAACAGAATGAAGGGATCCTGCCAACTTACa > 2:631068/1‑239 (MQ=255) aCGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCTCCTTGCCAGCGGGCTCCCTGGAATTCCCCCCACGCCCTCCTGTTAACACAGTGGTAGCATTCCGCGCCCTTCTTCCCGATAAACCAGATTGTAGTGATCCTGCACACTGACAAACt > 2:939430/1‑238 (MQ=255) aCGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGCCAAACt > 1:1198443/1‑238 (MQ=255) cTGTTACCCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCGCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTg < 1:1248958/214‑1 (MQ=255) ttAACCGCTCTGGGATCTGCGCGCTATTTTCATCGCTTTCTTTATAGGAATTTTTCCCCACCTCATCAGACCCCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAg < 1:301597/239‑1 (MQ=255) cGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCCCGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTg < 1:853887/239‑1 (MQ=255) ctctGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCTAACTGGAAAACTGCGCCCAGCCGTGCt > 1:1096411/1‑239 (MQ=255) ctctGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCCCTTCTTCACGATAAATCCGATTGTAGTGATCCTGCATACTGCCAAACTGCGCCCAccccg > 2:99010/1‑234 (MQ=255) tcggcgcCTTATTTTCATCGCTTTCTTTAAAGAGATTTTTCCCCACCTCATCAGACCCCAGTCGTGCGGTAGTTTCCCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTGCTGTTTTTg < 1:776035/235‑1 (MQ=255) ttggccgTCCTTTTCCTCCGTTTCTTTAAAGAGATTTTCCCCCCCCCCAACACACCACGGTCGTGCGGTAGTTTCCCCCCACGAGCGCCTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTGCTGTTTTTGGa < 2:1287916/234‑1 (MQ=255) ttgccgcttaTTTTCTTCGTTTTTTTTATGGAATTTTTCCCCCCCCCCATCAGCCCCCAGTCGTGCGGTTGTTTCCCCCCCGGGACGCGTCAGGCGGCCCCGTGCCAGCGGGCTCAATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCGGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTGCTGTTTTTGGa < 2:265281/230‑1 (MQ=255) gcgcGTCATTTTCATCGCTTTCTTTTTAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCa > 1:266011/1‑201 (MQ=255) cgcgTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTGCTGTTTTTGGAGt > 1:626310/1‑238 (MQ=255) cATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTGCTGTTTTTGGAGTTCCAGt > 1:1118420/1‑239 (MQ=255) taaaggaaTTTTCCCCCCCCCCATCAAACCCCAGTCGGGCGGTAGTTCCCCCCCCCGGCCGCGTCAGACGGCCCCTTGCCAGCGGGCTCAATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTGCTGTTTTTGGAGTTCCAGTGCCTGAGCAAACTGCGaa < 1:795538/232‑1 (MQ=255) tttttCCACAGCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCTCACGGACGCGTCAGACGGCCCATTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGCTAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCTTGCATACTGACAAACTGACACCAACCGAGATGTTTTTGGAGCTCCAGTGCCGGAGCAAACTGCGAAACggacat > 2:1256575/1‑234 (MQ=255) cACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGCTAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGGGCTTGTTTTGGAGTTCCAATCCCTGAGCAACCTGCCAAGCGGCCATTGGTGAcc > 2:1160711/1‑238 (MQ=255) aCCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGGCCTGTTTTTGGAGTTCCAGTGCCTGAGCAAACGGCGAAGGGGCCATTGTTGAcgc > 2:9555/1‑239 (MQ=255) atcaGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTGCTGTTTTTGGAGTTCCAGTGCCTGAGCAAACTGCGAAGCGTGCATTGATGACGCGCCGa > 1:476100/1‑239 (MQ=255) tcaGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGTTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTgcg < 1:382252/169‑1 (MQ=255) acCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGGGGTAGCATCTCGCGCTCTTCTTCACGCTAAATCAGATTGTAGTGATCCTGCATACTGCCAAACTGCGCCCAGCCGTGCGGTTTTTGGAGTTCCAGTGCCCGGGCAAACTGCGAAGCGTGCATTTAGGACGCCCCGagaaaaac > 2:625258/1‑232 (MQ=255) | TCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTCATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTGCTGTTTTTGGAGTTCCAGTGCCTGAGCAAACTGCGAAGCGTGCATTGATGACGCGCCGATATAACG > NC_000913/437207‑437682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |