| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,015,351 | T→C | 13.9% | intergenic (+37/+3) | metE → / ← ysgA | 5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase/putative carboxymethylenebutenolidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,015,351 | 0 | T | C | 13.9% | 170.0 / 3.6 | 80 | intergenic (+37/+3) | metE/ysgA | 5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase/putative carboxymethylenebutenolidase |
| Reads supporting (aligned to +/- strand): ref base T (26/41); new base C (3/9); total (29/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.60e-01 | |||||||||||
TATGACATTCACTCGCCAAACGTACCGAGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGC > NC_000913/4015123‑4015577 | tATGACATTCACTCGCCAAACGTACCGAGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGGGCAGGCGGCGCAGAACTTGCGTCGGGGGGAAAATCCAA‑ACCGGGTGGTAATACCCCCCGGGCTTTtct > 1:626761/1‑229 (MQ=255) aTGACTTTCACTCGCTAAACGTACCGAGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCGGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACGTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTtct < 1:138068/228‑1 (MQ=255) aCATTCACTCGCCAAACGTACCGAGCGAGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCAtt < 1:625194/229‑1 (MQ=255) tCACTCGCCAAACGTACCGAGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCCCGGCTGGCCAGAAACCCGCGCGCGACTGGCCAACCTGGGGCAGGCGGCGCAGAACTTGCGTCGGGGGGAAAAACCCA‑ACCGGGTGGTAATAACCCCCGGGCTTTTCTCAttcaa > 2:698345/1‑225 (MQ=255) cgccccAAGCGTACCGAGCGGGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAACCGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGa < 1:25570/225‑1 (MQ=255) tCGCCAAACGTACCGAGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGGGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGGCTTTTCTCCTTACAGCGAc > 1:49380/1‑229 (MQ=255) gCCAAACGTACCGAGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGAACTGGCGAACAGGGTGCAGGCGGCGCCGAACTTGCGCCGGGGGGAAAACCCAACACCGGG‑GGGAAAACCCCCCGGCCTTTTTCCCTTACaaggcatt > 2:369869/1‑222 (MQ=255) gttccgggggTGGAATGGATTGAAGCCTTGATGAAAAAAGCGGTAAAACGCATTCCGGCAGGGCGCCTGGTGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCcca < 2:414611/220‑1 (MQ=255) gggggttgAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATa < 1:151885/222‑1 (MQ=255) gAGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAACACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTCCCGCGGGGGTAAAAGCCCA‑ACCGGGGGGGAAAACCCCCAGGTCTTTTCTCCTTACAGCGACCCGTTCccaccca > 2:482112/1‑226 (MQ=255) gAGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGACCTTGCGTCGGGGGGAAAATCCAA‑ACCGTGTGGTAATACCACCCGGGCTTTTTTCCTTACACCGACTTCTTCCCACCAt > 1:149973/1‑228 (MQ=255) gAGCGTGGAAGGGATTGAAGCCTGGGTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATa < 1:281593/229‑1 (MQ=255) tGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCCCAGAACTTGCGCCGGGGGTAAAATCCAA‑ACCGGGTGGGAATAACCCCCGGCCTTTTTTCATTCCAGCGCCCTCTTCCCCCCCTACCGc > 2:623902/1‑228 (MQ=255) tGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGGGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCt < 1:554075/229‑1 (MQ=255) gAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCCGGGGCAAAATCCAA‑ACCCGCGGGGAAACCCACCCGGGCTTTTTCCCTTACACCGCCTTCCTCCCACCATACCGCCTa > 2:243145/1‑229 (MQ=255) tgtgATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGGGCGCCTGGGGGTCAACCCGGACTGGGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTaaa < 2:626760/226‑1 (MQ=255) agggATTGAAGCCTGGCTGAAGAAAGCGGCAAAACGCATTCCGGGAGAGCGCCTGTGGGTCAACCCGGACTGGGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTaaa < 2:285010/227‑1 (MQ=255) aTTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCa > 1:26910/1‑228 (MQ=255) tgaacgcTTGCTGAAGAAAGCGGCAAAACAGATTCCGGGAGAGCGCCTTTGGGTCAACCCGGACGGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGTGCGGCACTGGCGAACATGGGGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAAGACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATTCTGCTTAAACCAtt < 2:472591/222‑1 (MQ=255) aaGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGGGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGGGGGAATACCACCCGGGCTTTTCTCATTAAAAAGACTTCTTCCCACCAAAATCCTTAAACCCTTcc > 2:685354/1‑228 (MQ=255) aGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGGCTTTTCTACTTACAGCAACTTCTTCCCACCATACTCCTTACACCATTCCac > 1:339466/1‑228 (MQ=255) ttGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCCGCGGGGGTAAACTCCAA‑ACCGGGCGGTAATCCCACCCGGTCTTTTCCCCTTACACCGAATTCCTCCCACCCCACTGCATAAAACATTTCCG‑CAt > 2:696585/1‑228 (MQ=255) ttGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAAAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGGGGTAATCCCACCCGGTCTTTTCTCATTTCAGCGACTTCTTCCCCCCATACCCCTTAAACCATTCCAG‑Caa > 2:738266/1‑227 (MQ=255) aaaGCGGCAAAACGCATTCCGGCAGAGCGCCTGGGGGTCAACCCGGACTGGGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTgccag < 1:55090/229‑1 (MQ=255) cgccgCAAACCCCATGCCGGAAGAGCGCCTGTGGGTCAACCCGGGCGGTGGCCGGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACTCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTgccagcc < 2:322009/225‑1 (MQ=255) aGCGGCAAAACGCCATCCGGCAGGGCGCCGGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCTAACATGGTGCAGGCGGCCCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTgccagcc < 2:507153/229‑1 (MQ=255) cAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCCGAACTTGCGTCGGGGGTAAGATCCAA‑ACCCGGGGGTAATACCACCCGGGCTTTTTTCTTTAAAACGGATTCTTACCCCCATAACTCTTAAACCCTTCCAGTCACAC‑CTCCCAGCCAactt > 2:693340/1‑229 (MQ=255) cAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGAAAAATCCAA‑ACCGGGTGGTAATACCACCCGGCCTTTTCTCATTACAGCGACTTCTTCCCACCCTACTGCTTAAACCATTCCAG‑CATACCCTGCCAGCCAtctt > 1:356861/1‑229 (MQ=255) aCGCATGCCGGGAGGGCGCCTTTGGGTCCACCCGGACTGTGGCCTGAAACCGCGGGGCGGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTg < 2:219660/228‑1 (MQ=255) cagtCCGGGAGGGCGCCTGTGGGTGAAGCCGGCCTGGGGCCCGAAAACGGGGGGCTGGCCAGAAACCCGCGCGGCACTGGCGAAAATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGa < 2:383190/226‑1 (MQ=255) tgcggcggGGCGCCTGGGGGTCAACCCGGACTGTGGGCCGAAAACGCGCGGCTGGCCAGAAACCCGGGGGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATg < 2:247256/226‑1 (MQ=255) ccGGCGGAGCGCCTGTGGGTCACCCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGATAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCg < 2:228273/229‑1 (MQ=255) cgggagggggcCTGTGGGGCCCCCCGGACTGGGGCCTGAAAACCGGCGGGCGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCgg < 2:615350/220‑1 (MQ=255) cGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCg < 1:369869/228‑1 (MQ=255) cgcCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTTGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGGGGTAATACCACCCGGTCTTTTCTCATTACAGGGCCTTCTTCCCACCATAATGCTTTAACCATTCCCG‑CATACGCTGCCAGCCCTCTCCTGACGATGCGGCATGATaa > 2:744789/1‑228 (MQ=255) cgcCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGGAAAATCCAA‑ACCGGGTGGGAATACCACCCGGTCTTTTCTCATTCAAGCGAATTCTTCCCACCATCATGCTTAAACCCTTCCAC‑CATAACCTCCCCGCCAGCTTCTGCAAAGCCGGCAtaaaag > 2:395329/1‑224 (MQ=255) cTGGGGGTCAACCCGGACGGTGGCCCGAAAACGCGCGGCTGGCCAAAAACCCGGGCGGCACTGGCGAACAGGGTGCAGGCGGCGCAGGACTTGCGTCGGGGGTAAAAGCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTTCCAGCCATCTTCTGCAGATGCGGCATGATAGCTc < 2:577053/229‑1 (MQ=255) ccccGGACTGGGGCCTGAAACCGCGGGGGTGGCCAGAAACCCGCGCGGCACTGGCGAAAATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAAt < 2:339466/228‑1 (MQ=255) aCCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGCAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTTTGCAGATGCGGCATGATAACTCGGGCGCTAAt > 1:503130/1‑229 (MQ=255) aCTGTGGCCTGAAAACGCGCGGCTGTCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCCGGGGTAAAACCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTAAAGCGACCTCCTCCCACCTTACTGCCTAAACCATTCCCG‑CCAACGCTGCCTGCCACCCTCTGCAGATCCGCCACGAAAGCCCGTCCGCTAAtaccac > 2:132324/1‑223 (MQ=255) cgtgggCCTGATACCGGGCGGTGGGCCAGAAACCCGGTCGGCACTGGCGAACAGGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCACATGACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGt < 2:431134/224‑1 (MQ=255) cggAAAACGCGGGGCCGGCCAGAAACCCGGGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAatgca < 1:599063/227‑1 (MQ=255) gcgcgGGTGGCTCGAAACCCGGGCGGGCCTGGCGGACAAGGTGCGGGGGGCGCAGAACTTGGCGCGGGGGTAAAAGCCAA‑ACCGGGTGGTAATACCCCCCGGTCTTTTCTCATTACAGCGCCTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCgg < 2:567609/228‑1 (MQ=255) cgcgGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTgccag > 1:195211/1‑166 (MQ=255) cgcgGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTgccag < 2:195211/166‑1 (MQ=255) cgcgGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGCCGATAATCAGCGTTGAATGCATGCCCGGc > 1:647517/1‑228 (MQ=255) gcgGCTGGCCAAAAACCCGCGGGGCACTGGCGAACATGGGGCGGGCGCCGCAGACCTTGCGTTGGGGGTAAAATCCAA‑TCCGGGTGGGAATACCACCCGGGCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCg < 2:618678/228‑1 (MQ=255) ccAAAACCCCGGGCGGCCCTGGCGAACATGGGGCAGGCGGAGCAGAACTTGCGTCGGGGGTAACATCCAA‑ACCGGGTGGTAATACCCCCCGGTCTTTTCTCATTACAGCGACTTCGTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGt < 2:31839/227‑1 (MQ=255) aaaCCCGGGCGGCACTGGCGAACATGGTGAGGGCGGCGCAGAACTGGCCTCGGGGGTAAAATCCAA‑ACCTGGTTGTAATACCTCCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CAGTCGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGa < 1:744790/229‑1 (MQ=255) cgcgcgGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATTCGGCATGATAGCTCGGGCGATAATCACCGTTGAATGCATGCCCGGCGTCCCGGTACACggaaat > 1:624462/1‑223 (MQ=255) tcTGGCCAAAATGGTGCATGCGGCTCAAAACTGGCGTCGGGGGTAAAATCCAA‑CCCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGCCTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCttt < 2:49380/228‑1 (MQ=255) cATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGCTAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTag > 1:689774/1‑228 (MQ=255) aGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGc > 1:602678/1‑228 (MQ=255) aGGCGGCCGAGAACTTGCGTCGGGGGTAAAATCCAA‑CCCGGGTGGTAATCCCCCCCGGTCTTTTCCCATTACAGCCACTTCCTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCa < 2:26910/229‑1 (MQ=255) ggctggcgaGAACTTGCGTCGGGGATAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCa < 1:685355/220‑1 (MQ=255) cgcAGAACTTGCCTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATTCCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGcc < 1:30966/228‑1 (MQ=255) cAGAACTTGCGTCTGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTgg < 1:395329/229‑1 (MQ=255) tttcgctgtggggGAAGACCCAA‑GCCGGGGGGGAATACCCCCCGGTCTTTTCCCATTTCGGGGCCTTTTTCCCGCCATCCTGCGTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCa < 2:356861/219‑1 (MQ=255) cTTGCTGCGGGGGTAAAATCCAA‑ACCGGGGGGTAATACCCCCCGGTCTTTTCCCAGTACGTCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCGTTCGCATTAGCAGCCCGCAGCGCCTGGCGCa < 2:640006/228‑1 (MQ=255) ggttAAACTCCAA‑ACCGGGTAGGAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACg < 1:698346/226‑1 (MQ=255) ggttAAAATCCAA‑ACCGGGTGTTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTCCCCACCATACTGCTTAAACCATTCCAG‑CATCCGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACg < 1:696586/226‑1 (MQ=255) gggTAAAATCCAA‑ACCGGGTGGTAATTCCACCCGGTCTTTTCCCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACg < 1:522326/229‑1 (MQ=255) aaaTCCAA‑ACCGGGTGGTAATACCACCAGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCtctc < 1:302699/229‑1 (MQ=255) cAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCg > 1:21833/1‑229 (MQ=255) ca‑aCCGGGTGGTAATCCCACCCGGTCTTTTCCCATTCCAGCGACTTCTTCCCCCCATACCGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCg < 2:624461/227‑1 (MQ=255) aa‑aCCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCg < 1:568690/228‑1 (MQ=255) aa‑aCCGGGTGGTAATACCACCCGGTCTTTTCCCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCg < 1:630187/228‑1 (MQ=255) cccGTGTGGTAATTCCCCCCCGTCTTTTCTCATTACAGCGTCTTCTTCCCACAATACTGCTGAAACCATTCCAG‑CATCCGCTGCCAGCCATTTTCTGCAGTGGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGaa < 2:695782/228‑1 (MQ=255) ccGGGTGTTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCGTCCCCCCATACTGCTTAAACCATTCCAG‑CAGACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGaa < 2:273322/228‑1 (MQ=255) ccGGGTGGTAATTCCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCCCCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGaa < 1:175300/228‑1 (MQ=255) gtggtAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGACTGGCGCATGGTTTCAACGCCATCCTGCGGAATggt > 1:312028/1‑226 (MQ=255) ggtAATTCCCCCCGGTCTTTTCCTATTACCGGGCCTTCTTCCCACCAGACTGGTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGtt < 2:85006/229‑1 (MQ=255) ggtAATACCCACCGGTCTTTTCCCAATCCAGCGACTTCGTCCCACCATTCTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTg < 1:243145/227‑1 (MQ=255) tAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGtt > 1:85006/1‑227 (MQ=255) cccgtgcTTTTCTCATTCCAGGGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATGCGCTGCCAGCCATCTTCTGCAGATGGGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGacc < 2:463382/222‑1 (MQ=255) cccGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCCGATGCGGCATGATAGCTCGGGCGCTAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCCCTGCTTTCGCATTAGCACCCCGCAGCCCCTGGCCCCTGGTTTCAACCCTCCCCTTCGGACTGCACTCATCCTGacc > 2:73784/1‑228 (MQ=255) cccGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGACTGGTTTCAACGCTATCCTGCGGAATGCTGTTATCCTGacc > 1:237025/1‑228 (MQ=255) cccGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCACCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGacc > 1:297827/1‑228 (MQ=255) cccGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTGAAACCATTCCAG‑GATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGacc < 1:623903/228‑1 (MQ=255) cccGGGCTTTTCCCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGacc < 1:482112/228‑1 (MQ=255) tCTTTTCTCATTACAGCGACTTCTCCCCAACAGACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCAGCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCata < 2:647516/229‑1 (MQ=255) tttttCTCATTCCCGCGCCGTCTTCCCCCCAGACTGCTTAAACCCATCCAG‑CATACGCGGCCAGCCGTTTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCatat < 2:13092/228‑1 (MQ=255) tctcATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGGGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGc > 1:722936/1‑229 (MQ=255) | TATGACATTCACTCGCCAAACGTACCGAGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAA‑ACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAG‑CATACGCTGCCAGCCATCTTCTGCAGATGCGGCATGATAGCTCGGGCGATAATCAGCGTTGAATGCATGCCCGGCGTCCGGGTACACGATAATCTCTGCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGC > NC_000913/4015123‑4015577 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |