| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,805,981 | T→C | 6.4% | K363E (AAA→GAA) | waaG ← | UDP‑glucose:(heptosyl)lipopolysaccharide alpha‑1,3‑glucosyltransferase; lipopolysaccharide core biosynthesis protein; lipopolysaccharide glucosyltransferase I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,805,981 | 0 | T | C | 6.4% | 200.5 / 2.2 | 61 | K363E (AAA→GAA) | waaG | UDP‑glucose:(heptosyl)lipopolysaccharide alpha‑1,3‑glucosyltransferase; lipopolysaccharide core biosynthesis protein; lipopolysaccharide glucosyltransferase I |
| Reads supporting (aligned to +/- strand): ref base T (25/32); new base C (2/2); total (27/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01 | |||||||||||
GATGAATAGCGTGCCACTCTCTGTCTGCGCCCAAAACGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCT > NC_000913/3805704‑3806261 | gATGAATATCGTGCCACTCGCTGTCTGCGCCCAAAACGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGc < 2:790037/289‑1 (MQ=255) aaTAGCGTGCCACTCTCTGTCTGCGCCCAAAACGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTCTTCT‑GGCAAGCtata > 2:848408/1‑289 (MQ=255) aTAGCGTGCCACTCTCTGTCTGCGCCCAAAACGGGCATCCACAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATAc < 1:596311/289‑1 (MQ=255) gCGTGCCACTCTCTGTCTGCGCCCAAAACGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTCTTCT‑GGCAAGCTATACaaa > 2:1006478/1‑289 (MQ=255) gTGCCACTCTCTGTCTGCGCCCAAAACGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAAt > 2:503134/1‑288 (MQ=255) gCCACTCTCTGTCTGCGCCCAAAACGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATcc < 2:851049/288‑1 (MQ=255) ctctGTCTGCGCCCAAAACGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTAt < 1:503134/289‑1 (MQ=255) ctctATCTTCGCCCAAAACGGGCTGCCGCAATGTGAGTAGATTTTTTATAATCTCTTTTAATGTCGACCCCTTGAGCCATTTAAGAAAATAGCGTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTAt < 2:189667/289‑1 (MQ=255) cccAAAACGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATgg < 1:137249/289‑1 (MQ=255) tttAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAAc > 1:99944/1‑289 (MQ=255) gaagtcaaccccTTGTGCCAATTTAGGAAAGTGCTTTTCCCGGGCAGTTCAAGGCGTAAAGTTCGGCGGGGCTTCAGTTCACGAAAGGCCTCGGCGGTTAGTTTTTTGACCTTCGGAAAAGCAACTTTACCACGCCCAAGTGGGGGCAGCGGCTCTTTTAAATCAACCCACTAAACCACCTGTTATGATAGCCGGGGGTTTTTTTGGGCAAG‑TGTACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCt < 2:194756/281‑1 (MQ=255) tcgtcCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTAc > 1:294438/1‑289 (MQ=255) cgtcCCCTAATGCCATTTAAGAAAATAGCTTTTCCCGAGCAGTGCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCACTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTGTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACg < 2:693033/289‑1 (MQ=255) gtcCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑g > 2:136384/1‑200 (MQ=255) gtcCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑g < 1:136384/200‑1 (MQ=255) gtcCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGt > 1:40495/1‑289 (MQ=255) gtcCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGt > 1:769558/1‑289 (MQ=255) gtcCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAAAGCTTTACGt > 1:365790/1‑289 (MQ=255) ccccTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTaa < 1:938049/289‑1 (MQ=255) ccTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTaaaa < 2:1076424/289‑1 (MQ=255) gtgCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTc > 1:790478/1‑289 (MQ=255) gAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGt > 2:1094626/1‑288 (MQ=255) tttCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGaa < 2:40495/289‑1 (MQ=255) tttCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGaa < 1:104180/289‑1 (MQ=255) tttCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGaa < 1:442161/289‑1 (MQ=255) ttCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTAt > 2:670791/1‑183 (MQ=255) ttCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTAt < 1:670791/183‑1 (MQ=255) ttCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATg < 2:662115/225‑1 (MQ=255) ttCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATg > 1:662115/1‑225 (MQ=255) ttCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGAt > 2:35823/1‑289 (MQ=255) tAATGTACGAAGAGTCTCCAGTTCACCAAAGACCTCGCCGTTCAGTTTTTTGATCTCTGCAAAAGCATCTTTACCACGCCAACGTGTGGCAAGCGGCTCTTTGAATTCAAACATCTAAACCTCCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATTGAGGGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTTTTCCTGAGAGAAAGGTTCAGCGATGACCGTTc < 2:311908/288‑1 (MQ=255) aaTGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTCTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCca < 1:1006478/289‑1 (MQ=255) cgaGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGc < 2:863101/288‑1 (MQ=255) cgaGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGc < 1:38932/288‑1 (MQ=255) aGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTTCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGtt < 2:672301/261‑1 (MQ=255) aGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGtt > 1:672301/1‑261 (MQ=255) aGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCAt < 2:294438/288‑1 (MQ=255) gTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATc > 2:981386/1‑288 (MQ=255) gAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATgcg < 1:981386/289‑1 (MQ=255) aCCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTa > 2:350522/1‑288 (MQ=255) tttttGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTCTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCt < 1:848408/286‑1 (MQ=255) ccTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGcgcg < 2:919186/264‑1 (MQ=255) ccTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGcgcg > 1:919186/1‑264 (MQ=255) ccTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTaaa < 1:35823/288‑1 (MQ=255) aaGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAAcc < 2:99944/289‑1 (MQ=255) tCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGCGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCCTCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGTTAACCaagca > 2:838780/1‑289 (MQ=255) aCCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGa > 1:119348/1‑288 (MQ=255) aCGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGATCATTCTCCGCCCAGGCCATTCGCAATGGCGCCTGAGTTAAAGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCCATGACCGTTACACAATTTGAATCCGCAATATAATGCGCGTACCCCCATAACGCTGCTGTTAAAACAGGAAACCCAGCAGTGATCg > 2:212681/1‑288 (MQ=255) cGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCCCCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGAGATCATTCTCCGCCAAGGCAATTCGCAATGGCGACTGAGTTAACTCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGCTGACCGTTCCACAATTGGCATCAACATTCTAATGCTCGTACCCAAATACCGCTGTTGTTAAAACAGGTAACCtagcgatgacccct > 2:785414/1‑279 (MQ=255) aTTCAACCATCTAAACCTCCTGTAAGTATATCCGCGGGTTTTTCT‑GGCAAGCTATACAAATCCTGGGTATCGGCATAATGGCGAGTATTCTCCGCCCAGGCCATTCGCAATGGCGACTTAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTTAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGAAGAACGATACCCGCGGCTTCCt < 1:726795/289‑1 (MQ=255) tCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAAcc > 2:531004/1‑238 (MQ=255) tCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAAcc < 1:531004/238‑1 (MQ=255) accaccTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGc < 1:350522/289‑1 (MQ=255) accaccTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGc < 1:1094626/289‑1 (MQ=255) accaccTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGc < 2:769558/289‑1 (MQ=255) cTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGTTCGCTTCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGtaa < 2:790478/289‑1 (MQ=255) gTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATTGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGCGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGCAGAACGATACCCGCGGCTTCCTGCTACGCGGGCTGCAGtaata > 2:328920/1‑289 (MQ=255) gTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATg > 2:171617/1‑281 (MQ=255) gTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATg < 1:171617/281‑1 (MQ=255) cgcgGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCt > 2:860618/1‑289 (MQ=255) cgcgGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATAAACGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATAGCTTCTAGAAGAACGATCCCCGCGGCTTCCTGATACGCGGATTGCAGTAATAACTCAGCg > 1:390362/1‑286 (MQ=255) | GATGAATAGCGTGCCACTCTCTGTCTGCGCCCAAAACGGGCATCCGCAATGAGAGTAGATTTTTTATAATCTCTTTTAATGTCGTCCCCTTGTGCCATTTAAGAAAATAGCTTTTCCCGGACAGTTCAAAGCGTAATGTACGACGAGTCTCCAGTTCACGAAAGACCTCGCCGTTCAGTTTTTTGACCTCTGCAAAAGCATCTTTACCACGCCAAAGTGTGGCAAGCGGCTCTTTTAATTCAACCATCTAAACCACCTGTAATGATATCCGCGGCTTTTTCT‑GGCAAGCTATACAAATCCTGAGTATCGGCATAATGGCGAGCATTCTCCGCCCAGGCCATTCGCAATGGCGACTGAGTTAACGCTTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCT > NC_000913/3805704‑3806261 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |