| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1800053 = | 118 (0.860) | 3 (0.020) | 3/506 | NT | 2.5% | intergenic (‑54/+43) | rpmI/infC | 50S ribosomal subunit protein L35/translation initiation factor IF‑3 |
| ? | NC_000913 | 1800077 = | 116 (0.860) | intergenic (‑78/+19) | rpmI/infC | 50S ribosomal subunit protein L35/translation initiation factor IF‑3 | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGTCCTGGTACAGATGAAGGCGACTATCAGGTAAAACTCCGCAGCCTGATTCGCTTTCTCGAAGAGGGTGATAAAGCCAAAATCACGCTGCGTTTCCGCGGTCGTGAGATGGCGCACCAGCAAATCGGTATGGAAGTGCTTAATCGCGTGAAAGACGATTTGCAAGAACTGGCAGTGGTCGAATCCTTCCCAACGAAGATCGAAGGCCGCCAGATGATCATGGTGCTCGCTCCTAAGAAGAAACAGTAAGGCCTTCAAGTAGCACTGTCTGTGGAGCCTTCGGGCTTCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1800344‑1800053‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacagACAGTGCTACTTGAAGGCCTTACTGTTTCTTCTTAGGAGCGAGCACCATGATCATCTGGCGGCCTTCGATCTTCGTTGGGAAGGATTCGACCACTGCCAGTTCTTGCAAATCGTCTTTCACGCGATTAAGCACTTCCATACCGATTTGCTGGTGCGCCATCTCACGACCGCGGAAACGCAGCGTGATTTTGGCTTTATCACCCTCTTCGAGAAAGCGAATCAGGCTGCGGAGTTTTACCTGATAGTCGCCTTCATCTGTACCAGGACGGAATTTAATTTCCTTAAC > NC_000913/1800077‑1800362 CGTCCTGGTACAGATGAAGGCGACTATCAGGTAAAACTCCGCAGCCTGATTCGCTTTCTCGAAGAGGGTGATAAAGCCAAAATCACGCTGCGTTTCCGCGGTCGTGAGATGGCGCACCAGCAAATCGGTATGGAAGTGCTTAATCGCGTGAAAGACGATTTGCAAGAACTGGCAGTGGTCGAATCCTTCCCAACGAAGATCGAAGGCCGCCAGATGATCATGGTGCTCGCTCCTAAGAAGAAACAGTAAGGCCTTCAAGTAGCACTGTCTGTGGAGCCTTCGGGCTTCA < 2:965566/289‑1 TCCTGGTACAGATGAAGGCGACTATCAGGTAAAACTCCGCAGCCTGATTCGCTTTCTCGAAGAGGGTGATAAAGCCAAAATCACGCTGCGTTTCCGCGGTCGTGAGATGGCGCACCAGCAAATCGGTATGGAAGTGCTTAATCGCGTGAAAGACGATTTGCAAGAACTGGCAGTGGTCGAATCCTTCCCAACGAAGATCGAAGGCCGCCAGATGATCATGGTGCTCGCTCCTAAGAAGAAACAGTAAGGCCTTCAAGTAGCACTGTCTGTGGAGCCTTCGGGCTTCACA > 1:628721/1‑289 AGTGGTCGAATCCTTCCCAACGAAGATCGAAGGCCGCCAGATGATCATGGTGCTCGCTCCTAAGAAGAAACAGTAAGGCCTTCAAGTAGCACTGTCTGTGAAGCCAGAAGGCCCCACAGACAGTGCTACTTGAAGGCCTTACTGTTTCTTCTTAGGAGCGAGCACCATGACCATCTGGCGGACTTCGATCTTCGTTGGGAAGGATTCGACCACTGCCAGTTCTTGCAACTCGTCTTTCACGCGATTAAGCACTTCCCTACCGCTTTGCTGGTCAGCCATCcaccgaacg > 2:252677/1‑280 tgCCCAACAAAGATCGAAGGCCGCCAGATGATCATGGTGCTCGCTCCTAAGAAGAAACAGTAAGGCCTTCAAGTAGCACTGTCTGTGAAGCCCGAAGGCTCCACAGACAGTGCTACTTGAAGGCCTTACTGTTTCTTCTTAGGAGCGAGCACCATGATCATCTGGCGGCCTTCGATCTTCGTTGGGAAGGATTCGACCACTGCCAGTTCTTGCAAATCGTCTTTCACGCGATTAAGCACTTCCATACCGATTTGCTGGTGCGCCATCTCACGACCGCGGAAACGCAGCG < 1:252677/287‑1 AAACAGTAAGGCCTTCAAGTAGCACTGTCTGTGAAGCCCGAAGGCTCCACAGACAGTGCTACTTGAAGGCCTTACTGTTTCTTCTTAGGAGCGAGCACCATGATCATCTGGCGGCCTTCGATCTTCGTTGGGAAGGATTCGACCACTGCCAGTTCTTGCAAATCGTCTTTCACGCGATTAAGCACTTCCATACCGATTTGCTGGTGCGCCATCTCACGACCGCGGAAACGCAGCGTGATTTTGGCTTTATCACCCTCTTCGAGAAAGCGAATCAGGCTGCGGAGTTTT > 2:665880/1‑288 CACAGACAGTGCTACTTGAAGGCCTTACTGTTTCTTCTTAGGAGCGAGCACCATGATCATCTGGCGGCCTTCGATCTTCGTTGGGAAGGATTCGACCACTGCCAGTTCTTGCAAATCGTCTTTCACGCGATTAAGCACTTCCATACCGATTTGCTGGTGCGCCATCTCACGACCGCGGAAACGCAGCGTGATTTTGGCTTTATCACCCTCTTCGAGAAAGCGAATCAGGCTGCGGAGTTTTACCTGATAGTCGCCTTCATCTGTACCAGGACGGAATTTAATTTCCTTA > 1:688672/1‑289 CAGACAGTGCTACTTGAAGGCCTTACTGTTTCTTCTTAGGAGCGAGCACCATGAGCATCTGGCGGCCTTCGATCTTCGTTGGGAAGGATTCGACCACTGCCAGTTCTTGCAAATCGTCTTTCACGCGATTAAGCACTTCCATACCGATTTGCTGGTGCGCCATCTCACGACCGCGGAAACGCAGCGTGATTTTGGCTTTATCACCCTCTTCGAGAAAGCGAATCAGGCTGCGGAGTTTTACCTGATAGTCGCCTTCATCTGTACCAGGACGGAATTTAATTTCCTTAAC < 1:665880/289‑1 CGTCCTGGTACAGATGAAGGCGACTATCAGGTAAAACTCCGCAGCCTGATTCGCTTTCTCGAAGAGGGTGATAAAGCCAAAATCACGCTGCGTTTCCGCGGTCGTGAGATGGCGCACCAGCAAATCGGTATGGAAGTGCTTAATCGCGTGAAAGACGATTTGCAAGAACTGGCAGTGGTCGAATCCTTCCCAACGAAGATCGAAGGCCGCCAGATGATCATGGTGCTCGCTCCTAAGAAGAAACAGTAAGGCCTTCAAGTAGCACTGTCTGTGGAGCCTTCGGGCTTCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1800344‑1800053‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacagACAGTGCTACTTGAAGGCCTTACTGTTTCTTCTTAGGAGCGAGCACCATGATCATCTGGCGGCCTTCGATCTTCGTTGGGAAGGATTCGACCACTGCCAGTTCTTGCAAATCGTCTTTCACGCGATTAAGCACTTCCATACCGATTTGCTGGTGCGCCATCTCACGACCGCGGAAACGCAGCGTGATTTTGGCTTTATCACCCTCTTCGAGAAAGCGAATCAGGCTGCGGAGTTTTACCTGATAGTCGCCTTCATCTGTACCAGGACGGAATTTAATTTCCTTAAC > NC_000913/1800077‑1800362 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |