| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,550,538 | Δ1 bp | 5.8% | coding (8/900 nt) | yfeX ← | porphyrinogen oxidase, cytoplasmic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,550,538 | 0 | T | . | 5.8% | 209.2 / 3.3 | 69 | coding (8/900 nt) | yfeX | porphyrinogen oxidase, cytoplasmic |
| Reads supporting (aligned to +/- strand): ref base T (30/34); new base . (2/2); total (33/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.51e-01 | |||||||||||
ATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTT > NC_000913/2550312‑2550750 | atgttgcAGCTCTTCCGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑g < 1:327816/222‑1 (MQ=255) ttCAGCTCTTCCGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGAc < 1:441541/228‑1 (MQ=255) cttctGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTtc < 1:87474/228‑1 (MQ=255) tctGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCCCTCTAAACCT‑GAGACATTGTtcct > 1:556133/1‑228 (MQ=255) cagCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTAACAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTtcctc < 1:274217/226‑1 (MQ=255) ccAACGCCGCCGCTCAGAGCGGTCCAGGTGTTGGTACCAAAGGCAACCAGCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGaa < 1:446649/228‑1 (MQ=255) ccAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCCCCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGaa < 1:232220/228‑1 (MQ=255) ccAACGCCCCCGCTCAGGGCGCGCCAGGTTTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGaa < 1:575917/228‑1 (MQ=255) ccAACCCCTCCGCGCAGATCTCGCCAGGTTTCGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAGGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGaa < 1:668014/228‑1 (MQ=255) aCGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGCCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAaat > 1:298204/1‑228 (MQ=255) cgggcgagcCGGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACg < 1:248930/225‑1 (MQ=255) agggggcgcCGGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAGCCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACg < 2:429482/223‑1 (MQ=255) agCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCCCGCGGCAATGTTCTGGCAAAATGCCACCCTGAACCC‑GAGCCATTTTTCCTCCTGAAAATAAAAATGcccccca > 2:387333/1‑223 (MQ=255) agCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATACCCGCGCGGCAATTTTCTGGCAAAATGCCACTCTGAACC‑‑CAGACCTTGTTCCCCCTGAAAATATAAATTCCAcccca > 2:591206/1‑224 (MQ=255) agCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTAACGTTGGCTTCGATCCAAATCGCCCCGCGGCAATGTTCTGGCAACAGGCCACCCTGAACC‑‑GAGACATTGTTCCCCCTGAAAATAATAATGCCCCGCaa > 2:169428/1‑228 (MQ=255) acgcCAGGTGTTGGTACCAAAGGCAACCAACGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTTGCGGCAAATGTTTTACGGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATc < 1:405942/227‑1 (MQ=255) gcCAGGTTTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCg < 1:480227/228‑1 (MQ=255) gttgttACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTGCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCa < 1:582189/226‑1 (MQ=255) gttACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCAttgtt > 1:115224/1‑228 (MQ=255) gttACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAAGCCCACCCAATCCGTGGCAttgtt > 1:460874/1‑228 (MQ=255) ttACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCAttgtt < 1:670604/227‑1 (MQ=255) ccAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGt > 2:39594/1‑215 (MQ=255) cAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTg < 1:39594/215‑1 (MQ=255) aaCCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTAtttt > 1:274622/1‑228 (MQ=255) accaccGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGGGGCATGTTTGAGCGCTCtttt > 1:136695/1‑227 (MQ=255) cACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAACTGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGCAATGGTTGAGCGCTATTTTACGTGgtt > 1:334352/1‑228 (MQ=255) ccGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACCCTGAACCT‑GAGACATTGTTCCTCCTGAAAATATTAATGCCACGCAATCCGTGCCATTTTTGAGCGCTATTTTACGTGTTTTTTAGCGCAGGCGGt > 1:691006/1‑228 (MQ=255) ggAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGTCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAACTAATAATGCCACGCAATCCGTGGAATGGTTTCGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGtgtg > 1:330586/1‑228 (MQ=255) cAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAAcgccgc < 1:387333/228‑1 (MQ=255) gTTTGGCGGCAAATGTTTTACGGGCCGTCCGCAGGGCGTCAACTTCCCCTTTCCCGTTGGCCTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCa < 1:680423/228‑1 (MQ=255) tttGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGCCATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGGTTTTTCAACGGCAAATTaaaccccccaa > 2:45652/1‑219 (MQ=255) ttGTCCGTAAAGTTTTTTCCGGCCGCACGCGGGGGGTGAACTTCCCCGTTCCCGTTGGCTCCGGACCAAATCGCCGCGCGGCAATGTGCTGGCAAAATGCCCCTCTGATCCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGa < 2:361278/228‑1 (MQ=255) ttGGCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGGTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGa < 1:266132/228‑1 (MQ=255) cGGCAAATTTTTTACTGGCCGCACGCGGGGCGCCAACTTCCCCTTGCACTGTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATa < 2:115224/226‑1 (MQ=255) ggCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTCTTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCGGATAAt > 1:427200/1‑227 (MQ=255) aaTGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GCGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGGGTTTTTTCGGGGCGGCGGTTTGTTCGGAGGCAAATTAACGCCCCCAGATAAttttcc > 1:502971/1‑226 (MQ=255) gTTTTGCTGGGCGCACGCAGGGCGTCAAATGCCCCTTGCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGa < 1:563848/228‑1 (MQ=255) gCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTTGCTTCGATCCAAATCGCCGCGCGGCACTGTTCTTGCCAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCACTCCGTGGCATTGTTGAGCGCTCTTTTCAGTGTTTTTTACCGGCGGGTGTTTGTTTCGGCGCAATATTACCCCGCACGTTCATTTTACTGACTTTcgctc > 2:330735/1‑224 (MQ=255) gCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCCCCAGATAATTTTACTGACTTTCCAGt > 1:154722/1‑228 (MQ=255) ccGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGt > 1:228635/1‑227 (MQ=255) cgcacgcgGGGCGTCAAGTTCCCCGTTCACCTTGGCTTCGAACCAAATCCGCGCGGGGCAATGGTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGGGGCATTGTTGAGCGCTATTTGACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGACGCCAGAGAATTTTACTGACGTTCCAGttt < 2:671523/228‑1 (MQ=255) cgcacgcaGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GCGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCCTTGTTTAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGGCGCAAATTAACGCCGCCAGATAATTTTTTTGAGTTTCCCGt > 2:634605/1‑226 (MQ=255) gggCGTCCACTTCCCCTTTCACGTTGGCTTAGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GACAAATTGTTACTCCTGCAACTAATAATGCGTCGCAATCCGTGGCTTTGTTGAGGGCTATTTTACGTGTTTTTTCGCGGCGGCGGGTTTTTCATACGCAAATTAAACCCTCCCTACAATATTCCTGGCTTTCCTGtttttttaggg > 2:592826/1‑222 (MQ=255) gggCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGGTTTTCAGGGt > 1:117647/1‑228 (MQ=255) gtggTCAATTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGGGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGGCATTGTTCCTGCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTa < 2:274622/225‑1 (MQ=255) ggCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGAAAATTAACGCCCCCCAATAATTTTACTGGCTTTCCAGGTTTTAAgggaa > 2:446195/1‑226 (MQ=255) aaCTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGCTTGTTCAGACGCAAATTAACGCCGCCAGATATTTTTACTGACTTTCCAGTTTTTCAGGGAATCggc > 1:602146/1‑225 (MQ=255) aCTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACC‑‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGa < 1:169428/228‑1 (MQ=255) aCTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACC‑‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGa < 1:591206/228‑1 (MQ=255) ttCCCCTTGCACGTTGGCTTCGATCCAAATCGCCGCGCCGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGa < 1:676054/227‑1 (MQ=255) tCCCATTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTACTACTGAAAATAATAATGCCACGCAAACCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAAACGCACAATAACGCAGCAAGATAGTTTTATTGGCTTTCCAGTTTTTCAGGGCATCGTTCGAAg > 1:87592/1‑228 (MQ=255) ttCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCAtt > 2:625079/1‑227 (MQ=255) ttccGTTGGCTGCGATCCAAATCGCCACGCGGCAATTTTCGGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTTGCATTGTTGAGCTCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTGTTTCAGGGTATCGTCCGAAGGCATTaa < 2:556133/225‑1 (MQ=255) tctcGTTGGCTGCTAACCAAATCGCCGCGCGGCAATGTTCTGGCAAAAGGCCACTCTGACCCT‑GAGACATTGTTCCTCCTGAAAAGAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTaa < 2:502971/225‑1 (MQ=255) tcccGTTGGCGTCGATCCAAATCGCCGCGCGGCAATGTTCTCGAAAAAGGCCACTCTGAACCT‑TGGACATTGTTCCTCCTGAAAATAATTATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTaa < 2:136695/225‑1 (MQ=255) ttGGATTCGATCCAAATCGCCGTGCTGCAAGTTTCTGTCAAAATGCCACCCTGAACCT‑GAGCCATTGTTCCTCCTGAAAATAATAATTCCACGGAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCTGTTTGTCCAGACGCAAATTAACGCCGCCAGATAATTTTACTTACTTTCCAGTTTGTCAGGGTATCGTCCGAAGGCATTAACCCtt < 2:688260/228‑1 (MQ=255) aTCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTAGGTGTTTTTTCGCGGCGGCGGGTTGTTTTGACGCAAATTAACGCCGCCAGATCATTTTACTGGCTTTCCAGGTTTTCAGGTTACCTCCCTAAGGGATTAACCCtaccatccca > 2:677228/1‑218 (MQ=255) aTCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCCAAGGCATTAACCCTTCAGGCCCa > 1:621938/1‑227 (MQ=255) cAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACt > 1:124204/1‑228 (MQ=255) aaTGTTCGGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGaa < 2:124204/225‑1 (MQ=255) ttttCTTGCAAAATTCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGt < 1:253505/226‑1 (MQ=255) tGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGt < 1:446195/228‑1 (MQ=255) tGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGt < 1:625079/228‑1 (MQ=255) tGTTATGGAAAAATGCCCATCTGAACTT‑TGGACTTTTGTCCTCCTGAAAATAATTATGCCTCGCAATCCGTGTCATTGGTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGGCGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGt < 2:691006/228‑1 (MQ=255) ttGGGAAAATGCCGCCCGGAACCTGGAGA‑TTTGTTCCTCCTAAAAATCATAATGCCGCGCAATCCGTGGCATTATTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGTGGTTTGTTCAGACGCAAATTAACGCCGCCAAATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCt < 2:125814/227‑1 (MQ=255) gCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACTTGTTTTTTCGCGCCGGAGTTTTGTTCAGACGCAAATTAACGCCGCCAGTTAATTTTACTGACTTTCCAGTTTTTCAGTGAATCGTCCGCAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGCACTg > 1:410426/1‑219 (MQ=255) gCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCATGGCATCGTCCGAAGGCTTTAACCCTTCCGGACCACGCCATTCCCCCCTCAACgggatgc > 1:125814/1‑220 (MQ=255) aTGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGtt > 1:227780/1‑228 (MQ=255) aTGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGtt > 1:166268/1‑228 (MQ=255) | ATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTT > NC_000913/2550312‑2550750 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |