| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,489,443 | Δ1 bp | 6.4% | coding (738/1221 nt) | argD ← | bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,489,443 | 0 | A | . | 6.4% | 168.0 / 4.3 | 62 | coding (738/1221 nt) | argD | bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase |
| Reads supporting (aligned to +/- strand): ref base A (29/29); new base . (2/2); total (31/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.67e-01 | |||||||||||
ATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCT‑TCCAGCACTTCAGGGGTAT‑TGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAA > NC_000913/3489218‑3489663 | aTGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCT‑TCCAGCACTTCAGGGGTAT‑TGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGGCAGAATATCCGCCGTAAc > 1:414827/1‑228 (MQ=255) ggTCAACAAAACGCTGGCGTTTCGCCTGAATGCCT‑TCCAGCACTTCAGGGGTAT‑TGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCGGAGGATTACCGCCGTAGGTGGAACCGTGAAAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAACCGCCGCCTAACGCTTT‑CCCAAA‑GGGCCAAATAACCGGCGAAAccc > 2:295391/1‑226 (MQ=255) ggTCAACAAAACGCTGGCGTTTCGCCTGAATGCCT‑TCCAGCACTTCAGGGGTAT‑TGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGGGCTAATCGGGAAGCCCCCGCCCAAC‑CCTT‑CGCCCAGGGTCAGAATATCCGGCGTAAccc > 2:427053/1‑226 (MQ=255) ggTCAACAAAACGCTGGCGTTTCGCCTGAATGCCT‑TCCAGCACTTCAGGGGTAT‑TGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGCGGACCCCTGAGAACCAGGATGAAACGCAGAAGCCATTTCAGCCGTGGCCCGCATTGCGCTACATGGGCAGCCACCGCATAACGCTCT‑CGCAGA‑GTACACAATATCCGCCGAAAccc > 2:253877/1‑226 (MQ=255) tcaaaaaagccTGGGGTTTCGCCCGTAGGCCTCTCCAGCCCGT‑AGGGGGATGTGATGCATA‑CAAGCGCCCCCCCCGAAACTACCCGGGCAAGGGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCg < 2:170604/218‑1 (MQ=255) aaTGCCT‑TCCAGCACTTCAGGGGTAT‑TGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGCAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGACTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGCAGTGCACGTAA‑GCAAACAAAtaga > 2:53618/1‑224 (MQ=255) gCCT‑TCCAGATCTTAAGGGGTAG‑TGATG‑AAACAAAGCGCCCCCCCCGCTACTGCAAAGGCCAGAGTATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGt < 1:613182/228‑1 (MQ=255) aGCACTTCAGGGGTAT‑TGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGCGGAAACGCAGAAGCAATTTCCGCCGTGGCCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGGAGGAATAACCGGCGTACCCCCGCAGAGAAAGTAC‑GCAAACAAAACGCCGGGCCGcccc > 2:656762/1‑228 (MQ=255) ccTTGAGGGGTAT‑TGATG‑ATATCAACCGCCCCCCCCGCTACGGCACAGGCAAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATc < 1:427053/227‑1 (MQ=255) cAGGGGTAT‑TGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAACCGCCGCCTAACGCTTT‑CGCAGA‑GGCCAGAATATCCTGCGTAACGCCGTAGTGCATGTAA‑GCAACCAAATCGCCGGTCCGCCCCATCCCgc > 1:243373/1‑228 (MQ=255) t‑tGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTa > 1:475100/1‑171 (MQ=255) t‑tGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAACGCAAA‑AAATGCCCGGTCCCCCCCAccccccccggcaat > 2:549007/1‑218 (MQ=255) atCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCaa > 1:32669/1‑227 (MQ=255) atCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCaa > 1:19118/1‑227 (MQ=255) atCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCaa > 1:5530/1‑227 (MQ=255) gccgccCCCGCTACTGAAAGGGCCAGAGGATTCCCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCaat < 1:387335/228‑1 (MQ=255) ccgccCCCGCAACCGCAAAGGCAAGCGGATGCCCGCCTTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCaata < 2:281028/228‑1 (MQ=255) gccCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGCACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCTGCGCCTAACGCTTT‑CGCAGA‑GGTCCGACTATCCGGCGTAACGCCGTAGGGCATGTAA‑CCAAACAAATAGCCGGTCCCCCCCACCCCCCCACGCACTTCATCAAACACCaaaaat > 2:672315/1‑228 (MQ=255) cccccGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCCTCCCGCCCTGCACTCCATCAACCACCaatcat > 1:593463/1‑227 (MQ=255) cacaGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGctgcctcttat > 1:93146/1‑217 (MQ=255) acaGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGAt > 1:480845/1‑227 (MQ=255) gCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGT‑ACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGcac > 1:457853/1‑227 (MQ=255) cAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAg < 1:257935/228‑1 (MQ=255) aggggATTCCCGCCGTGGGTGGACCCGGGCGAACCCGGATGAAACCCGCAAGCAATTTCCGCCGTGGGCAGCATGGCCCTAATCGGGAAGCCGCCGCCTAACGCTTA‑CGCAGA‑GGTCAGAATAGCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGc < 2:32669/225‑1 (MQ=255) agactaTTACCCCCGGGGGGTGAGCCGGGAGACCCAGGATGAAACGCGAAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGc < 2:601951/223‑1 (MQ=255) agGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGCAA‑GCAAACAAATCGCCGGTCCCCCCCATCCCCCACTGCACTTCTTCAAACACCAAAAATGCCTGATGTTGATCGCACACCt > 2:375388/1‑227 (MQ=255) tACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACCGCTCGCGCa > 1:271617/1‑228 (MQ=255) tACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGACCTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCCCACCCCGCCCa > 2:441965/1‑228 (MQ=255) tACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGGAGTGCATGAAA‑GCAAACAAATCGCCGGTCAGc > 1:99569/1‑164 (MQ=255) tACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCCTT‑CGCAGC‑GGTCAGAATAACCGGCGTAACGCCGTATTGCATCAAA‑GCAAACAAATCGCCGATCCGCCCCATCCCGCACTGCACGCCATCAAACACCAATAATCCCTCCTCTTAATCCCACATCCCCCGCa > 2:212434/1‑228 (MQ=255) ccgctgggggTGGAACCGTGAGACCCAGGATGAAGCGCAGAACCATTTTCCGCCGTGGTCAGCATGGCGCTAAGCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATCTCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCaa < 2:504481/219‑1 (MQ=255) gccgTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGAgcgccagg > 1:601951/1‑212 (MQ=255) gTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACACTTACCGCAAGCCCTg > 1:505349/1‑228 (MQ=255) tagtggggaCCGTGAGAACCAGGAGTAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCCGTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGccc < 2:593463/217‑1 (MQ=255) aCCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGT‑ACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCCCACTGCACTTCATCAAAAACCAACAATGCCTGATGTTGACCGCACAGCCCGCGCAAGCCCTCCAAAAAcac > 2:41978/1‑225 (MQ=255) tGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCCCTAATCGGGAAACCGCCGCCTAACGCTTT‑AGCAGA‑GGTCAGAATATCCGGGCTAACGCCGTCGTCCATGTAA‑CCAAACAAGTCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAACACCCACTAAGGCCCGATGTTTATCGCCCAGCTACCGCCAGACCCCCaaaacactagc > 2:98036/1‑220 (MQ=255) ccAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGca < 1:4204/191‑1 (MQ=255) ccAGGATGAAACCGGAAAGCATTTTCCGCCGTGGGCAGCATGGCGCTAACCGGGAAGCCGCCGCCTAACGCTTC‑CGCAGA‑GGGCAGAATTCCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGc < 2:37723/227‑1 (MQ=255) ccAGGATGAAACCCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGc < 1:655000/227‑1 (MQ=255) aGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGAGCCTGTAA‑GCAAACAAATCGCCGTTCCGCCCCATCCCGCACTGCACTTCATCAAACACAAATAATGCCTGATGCTGCTCGCACAGCTCGCCCAAGCCCCCCAAAAAACCTCGCGTCGCTGCCCTCACCCctcc > 2:71705/1‑228 (MQ=255) gcgTGGTCAGCATGGCCCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGa < 1:641851/224‑1 (MQ=255) ccgTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGGTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGa < 1:490381/225‑1 (MQ=255) cATGGCGCTAAACGGGAAGCCGCCGCCTAACGCTTT‑CGCAGG‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAaccac < 1:672315/228‑1 (MQ=255) ttgcctctaccGGGACGCCCCCGCCAACCGCTTT‑CGCCAA‑GGTGAGAATACCCCGCCTAACTCCGTCGTGCAATTAA‑GCAAACAAATCGCCGGTCCTCCCCATCCCGCCCTGCACTTCATCAAACACCAATAATGCCGGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAaccacca < 2:243373/218‑1 (MQ=255) tggggttAATCGGGAAACCGCCGCCTAACGTCTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAaccacca < 2:5530/222‑1 (MQ=255) tGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGGCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAaccacca < 1:375388/228‑1 (MQ=255) gggCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAaccacca < 1:656370/227‑1 (MQ=255) cgcTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGT‑ACGCCGGAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCg < 1:41978/227‑1 (MQ=255) gcTAAGCGGGAACCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAAGATCCGGCGTAACGCCGTAGTGCATGGAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACGTCATCAAACACCAATAATGCCGGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCTCCACCg < 2:166875/227‑1 (MQ=255) tAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGca < 1:295391/227‑1 (MQ=255) tAATCGGGAAGCCCCCGCCTAACGCTTT‑CGCAGA‑GGGCAGAATACCCGGCGTAACGCCGGAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAACCTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGca < 1:98036/227‑1 (MQ=255) tAAGCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGca < 1:53618/227‑1 (MQ=255) aTCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGccca > 1:393170/1‑227 (MQ=255) gAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGAATGTAA‑GCAAACAAATCGCGGGTCAGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACACCCCTGCCCCTGGATCGCACCAACCACCACCGCACAGgagt > 1:57859/1‑227 (MQ=255) accccccgccTAACGCTTTGCGC‑GA‑GGTCAGGATCTCCCGCGTAACGCCGTAGTTCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCCCTTCAACAAACACCAATAATGCCTGATGTTGAGCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTAGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGa < 2:19118/222‑1 (MQ=255) aGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGa < 1:441965/227‑1 (MQ=255) cTAACGCTTT‑CGCAGA‑GCTCAGAATACCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAACACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGATcatccatc < 1:71705/227‑1 (MQ=255) cttccgaaaa‑gGTCCGAAAGTCCGGCGT‑ACGCCGTAGGTCATGTAA‑GCAAACAAACCGCCGGTCCCCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCttt < 2:457853/219‑1 (MQ=255) t‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCa < 1:506958/228‑1 (MQ=255) ggAATATCCGGGGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCCCCGGTCCGCCCCCTCCCGCACTGCACTTCATCAAACCCCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGgaga < 1:212434/227‑1 (MQ=255) ccGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCCCCGCCCAGGTGTGACCCTCCATCCCCGCTTTACCTCCACGGAAATCGCTaa > 2:112736/1‑228 (MQ=255) ccGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGCTCGTTaa > 1:579559/1‑228 (MQ=255) ccGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCCGGATCGGCTCAACCACCACCGCACAGGGGTGGTCATCCCTCACCGCTTTCACTGCCCGGAAATCGCTaa > 2:479189/1‑228 (MQ=255) | ATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCT‑TCCAGCACTTCAGGGGTAT‑TGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAA > NC_000913/3489218‑3489663 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |