| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,638,228 | A→G | 23.5% | E196G (GAG→GGG) | pitA → | phosphate transporter, low‑affinity; tellurite importer |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,638,228 | 0 | A | G | 23.5% | 85.8 / 3.9 | 55 | E196G (GAG→GGG) | pitA | phosphate transporter, low‑affinity; tellurite importer |
| Reads supporting (aligned to +/- strand): ref base A (17/22); new base G (9/5); total (28/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.24e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTT > NC_000913/3638001‑3638463 | ctctCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTTTGATTTTCTTGCTGGCTTGCTCCCGGAGCGGGACCA‑AAAAACGCCCCCCGTTCCCCCTGACCCCACCCGGGCGGGaaacaa > 1:960190/1‑236 (MQ=255) tcATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAaaagaaa < 1:388284/238‑1 (MQ=255) aTTGGCGCGATCATCGGGTTTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAGTATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGCTTTTTTTGCTTCGTCGCTACTGGGTCGGGCCCACAGAAACGCCCCGGTACCCCCCTTA‑CCCAACGGGGCGGGAAAAGAAAAACgggcaaaa > 2:388284/1‑233 (MQ=255) aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGCTGCACTCAATATCCCGACAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTTTGCTTTTCTTTCTGCGTAGCTACCGGAGCGGCCCCC‑AGAAACGAGCCCGATTCCACCCGACCCCAACGGCCGGTGAAAAGAAAGTAGGCCAGaa > 1:920955/1‑239 (MQ=255) aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAACGAATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCTGCCTGTCGTTTGCTGGCGGTCTGCTTTTCTTGTCTCGCCGTTTCTGTAGCGGCCCAA‑CGAAAACCCCCCGTATCCACCTGACCCCCCCGGGACCTCAAAAAAAAAACCACAAGaa > 2:868721/1‑239 (MQ=255) aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTTTTGTTGCGTCGCTACTGGAGCGGCACCA‑AGAAACCCCCCCGGATCCCCCTGACCCCAGCGGGGCGTGGAAACAAAGACGGCAAGaa > 1:610860/1‑239 (MQ=255) aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGGGCGGCACCC‑AGAAACGCGCCCGTATCCACCCGACCCCAACGGGGCGTGAAAAGAAAGACgcacaaaa > 1:1012590/1‑232 (MQ=255) aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAACGGGCCCC‑AGAAACGCGCCCGTATCCACCTTACCCCAGCGGAGCGTGAAAAGAAAACAGGCAAGaa > 1:558317/1‑239 (MQ=255) gggTTTGTTTTACCCAGTGGTTTGAGGCCCGGGGCGGCGGTGTGTGATGCCCTCACTATCCCGAAAGTTTTAATTTTTTTCGGTTCTCTTATCGTTTCCCCGATTGTCGGCCTGTGGTTCGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCCCCTGACCCCAGCGGGGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTg < 2:1012590/239‑1 (MQ=255) ttGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGAGGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGAc < 1:241893/238‑1 (MQ=255) ttGGTTTAACCAAGGCGTTGATGCCCGGGCCGTCAGTGGGGGATGCACTCAATATCCCGAAATTATTAAGTTTTTTCGTTTCTTTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTCCTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGCCCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGAc < 2:719891/238‑1 (MQ=255) tGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTTCTGCGTCGCTACTGGAGCGGCACCC‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGGGCGTGGAAAGAAAAACGGGAAGAAAAAACCGCCGTTTCGGAccg > 1:549952/1‑237 (MQ=255) tttacccgttGCTTTGGTTACGGGGAGGTGAGGGTTGGATGCACTAATTTGCCCGAATGTATTGAGTATTTTCGGTTTTCTGATCGTTTCCCCTATGGTCGGCCTGGTGTTTGCGGGCGGTCTGATTTTCTTGCTGCGTCGCTCCTGGGGCGGCACCA‑AGAACCGCGCCCGTATCCACCTGCCCCCATCGGAGCGTGAAAAGAAAGCCGGCAAGAAAAAGCCGCCGTTCTGGACGCGTa < 2:484127/230‑1 (MQ=255) tttAACCTGTGTGGTTATGACGGGGTCTTCGGTGGTTGATGCTCTCAATAACCCGAATGTATTAAGTATTTTCGTTTCTCTGATCGTTCCCCCTATTGGCGGCCTGGTGTTTGCTGGCGGTCTGATTTCCTTGCTGCGTCGCTACGGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTa < 2:460695/239‑1 (MQ=255) tttAACCAATGGGTTGATGCCCGGGCCGGTAGTGGTGGATGCACTCAATATCCCGAAAGTTTTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTa < 1:975727/239‑1 (MQ=255) aCCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTTTTGCTGCGTAGCTCCTGGGGAGGCACCC‑AGAAACGCGCCCGGATCCACCGTGCCCCCTCGGAGCGCGAAAAAAAAAACGGCAAGAAAAAACCGCCCTTTTggcagcgcgttgt > 2:566084/1‑228 (MQ=255) aCCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGGGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCACCGGGGCGTGAAAAGAAAAACGGCAAGAAAAAACCGCCCTTCTGGACGCGGATTg > 1:719891/1‑238 (MQ=255) tGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTTTCCCGTCGCTCCTGGCGCGGCACCC‑AGAAACGCGCCCGTATCCACCTCACCCCAGCGGAGGCAGAAAAGAAAGACGGCAAGAAAAAACAGCCGCTCTGGGCGCGGATTgggccg > 2:810793/1‑236 (MQ=255) tGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGGATCCACCTGACCCCCGCGGAGCGTGAAAAGAAAAACGGCAAGAAAAAGCCGCCGTTCTGGACGCGGATTGGGCTGa > 1:502833/1‑239 (MQ=255) gatgaCCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCCCTCCTGGGGCGGCCCCA‑AGAAACGCCCCCGTATTCCCCCTACCCCACCGGGACGGGAAAAGAAAAAAGGACAGGAAAAACCACCGCTCCGGACCCGTATTgccataacacct > 2:313096/1‑228 (MQ=255) gggACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCCCCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGGGAAAAGAAAGACGGCAAGAAAAAACCGCCGTTCTGGGCGCGTATTGCGCTGATCCTTTCCGCTa > 1:943735/1‑238 (MQ=255) gATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGGATTGCCCTGATCCTTTCCGCTATCGGCGGGGGGgttt > 1:262501/1‑238 (MQ=255) cACGCAATACCCGAAAAGTATGAGTTTTTTTCGGTTCTCTGACCGTTTCCCTTATGGTCGGCCTGGTGTTTGCGGGCGGTCTGATTTTCTTGCTGCGGCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGCCCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCa < 1:810793/238‑1 (MQ=255) aagtattaagtattTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGGGCGTGAAAAGAAAGACGGCAAGAAAAAACCGCCGTTCTGGACGCGGATTGCGCTGATCCTTTCCGCTATCGGCGGGGGGGTTTGCCACGGCGGGGACCATGGt > 1:178802/1‑239 (MQ=255) gttgttgcGGTTCTTGTATCGTTTCCCTTTTTGCCGGCCTGGTGTTTGCGGGCGGTTTAATTTTCTGTCGGGCTCCGTACGGGGGCGGCACAA‑AGAACCGCGCCCGTATCCCCCTGTCCCCAGCGGAGCGGGAAAAGAAAGCCGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGc < 2:943735/232‑1 (MQ=25) ccGGTTTTCTGATCGTTTCCCCTTTTGTCGGCCTGGTTTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCCCCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGt < 1:727954/238‑1 (MQ=255) tctcTGCTCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTTTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCCCCTGCCCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGt < 1:611450/239‑1 (MQ=255) tctGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAACCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTTCGCTATCGGCGTGGCGGTTTTCCACGGGGCGCACCGTGGTCGAGAAGGCAATTGGCTGGttt > 1:1000873/1‑238 (MQ=255) gtctttttCCCTTATTGGCGGCTGGGGTTTTGGGGGCGGTCCTTTTTTCTTGGCGCGTCGCTCGGGGGGGGCCACCA‑AAAAACGCCCCGTTATCCACCTGCCCCGAGCGGAGCGTGAAAAGAAAGACGGAAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATg < 2:107938/233‑1 (MQ=25) ggcGGCCGGGTGTTTGCGGGCGGTTGGATTTTCTGGCTGCGTCGCTACGGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGGGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGt < 1:168397/237‑1 (MQ=255) gTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCCCTATCGGCGTGGGGGTTTCGCCCGGCGCGAACGAAGGTGCGAAAGGGATTGGTGTGGTTTTGTTGGGattgatctgtt > 1:107938/1‑233 (MQ=255) tttttttgtGGCGGTCTGTTTTTTTTGTTGGCTCGCTACGGGGGCGGCCCCA‑AGAAACGCCCCCGTATCCCCCTGACCCCAGCGGAGGGTAAAAAGAAAGACGGAAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCcagc < 2:1000873/231‑1 (MQ=37) cGGTTTGATTTCCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGCCGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCgtg < 1:755303/238‑1 (MQ=255) tgcGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCCGAAAGGCa > 2:613669/1‑171 (MQ=255) tgcGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCa < 1:613669/171‑1 (MQ=255) cgcgcgACGGGAGGGGCCACA‑AAAAACCCCCCCGGACCCACCGGACCCCAGGGGAGCGTGAAAAGAAAGACGGAAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCGTGGTGAACATGAATGCCACTgg < 1:424197/236‑1 (MQ=37) ggctcgtGGGGCGGCAACA‑AAAACCCCGCCCGTATCCCCCTGACCCGAGGGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCGTGGTGAACATGAATGCCACTGGCt < 1:190554/232‑1 (MQ=38) ggAGCGGCACCA‑AGAAACCCGCCGGTACCCCCCTGACCCCAGCGGGGGGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCGTGGTGAACATGAATGCCACTGGCTACGAAATc < 1:359585/239‑1 (MQ=255) gCGGCCCCA‑AGAAACGCGCCCTGACCCCCCCGCCCCCAGCGGGGGGTGAAAAAAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCGTGGTGAACATGAATGCCACTGGCTACGAAATCac < 2:786059/238‑1 (MQ=38) gCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCGTGGTGAACATGAATGCCACTGGCTACGAAATAacccgt > 1:215960/1‑239 (MQ=255) gCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCAAGGCGCGAACGATGGTCAGAAAAGCCTTGGTCTGGTTATGTTGGtc > 1:151456/1‑172 (MQ=255) cACCA‑AGAAACGCGCCCGTACCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCGTGGTGAACATGAATGCCACTGGCTACGAAATCacccgt < 1:168677/238‑1 (MQ=255) cgcgCCCGTATCCACCTTACCCCAGCGTTCCGCGAAACGAACGCCGGCAAGAAAAAGCCGCCGTTCTGGGCGCGAATTGCGCTGATCCTTTCCGCTATCGGCGTAGCGTTTTCCCCCGAGGCGAGCGGTGGCCCGCACGGCAGTGGGCTCGCTTTTTTGGCATTGTTTTGCGTCCCGCCCCCAGGCC‑TCGCGGGGCACAGTAATTCCCCTGGGTAGGCAACTacccggacccgtcacac > 2:159604/1‑234 (MQ=255) cgcgCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCCCGGCGCGAACGATGGTCAAAAAGGCCTTGGTTGGGTTATTTTGGGATTGCTTGGCTGCGCGCCCTCAGGGTGTCGTGGTGAACA‑GAATGCCCCCTGCCACGAAAAAaccccgaccccggggg > 2:736203/1‑232 (MQ=255) ccccccTTACCCCCCTGCCCCGAGCGGGGCGAGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGcc < 1:789286/236‑1 (MQ=37) cgcCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGGATTGATTTGCTTGCCGCCAGCAGGCT‑TCGTGGTGAACATGAATGCCCCTGGCTCGGAAATCACCCTTACCCGGGGTGcc > 1:206589/1‑238 (MQ=38) ttATCCCCCTGCCCCCAGGGGGGCGGGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATcaac < 1:843975/238‑1 (MQ=255) ccACCTGACCCCAGGGGAGCTGGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACg < 1:580230/239‑1 (MQ=255) aCCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGGCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCGTGGTGAACATGAATGCCCCTGGCTACGAAATCACCCGTACCCCGGATGCCATcaacactgt > 1:401915/1‑234 (MQ=255) cTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGGTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCGTGGTGAACATGAATGCCACTGGCTACGCAATCACCCGTACCCGGGGTGCCACCAAAAACGTCgc > 1:845229/1‑238 (MQ=255) aCCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGGCTGGGTATGTTGGTATTGATTGGCGTCGCGCCCGCAGGCT‑TCGTGGGGAAACTGAATGCCACTGGCTACGGAATAACCCGTACCCCTGATGCCCTCCACAACGTcagagg > 1:76309/1‑234 (MQ=37) aCCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGAATTGGTCTGGTTATGTTGGGATTGATTGGCGTCGCGCCAGCAGGCT‑TCGTGGGGAACATGAATGCCACTGGCCACCAAATACCCCGTACCCGTGATGCCACCCACAAACTCGaa > 1:423306/1‑237 (MQ=38) cccgcgCGGAGCGTGAAAAAAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTACTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGc < 1:670521/233‑1 (MQ=255) ccccAGCGGAGGGTAAAAAGAAAGAGGGAAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGc < 1:313096/238‑1 (MQ=255) ggAGCGTAAAAAAAAAGCCGGCAAAAAAAGGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACttt < 1:135619/238‑1 (MQ=255) | CTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTT > NC_000913/3638001‑3638463 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |