Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 3,090,130 | A→C | 17.4% | T126P (ACC→CCC) | yggI → | Zn‑dependent metalloprotease‑related protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,090,130 | 0 | A | C | 17.4% | 173.6 / 5.4 | 77 | T126P (ACC→CCC) | yggI | Zn‑dependent metalloprotease‑related protein |
Reads supporting (aligned to +/- strand): ref base A (45/15); new base C (2/15); total (47/30) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.56e-06 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CGCCGGAACGGCCTGGCTGGAAAGCTATGAAATTCGCCTCAA‑TCCCGTTTTGCTGTTGGAAAACAGTGAAGCTTTTATTGAAGAAGTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTGCA‑TACCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTA > NC_000913/3089892‑3090365 | cggcgGAACGGCCTGGCTGGAAAGCTATGAAATTCGCCTCAA‑TCCCGTTTTGCTGTTGGAAAACAGTGAAGCTTTTATTGAAGAAGTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAaca < 1:1027281/236‑1 (MQ=255) cgccgGAACGGCCTGGCTGGAAAGCTATGAAATTCGCCTCAA‑TCCCGTTTTGCTGTTGGAAAACAGTGAAGCTTTTATTGAAGAAGTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAaca < 1:733665/239‑1 (MQ=255) aaCGGCCTGGCTGGAAAGCTATGAAATTCGCCTCAA‑TCCCGTTTTGCTGTTGGAAAACAGTGAAGCTTTTATTGAAGAAGTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTCCAATCCGTGCGTCG‑CAACACCTTc > 1:1156586/1‑238 (MQ=255) aaCGGCCTGGCTGGAAAGCTATGAAATTCGCCTCAA‑TCCCGTTTTGCTGTTGGAAAACAGTGAAGCTTTTATTGAAGAAGTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGGGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTc > 1:312897/1‑238 (MQ=255) aaCGGCCTGGCTGGAAAGCTATGAAATTCGCCTCAA‑TCCCGTTTTGCTGTTGGAAAACAGTGAAGCTTTTATTGAAGAAGTGGTACCGCACGAACTGGCACATTTGCTGGAATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGGGCGTCG‑CAACACCTTc > 1:208437/1‑238 (MQ=255) ggAAAGCTATGAAATTCGCCTCAA‑TCCCGTTTTGCTGTTGGAAAACAGTGAAGCTTTTATTGAAGAAGTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGc < 1:1245517/238‑1 (MQ=255) aaGCTATGAAATTCGCCTCAA‑TCCCGTTTTGCTGTTGGAAAACAGTGAAGCTTTTATTGAAGAAGTGGTACCGCCCGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGCAGTGGATGATGGAAAACGTGCTGGGGGTTCCCGCCCGGCGTCACCATCAGTTCGAACTGCAATCTGTCCGTCGCCAACA‑CTTCCCCCACCCCTGCAAgg > 2:1181952/1‑238 (MQ=255) aaGCTATGAAATTCGCCTCAA‑TCCCGTTTTGCTGTTGGAAAACAGTGAAGCTTTTATTGAAGAAGTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGTCGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGCATTGCAATCCGTGCGTCG‑CAAAACCTTCCCCTCCCCCTCCacg > 1:151131/1‑236 (MQ=255) aaGCTATGAAATTCGCCTCAA‑TCCCGTTTTGCTGTTGGAAAACAGTGAAGCTTTTATTGAAGAAGTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCAGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGGGTCG‑CAAACCCTTCCCCAAcccatgaacg > 1:411395/1‑230 (MQ=255) aggaaTTCGGCGCAATTCCAGTTTGGCT‑TTGGAAAAAAGGGAAGGTTTTGATTAAAATGGGGTACCGAACGAACTGGCCAGTTTGGTGGTATGTAAACATCTCGGCCGCGTAGCGGCACATGGCAAAGAGTGGAAGTGGATGATGGAACGCGTGCTGGGTGTTCCCGCCCGTCGTACGCAGCGGTGCGAACTGCAATCCGTGCGTCG‑CAACACATTCCCCTACCGCTGCAAGTGCCAgg < 2:971507/236‑1 (MQ=255) aTTCGCCTTAA‑TCCTGTTTTTCTGTTGGAAAACATTGAAGCTTTTATTGAAGAAGTGGTACCGGACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGGCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCa < 2:618773/239‑1 (MQ=255) aTTCGCCTCAA‑TCCCGTTTTGCTGTTGGAAAACAGTGAAGCTTTTATTGAAGAAGTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCa < 1:829234/239‑1 (MQ=255) aTTCGCCTCAA‑TCCCGTTTTGCTGTTGGAAAACAGTGAAGCTTTTAGTGAAGAAGTTGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCa < 1:40380/239‑1 (MQ=255) ttCGCCTCAA‑TCCCGTTTTGCTGTTGGAAAACAGTGAAGCTTTTATTGAAGAAGTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCAt < 1:317388/239‑1 (MQ=255) cGCCTCAA‑TCCCGTTTTGCTGTTGGAAAACAGTGAAGCTTTTATTGAAGAAGTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCa > 1:902688/1‑239 (MQ=255) ccGTTTTGGTGTTGGAAAACAGTGAAGCTTTGATTGAAGAAGTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCa < 1:938252/213‑1 (MQ=255) tttGGTGTTGGAAAACAGTGAAGCTTTTATTGAAGAAGTGGTCCCGCACGAACTGGCACATTTGCTGGTAGGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTAcgc < 1:439846/238‑1 (MQ=255) cTGTTGGAAAACAGGGAAGCTTTTATTGAAGAAGTGGTACCGCACGACCTGGCACTTTTGCTGGTAGGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCa < 1:299430/239‑1 (MQ=255) gAAGCTTTTATTGAAGAAGTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAACGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGACG‑CAACACCTTCCCCTACCGCGGCAAGTGCCAGGACCATCAGCTGACCGTACGCCGCCATAATCGCGTGGt > 1:128310/1‑236 (MQ=255) aaGCTTTTATTGAAGAAGTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCCCGTAGTTCGt > 1:670663/1‑239 (MQ=255) tttgATTGAAGAAGTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAgg < 1:559502/194‑1 (MQ=255) tttATTGAAGAAGTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGa > 1:1237826/1‑239 (MQ=255) gagaagTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGCAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACCCCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCCGCTTACCGTACCCCCCCAACATCGCGTAATTCGTGGCGAGGCCGTc > 2:127200/2‑239 (MQ=255) aagaagTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGAGGATGATGGAAAACGCGCTGGGTGTTCCCGCCCGTAGTACGCATCAGTTCGAAGTGCAATCCGTGCGTCG‑CAACACCTTCCCCTCCCGCAGCAAGTGCCAGGAGCATCCGCTTACCGTACGCCCCCAAAACCACGTAGTTCGGGGCGAGGCCGTc > 2:501696/1‑239 (MQ=255) agaagTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCAAGGAGCATCAGCTTACAGTACCCCGCCATAATCGCGTAGTTCGTGGCGGGGCCGTc > 1:1236020/1‑238 (MQ=255) gggaCCGGACGACCTGGCACATTGGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGAAAAGAGTGGAAGTGGATGATGGAAAACGGCCTGGGTGTCCCCCCCCGTCGTACGCATCAGTTCGAACTGCAATCCGGGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGc < 1:851477/235‑1 (MQ=255) gTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAaca < 2:979866/151‑1 (MQ=255) gTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAaca > 1:979866/1‑151 (MQ=255) aCCGCACGAACTGGCCAATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCAAAGGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTCCCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCtgt < 1:188891/238‑1 (MQ=255) ccggcagtGGCACATTTGGGTGTAGGAAAACTTTGCGGCCGTGTAGCGCCACAGGGAAAAGGGGTGAAGGGGATGTTGGAAACCGGGCTGGGTGTCCCCGCCCGTCGTCCGCATCGGGTCGAACTGCAATCCGTGCGTCG‑AACCACCTCCCCCTACCGCTGCAAGTGCCAGGAGCACCAGCTTACCGTCCGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCa < 2:929641/232‑1 (MQ=255) cACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGGGGCCGTCTATCGCTGTGTTc > 1:1176318/1‑238 (MQ=255) cACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCCAGGCCGTCTATCGCTGTGTTc > 1:1281376/1‑238 (MQ=255) aCTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTTTGTTCCC‑TG‑Cg > 1:1273339/1‑239 (MQ=255) ttGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCa > 1:899904/1‑148 (MQ=255) ttGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACa > 1:65943/1‑236 (MQ=255) ttGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGGAGTTCGTGCCGAGGCCGCCTATCGCTGTGTTCAC‑TG‑CGGTGacaagcc > 1:1110328/1‑233 (MQ=255) ttGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAACCGCGTACTTCGTGGCGAGGCCGTCTATCCCTGTGTTCAC‑TG‑CGGTGAACa > 1:496520/1‑236 (MQ=255) ggTATGGAACCATTTCGGCCGCGTAGCCCCACAAGGCAAAGAGTGGAAGTGGATGATGGAAACCGTGGTGGGTGTTCCCGCCCGTCGTCCGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CACCCCCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCTTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGtt < 1:564104/238‑1 (MQ=255) aTGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGGGTGGAAGGGGATGAGGGAAACCGGGCTGGGTTTCCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACCCCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCg < 1:346434/238‑1 (MQ=255) aTTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATCATCGCGGAGTTCGTGCCGAGGCCGTCCATCCCTGTGTTCAC‑CT‑CTGAGAACCGCTGGTTGCGAAAAAAca > 2:54543/1‑237 (MQ=255) aTTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACACCCGGTTGCGAAATAACCa > 1:842892/1‑239 (MQ=255) aTTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCCCTGGGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAAcc > 1:600053/1‑238 (MQ=255) gCCGCGTAGCGCCACCTGGCAAAGAGTGGAAGTGGATGATGGCAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCCTCAGCTTACCGTACGCCGCCCTAATCGGGGATTTCGTGGCCGGGCCGCCCATCGCTGTGCACAC‑TT‑CCGCGAATACCTGGTGGCGAAAAAACAGTCT‑Gaa > 2:281237/1‑239 (MQ=255) gCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGTGGAACAGCTGGTTGCGAAATAACCATCT‑Ga > 1:954238/1‑238 (MQ=255) gCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCCCTGTGTTCCC‑TC‑CGGGGAAAAGACGGTGGGGAAAAAAACATCT‑Gaa > 2:1173190/1‑239 (MQ=255) gcgggtggcgcCACATGGAAAAGAGTGGAAGGGGATGATGGAAAACGTTCTGGGTGTTCCCCCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACCCCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑Gaa < 1:72542/231‑1 (MQ=255) cgTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAAAAGCTGGTTGCGAAATAACCATTG‑GAACTa > 1:679922/1‑238 (MQ=255) aaGGGTGGAAGTGGATTATGGAAAACGGGCTGGTTGTTCCCCCCCCTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCC‑CAACCCCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGAt < 1:823922/238‑1 (MQ=255) agagTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTACCCCTTTGTTCAC‑TC‑CGGCGAACACCTGGTGGCGAACTAA‑CAGCTGGAACATACAGGAACTTTCCTGATcg > 2:635215/1‑238 (MQ=255) tggaagtggaTGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTTTGTTCCC‑TG‑CGGTGAACAGCTGTGTGGGAAATAACAACCT‑GAACAATCAGGAACTTTCCGGACCTGGcg > 2:1045906/1‑238 (MQ=255) gggagtggaTGAGGGAAAGCGTGCTGGGTGTCCCCGCCCGTCGTACGCATCGGTTCGAACTGCAATCCGTGCGTCG‑CAACCCCTTCCCCTCCCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCt < 1:635215/235‑1 (MQ=255) gaagtggaTGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACACCTGGTTGCGCAATAACCATCT‑GAACATTCAGGAACTTTCCGGACTTGGCGGa > 1:316274/1‑239 (MQ=255) aagtggaTGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGCCTgct > 1:151363/1‑237 (MQ=255) aagtggaTGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGGGAACAGCTGGTTGCGAAAAAACCTCCT‑GAACTATCCGGAACTGTCCTgcctgtcttttt > 1:251839/1‑228 (MQ=255) ggagagtgGAAAACTTGCTGGGTTTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACCCCTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTg < 1:1186471/231‑1 (MQ=255) ggaTGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCCATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGCTCTGGCTGATTGCa > 1:558819/1‑239 (MQ=255) gatgatGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCACGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCACACAAGCGCTGTG‑TCACATG‑CGGGGAAAGCCTGGTGTGGAAAAAACCAACT‑GACCAATCGGGAACTTTCCTAGTCTGGCCTATTGTA‑t > 2:611302/1‑239 (MQ=255) gatgatGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCCTCCGCTTACCGTACGCCGCCATAATCCCGTAGTTCGTGGCGAGGCCGCCTATCGCTCTGTCCAC‑TGACGGT‑CACAGTGGGTGGCGAAAAAACCATCC‑GAACTTTCAGGAACATTCCTAATACGGCTGacgcaga > 2:559070/1‑233 (MQ=255) tgGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCCC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTGCA‑TACCaa > 1:604760/1‑239 (MQ=255) tgGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTGCA‑TCCCaa > 1:1022692/1‑239 (MQ=255) aaCGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTGCA‑TACCaacaaa > 1:746949/1‑234 (MQ=255) gCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCt > 2:1282040/1‑146 (MQ=255) gCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCt < 1:1282040/146‑1 (MQ=255) gCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCCTCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTGCA‑TCCCAAAACAACTTTc > 1:236626/1‑239 (MQ=255) gtTCCCGCCCGTCGTACGCATCAGTTCGAACTGCCATCCGTGCGTCG‑CACCACCTTCCCCTACCGCTGCAAGGGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTCGTTCGTGGCGACGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAGTAACCATCT‑GTACAATAAGGAACTTTCCTGATCTGGCTGATTGCA‑TACCAAAAAACCTTTCCCTACGt > 2:919531/1‑239 (MQ=255) cccgcccgTCGTACGCATCAGTTCGAACTGCTATCCGTGCGTCG‑CATCACCTTCCCCTACCGCTGCAAGTGCCACGAGCATCAGCTTACCGTACGCCGCCATCATCGCTTAGATCGTCGACATGCCGTCTATCGCTGTGTTCCC‑TC‑CGTGGAACATCTGGTCACGGCATAAACTTCA‑GAACCATCGGGAGATTTCCTACACTCGCTGA‑TGCATTACCCAAACACCTTTCAATCCGTTGc > 2:187960/1‑239 (MQ=255) ccgTTGTACGGATCATTTGGAACTGCAATCCGGGCGGCG‑CACCCCCTGCCCATACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTGCA‑TACCAAAACAGCTTTCGCTACGTTGCTGGCt < 1:281237/239‑1 (MQ=255) ccgTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACCCCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTGCA‑TACCAAAACAGCTTTCGCTACGTTGCTGGCt < 1:54543/239‑1 (MQ=255) cgtcgtACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTGCA‑TACCAAACCAGCTTTCGCTACGTTGCTGGc > 1:299167/1‑237 (MQ=255) caccAGTTCGAACTGCAATCCGTGCGTCC‑CAACCCCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTGCA‑TACCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAaca < 1:586513/236‑1 (MQ=255) caacAGTTCAAACTGAAAGCCGGGCCTCG‑CAACCCCTCCCCCTACCGCTGAAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTGCA‑TACCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAaca < 1:933698/236‑1 (MQ=255) aTCATTTCGAACTGCAATCCGTGCGTCG‑CAACCCCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTGCA‑TACCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAacac < 1:1173190/239‑1 (MQ=255) ttCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTGCA‑TACCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGt > 1:360809/1‑239 (MQ=255) ttCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGACCGTCTCTCGCTGTGTTCAC‑TG‑CGGCGAACAGCTGGTTGCGAACTAACCATCT‑GAACTATCGGTAACTTTCCTGACCTGGCTGATTGCC‑TACCCAAACAACCTTCCCACCCTTGCTGGCCCGTTTTAacagcgtgg > 2:54904/1‑233 (MQ=255) ttCGAACCGCAATCCGGGCGCCC‑AAACCCCTTCCCCTACCGCTGCAAGTGCCTGGAGCATCAGCTTACCGTCCGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTGCA‑TACCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGt < 1:1237617/239‑1 (MQ=255) tCGAACTGCAACCCGGTCGTCG‑CAACCCCTTCCCCTACCGCTGAAAGTGCCAGGAGCATCAGCTTCCCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTGCA‑TACCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGt < 1:1045906/238‑1 (MQ=255) cGAACTGCAATCCGTGCGGCG‑CAACACCTTCCCCTCCCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTGCA‑TACCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGTaa < 1:1181952/239‑1 (MQ=255) cGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTGCA‑TACCAAAACAGCTTTCGCTACGTTGCTGGGCCGTTTTAACACGGGGTAAGGGATGTAcgtt > 1:955762/1‑236 (MQ=255) gCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTGCC‑TACCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGTAAGGGATGTACCGTTAt > 1:1291562/1‑239 (MQ=255) aaCCCCTTCCCCTCCCGAAGCAAGGGCCAGGTGCATAACATTCACGTACGCCGCCATAACCGCGTAGTTCGGGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGGTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTGCA‑TACCAAAACAGCTTTCGCCACGTTGCTGGCTCGTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTa < 1:1118382/239‑1 (MQ=255) aaCCCCTCCCCCTTCCCTTGAAAGTGCCAGGGACATCAGCTTCCCGTCCGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGGCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTGCA‑TACCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTa < 1:1259148/239‑1 (MQ=255) | CGCCGGAACGGCCTGGCTGGAAAGCTATGAAATTCGCCTCAA‑TCCCGTTTTGCTGTTGGAAAACAGTGAAGCTTTTATTGAAGAAGTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCG‑CAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCAC‑TG‑CGGTGAACAGCTGGTTGCGAAATAACCATCT‑GAACTATCAGGAACTTTCCTGATCTGGCTGATTGCA‑TACCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTA > NC_000913/3089892‑3090365 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |