| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,206,438 | G→A | 19.4% | intergenic (‑182/‑25) | ttdR ← / → ttdA | transcriptional activator of ttdABT/L‑tartrate dehydratase, alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,206,438 | 0 | G | A | 19.4% | 90.2 / 4.6 | 50 | intergenic (‑182/‑25) | ttdR/ttdA | transcriptional activator of ttdABT/L‑tartrate dehydratase, alpha subunit |
| Reads supporting (aligned to +/- strand): ref base G (6/32); new base A (2/7); total (10/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CAGACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAG‑CAACAGGCAGTGAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGAC > NC_000913/3206208‑3206657 | tttCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CAGACAAAT‑Ac < 1:68724/239‑1 (MQ=255)ttgctccctgTAACTGCAAGTCTTTGGCTAAAGGCCAGGTATTCAGCATCGTTTATTATCCGCCGTTGTGATAAGGGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTTTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGGAGTTTGTGGCGG‑TGAATTTTTC‑CAGACAAAT‑Ac < 2:141636/230‑1 (MQ=255) tctcctgtcacTGCAAGTTTTTGGCATAAGGGCAGGTTTTCAGGAGTGTTAATTATCCGCAGTTTTGATAAGGCGAGTTTAGTTCGCAAAACATTGCCAGTCCCTGCTCTGGCGCAATATTCATTCTTATTTGCGCGTTGACTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CAGACAAAT‑ACaaa < 2:65876/229‑1 (MQ=255) aCCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTAATTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAAATTTTA‑CACTCAaaa‑aaaaaaa > 1:1112574/1‑239 (MQ=255) tACCTGCAAGTCTTTGGCTAAAGTCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGAGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCCATATTCATTCTTATTTTCGCGTTGATTCCCGAACTTTTAATTCAATATTACCGGCGCCAAAAATTTTAAAACACC‑ATTTTATGGTGATATTTTGTGAGGG‑TGCATTTTCC‑CA‑AAAAAA‑ACaaaaaacatg > 2:559609/1‑234 (MQ=255) tACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTT‑CAGCACAAT‑Aaaaaaaaacaa > 1:789733/1‑234 (MQ=255) aCCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CAGACAAAT‑ACAAAAACTGGAg < 1:907732/239‑1 (MQ=255) cTTTGGCTAAAGGCCAGCTATTCAGCATCGGTAATTATCCGCAGTTGTTATAAGCGCAGTGTATTTCGTAAAACAGTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CAGACAAAT‑ACAAAAACTGGAGTTGCC‑atg < 1:112481/237‑1 (MQ=255) tGGTTAAAGGCCAGCTTTTCAGCATCGTTAATTATCCCCATGTGTGAAAAGCGCAGTGTATTTCGGAAAACATTGCCATTCCCTGCTCTTGCGCAATATTCATTCTTATTTGCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CAGACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAg < 2:525281/239‑1 (MQ=255) tGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CAGACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAg < 1:1085298/239‑1 (MQ=255) tAAAGGCCAGCTATTCAGCCTCGTTAATTATCCGGAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CAGACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGa < 1:777638/238‑1 (MQ=255) tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CAGACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGa < 1:752292/238‑1 (MQ=255) tAAAGGACTACTATTCAGCATCGTTAATTATTCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACTGTGCCATTCCCTGCTCTGGCGCAATATTCAGTCTTATTTGCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTG‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CAGACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGa < 2:764225/238‑1 (MQ=255) aaTTTTCCGCAGTTGTGATAAGCGCAGTTTTTTTCTGAAAACATTGCCCTTCCCTGCTCTGGCTCAATATTCATTCTTATGTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CAGACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAG‑CAACAGGCAGTGAATa < 2:33148/239‑1 (MQ=255) ttttttcccatttGTGAATAGCGCTTGGTATTTCGCAAAACATTGCCACTCCCTGCTCTGGGGCAAGATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CAGACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAG‑CAACAGGCAGTGAATaa < 2:725053/228‑1 (MQ=255) aTTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CAGACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAG‑CAACAGGCAGTGAATaa < 1:450741/239‑1 (MQ=255) ccGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGGAATTTTT‑CAGACCAAA‑AAAAAAAATAGAGTTGCC‑ATGATTGGCGGAAGGAATAAGACAAAAGACAGTGAaaaattga > 1:765516/1‑235 (MQ=255) aGCGCAGTGTATTTCGCAAAACAGTGCTATTCCCTGCTCTGGCGAAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CAGACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAG‑CAACAGGCAGTGAATAAGT‑TGACAGAGATTGTCGCt < 1:638722/239‑1 (MQ=255) aGCGAAGTGTATTTCGCAAACCATTCGCATTCCCTGCTTGGGCGCAATATTCATTCTTATTTTCGGGTTGATTCACGAACTTTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGGGGCGG‑TAAATTTTTC‑CAGACAAAT‑ACAAAAACTGGAGTTGCC‑AGGATGAGCGAAAGTAATAAG‑CAACAGGCAGTGAATAAGT‑TGACAGAGATTGTCGCt < 1:559609/239‑1 (MQ=255) attgtTTTTCGCAAAACATTGCCATTCCCTGCTCTTGCGCAATATTCATTCTTATTTTGGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGAAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CAGACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAG‑CATCAGCCAGTGAATAAGT‑TGACAGAGATTGTCGCTAACt < 1:579773/236‑1 (MQ=255) tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTT‑TCAACAACA‑ACAAAAACATGAATTGCC‑ATGGTGAGCGAAAGGAAAAAA‑AAAAAGACAGAGAAAAAAA‑TGACAACAAATTTCGCTAACATTACccccccaatatctac > 2:1024431/1‑227 (MQ=255) cttgttctGGCTAAATTTTCATTCTTATTTCCGCGTTGATTCCCGACCGTTTAATTACATATTCACGGTGGAAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGGGG‑TAAATTTTCC‑CAAACAAAT‑ACAAAACCTGGAGTTGCA‑ATGATGAGCGAAATTAATAAG‑CAACAGGCAGTGAATAAGT‑TGACAGAGATTGTCGCTACCTTTACCGCCATGATTTCTACCCGAATGcc < 1:85648/234‑1 (MQ=255) ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTT‑CCAACAAAA‑AAAAAAACAGGAGTTGCC‑ATGATGAGCGGAAGAAATAAA‑CAACAAGCAGGGAATAAGA‑TGACAAAGGTTGTTGCTAACTTTACCGCCATGATTTTTTCCCCAACGccccat > 1:1125536/1‑235 (MQ=255) ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑GGAATTTTTT‑CAGACAAAA‑AAAAAAAAAGGAGGTGCC‑CTGTTGAGGGGAAGAAATAAA‑CAACAAGAAGTGAATAAAT‑TGTCAGAGGTTGTTGCGAACTTTACTGCCCTGAGTTCTACCCCAAAACCtgat > 1:890630/1‑239 (MQ=255) gcAATATTCATTCTTATTTGCGAGTTGATCCACGAACTGTTAATTACATAGTCACGGTGGAAAAAAATAAAAAACCGC‑ATTTT‑TGGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CAGAAAAAT‑AAAAAAACGGGAGTTGCC‑ATGATGAGCGAAAGAAAGAAG‑CAACAGGCAGTGAATAAGT‑GGAAAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtg < 1:98986/238‑1 (MQ=255) tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑GTAATTTTTT‑CAGACAAAT‑AAAAAAAATAGAGTTGCC‑ATGATTAGCGGAAGTAATAAA‑AAAAACGCAATGTAAAAAA‑TTAGAGAGATTTTTGCCAAATTTTCCGCCACGAGTTTTATCCGCATACCCCATTAACAGGGGGGTAAACTaaaa > 1:276076/1‑239 (MQ=255) caaatttttAATTACATATTCAGGGGGGAAAAAAATAAAAAACCAA‑ATTTT‑TAGGGGTATTTTGGGGCGG‑TGATTTTTAC‑CAGACAAAT‑AAAAAAACGGGAGTTGCC‑ATGATGAGCAAAAGTAATAAG‑CAACAGGCAGTGAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGaa < 1:975898/232‑1 (MQ=255) aaTTAAATATCCACGGTGGAAAAAAATATAAACCCAC‑ATTTT‑GAGGGGGAGTTGGTGGCGG‑TGATTTTTTC‑CAGACAAAA‑AAAAAATCTGGAGTGACC‑ATAAGGAGCAAAAGTAATAAG‑CAACAGGAAGTAAATAAGT‑GGACAGAGTTTGTCGCTATTTTTACCGCCATGATTTCTTCCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGtcgtcg < 1:1063473/239‑1 (MQ=255) attaattatTCCCGGTGGCAAAAAATATAAAACCAC‑TTTTT‑TAGGGGTAGTTTGGGGCGG‑TGAATTTTTC‑CAAAAAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAG‑CAACAGGCAGAGAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGa < 1:966527/233‑1 (MQ=255) tACATATTCGCGGTGAAAAAAAATAAAAAACCAA‑TTTTT‑TAGTGGTAGTTTGGGGCGG‑TGAATTTTTC‑CACAAAAAT‑CAAAAAACTGGATTTGCC‑ATGATGAGCGAAAGTAATAAG‑CAACAGGCAGTTAAAAAGT‑TGAAAGAGATTTTCGCTACTTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATg < 1:956107/239‑1 (MQ=255) ttgtCACGGGGGAAAAAAATAAAAAACCAC‑ATTTT‑TAGTGTTAGTTTGGGGCGG‑TAAATTTTTC‑CAGACAAAA‑ACAAAAACGGGATTTGCA‑ATGAGGAGCGAAAGAAATAAG‑CAACAGGCAGTGAATAAGT‑TGACAGAGATTGTCGATAACTTTTCCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa < 1:134118/236‑1 (MQ=255) tatTCGCGGGGACAAAAAATATAAAACCAC‑ATTTT‑TAGGGGTATTTTGTGGCGG‑TAAATTTTTC‑CAGACAAAT‑ACAAAAACGGGAGTTGCC‑ATGATGAGCAAAAGTAATAAG‑CAACAGGCAGTGAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa < 1:884414/239‑1 (MQ=255) tatTCAGGGTGGAAAAAAAAATAAAACCAC‑ATTTT‑TGGTGGAAGTTTGTGGCGG‑TGAATTTTTC‑CAGACAAAT‑AAAAAACCTGGATTTGCC‑ATGAGGAGCGAAAGAAATAAG‑AAACGGGTAGGGAATAAGT‑TGAAAGAGATTGCCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa < 1:1120739/239‑1 (MQ=255) atTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTT‑CAGACAAAT‑ACAAAAAAATGAGTTGCC‑ATGATGAGCGGAAAGAATAAA‑CAACAGGCAGTGAATAAGA‑TTGCAAAGATTGTCGCTAACTTTACCGCCACGATTTTTTCCCCAATGCCCGATGACGGTGTGGGTAAACTAAAACAACTAAAAGATGCCGCAACGACGTCGATggggga > 1:816373/1‑237 (MQ=255) atTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTT‑CAGACAAAT‑ACAAAAAAAGGAGTTGCC‑ATGATGGGGGGAAGGAAAAAG‑CAAAAAGCCGGGAATAAAT‑TGACAAAGAATGTTGCTTACCTTTCCCCCCTGATTTTTACCCCAAAGCCTGATGACGTGGGGGGGAAAATAAAACAACTAAAGGATACCCAAACGACCTCGCTggggga > 1:385551/1‑237 (MQ=255) gggtggaaaaaaaaTAAAAAACCAA‑TTGTG‑TAGTGGGTGTTTGGGGGTG‑ATAATTTTCC‑CAAACAAAT‑AAAAATAAGGGATGTGCA‑AGAATGGACAAAATAAATAAG‑AAACGGGTAGTGAAAATGT‑TGACAGAGTTTGTCGTTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAAtt < 2:741636/231‑1 (MQ=255) agggTGGAAAAAAATA‑AAAACCACAATTTT‑TAGGGGTATTTTGGGGCGG‑TAAATTTTCC‑CAGACAAAT‑ACAAAAAGTGGAGTTGCC‑ATGATGAGGGAAAGTAATAAG‑CAACAGGAAGTAAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATACCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAAtt < 1:1229995/237‑1 (MQ=255) ggTGGAAAAAAATAAAAACCCAC‑ATTTT‑TGGTGGTTGTTTGGGTCGG‑TTAATTTTCC‑CAAAAAAAT‑AAAAAAACTGGATTTGCC‑ATGATGAGCAAAAGTAATAAG‑CAACAGGCAGTAAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt < 1:484054/239‑1 (MQ=255) gtagaaaaaaaTAAAAAACCCC‑ATTTT‑TAGTGGAAGTTTGTGGCGG‑TGAATTTTAC‑AAGAAAAAA‑AAAAAAACTGGAGTTGCC‑AGGATGAGCAAAAGTAAAAAG‑CAACAGGCAGTAAATAAGT‑TGACAGAGTTTGTCGGTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt < 1:515855/233‑1 (MQ=255) gggaaaaaaaTAAAAACCCAC‑ATTTT‑TAGTGGTAGTTTG‑GGCGGTTGATTTTTAC‑AAGAAAAAT‑CAAAAAACGGGGTTTGCC‑ATTATGAGCGAAAGTAATAAG‑CACCAGGAAGTGAAAAAGT‑TGACGGGTATTGTGGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt < 1:418404/233‑1 (MQ=255) aaaaTAAAAACCCCT‑ATTTT‑TGGTGTTATTTTGGGGCGT‑GTAATTTTTC‑AAGAAAAAT‑ACAAAAACTGGAGTTGCC‑TTGAGGAGCGAAAGTAATAAG‑CAACAGGCAGTTAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATa < 1:696782/239‑1 (MQ=255) aaaTATAAAAAATC‑ATTTT‑TGTTGTTTGTTTTTGGGGG‑GTAAATTTTC‑CAAACAAATAAAAAAAAGTGGGGTGACC‑ATGGGGAGGAAAAAAAAAAAG‑ACACGGACAGTAAATAAGT‑GGAAAGAGATTGCCGCTATTTTACCCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATa < 2:385551/239‑1 (MQ=255) aaTATAAACCCAC‑TTTTT‑TATGGTTATTTTGGGGCGG‑TGATTTTTCC‑CAGACAATG‑AAAAAACCGGGAGTTCCC‑AGGAGAAGGAAAAGTAATAAG‑CAACAGACTGTGATTAAGT‑GGACAGATATGGCGGTTACCTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg < 1:517384/239‑1 (MQ=255) aaTAAAAAACAAA‑ATTTG‑TAGGGGTAGTTGGTGGCGG‑TGAATTTTCA‑CAGAAAAAT‑ACAAAACATGGGGTGGCC‑ATGAGGAGGGAAAGTAATAAG‑CAACAGGCAGTTAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg < 1:969570/239‑1 (MQ=255) aGTGGTAGTTTGGGGCGG‑TGAATTTTCC‑CAGACAAAT‑ACAAAAACTGGATTTGCC‑AGAATGAGCAAAAGTAATAAG‑CAACAGGCAGTGAATAAGT‑TGAAAGAGATGGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt < 1:828842/210‑1 (MQ=255) aGTTTGTGTGGG‑TAATTTGTTC‑CAGAAAAAT‑AAAAAAATGGTGGTTGCA‑AGGAGGAGCGAAAGAAAGATC‑AAAATGTCGGTGAAAAGGTGTGA‑AGTGTTTGTCGCAATGTTTCCCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa < 2:276076/239‑1 (MQ=255) aGTTTGGGGCGG‑TAAATTTTTC‑AAAACAAAT‑ACAAAAACTGGAGTTGCA‑AGGAGGGGCAAAAGTAATAAG‑CAACAGGAAGTAAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa < 1:925957/239‑1 (MQ=255) gTTTGGGGCGG‑TAAATTTTCC‑GAAAAAAAT‑ACAAAAACGGGATTTGCC‑AGGAAGAGCAAAAGTAAAAAG‑CAACAGGAAGTGAAAAAGT‑TGAAAGAGTTTGCCGATAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGAt < 1:893312/239‑1 (MQ=255) gtgGCGG‑TGAATTTTTC‑CAGAAAAAT‑ACAAAAACTGGAGTTGCC‑ATGAGGGGGAAAAGTAATAAG‑CAACAGGAAGTGAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGAc < 1:1024431/239‑1 (MQ=255) ggggCGG‑T‑AATTTTTCACAGAAAAAC‑A‑AAAAACTGGTATTGCCAATGAGAGGCAAAAGTAATAAG‑CAACGGGCAGGAAATAAGT‑TGACGGGGATGGCCGTTACTTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGAc < 1:1181739/237‑1 (MQ=255) | TTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CAGACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAG‑CAACAGGCAGTGAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGAC > NC_000913/3206208‑3206657 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |