New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4460313	50 (1.310)	3 (0.080)	3/274	5.3	6.0%	coding (52/465 nt)	nrdG	anaerobic ribonucleotide reductase activating protein
	?	NC_000913	= 4460324	45 (1.220)					coding (41/465 nt)	nrdG	anaerobic ribonucleotide reductase activating protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TACGAGTGTCATTCAGATCGTTAATGATCTGGTCTTCCATTGCTTTGGTAAATGGCTGACCGGAATTTACCCGCCATGTGCTTTTGTTATAGCAACCGGGGCATTCATGAACACACCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAA  >  NC_000913/4460175‑4460455                                                                                                                                            |                                                                                                                                                tACGAGTGTCATTCAGATCGTTAATGATCTGGTCTTCCATTGCTTTGGTAAATGGCTGACCGGAATTTACCCGCCATGTGCTTTTGTTATAGCAACCGGGGCATTCATGAACACACCCGGAGACAAACAGGGTGCAAC‑GAGTg                                                                                                                                             >  1:238779/1‑143 (MQ=255) tACGAGTGTCATTCAGATCGTTAATGATCTGGTCTTACATTGCTTTGGTAAATTGCTGACCGGAATTTACCCGCCATGTGCTTTTGTTATAGCAACCGGCGCATTCATGAACACACCCGGAGACAGACAGGCTGCAAC‑GAgag                                                                                                                                             >  2:61111/1‑141 (MQ=255)       tgtCATTCAGATCGTTAATGATCTGGTCTTCCATTGCTTTGGTAAATGGCTGACCGGAATTTACCCGCCATGTGCTTTTGTTATAGCAACCGGGGCATTCATGAACACAACCGGAGACAAACAGGGTGCAAC‑GAGTGCCgggg                                                                                                                                       >  1:187152/1‑143 (MQ=255)       tgtCATTCAGATCGTTAATGAACTGGTATTCCATTGCTTTGATAAATGGCTGACCGGAATTTACCCGCAATGTGCTTTTGTTATAGCAACCGGGGCATTCATGAACACACCCGGAGACAAACAAGGAGCAAC‑GAGTGACgagg                                                                                                                                       >  2:229541/1‑143 (MQ=255)        gtCATTCAGATCGTTAATGATCTGGTCTTCCATTGCTTTGGTAAATGGCTGACCGGAATTTACCCGCCATGTGCTTTTGTTATAGCAACCGGGGCATTCATGAACACACCCGGAGACAAACAGGGTGCAAC‑GAGTGCAGGGGc                                                                                                                                      >  2:99242/1‑143 (MQ=255)           aTTCAGATCGTTAATGATCTGGTCTTCCATTGCTTTGGTAAATGGCTGACCGGAATTTACCCGCCATGTGCTTTTGTTATAGCAACCGGGGCATTCATGAACACAACAGGAGACAAACAGGGTGCAAA‑GAGTGCCGGGGCCGt                                                                                                                                   >  1:355985/1‑143 (MQ=255)            ttCAGATCGTTAATGATCTGGTCTTCCATTGCTTTGGTAAATGGCTGACCGGAATTTACCCGCCATGTGCTTTTGTTATAGCAACCGGGGCTTTCCTGAACACACCCGTAGACAAACACGGTGCAAC‑GAGTGCCGGGGCCGtt                                                                                                                                  >  1:588808/1‑143 (MQ=255)                gATCGTTATTGATCTGTTCTTTCATTGCTTTGGTAAATGGCTGACTGGAATTTACCCGGCATGGGCTTTTGTTATAGCAACCGGGGCATTCATGAACACACCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACg                                                                                                                              <  1:678052/143‑1 (MQ=255)                     ttAATGATCTGGTCTTCCATTGCTTTGGTAAATGGCTGACCGGAATTTACCCGCCATGTGCTTTTGTTATAGCAACCGGGGCATTCATGAACACACCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGCCGCTggc                                                                                                                         >  2:160969/1‑141 (MQ=255)                        aTGATCTGGTCTTCGTTTTCTTTGTTAATTTGTTGATCTGTATTTACCCGCCATGTGCTTTTGTTGTGGCAACCCAAGCGCAAATGCAAACACTCTGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGAc                                                                                                                      <  1:729997/143‑1 (MQ=255)                        aTGATCTGGTCTGCCATTGCTTTGGTAAATGGCTGACCGGAATTTACCCGCCATGTGCTTTTGTTATAGAAACCGGGGCATTCATGAACACACCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGAc                                                                                                                      <  2:687218/143‑1 (MQ=255)                              tGGTCTTCCATTGCTTTGGTAAATGGCTGACCGGAATTTACCCGCCATGTGCTTTTGTTATAGCAACCGGGGCATTCATGAACACACCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATa                                                                                                                >  1:563926/1‑143 (MQ=255)                                gTCTTCCATTGCCTTGGTAAATGGCTGACCGGAATTTACCCGCCATGTGCTTTTGTTATAGCACGCGGGGCATTCATGACCACACCCGGAGACAAACAGGATGCAAC‑GAACGACGGGGCCGTTGAGGATCTCGAAAGCATatt                                                                                                              >  2:486129/1‑141 (MQ=255)                                      cATTGCTTTGGTGAATGGCTGACCGGAATTTACCCGCCATGTGCTTTTGTTATAGCAACCGGGGCATTCATGAACACACCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGCCGATGTCGGCCGGCTAGTACttgt                                                                                                        >  1:697887/1‑140 (MQ=255)                                        ttGCTTTGGTAAATGGCTGACCGGAATTTACCCGCCATGTGCTTTTGTTATAGCAACCGGGGCATTCATGAACACACCCGGAGACAAACAGGGTGCATC‑GAGGGCCGGGGCCGTTGACGATGTCGACAGGATAGTACtgatga                                                                                                      >  1:164314/1‑143 (MQ=255)                                        ttGCTTTGGTAAATGGCTGACCGGAATTTACCCGCCATGTGCTTTTGTTATAGCAACCGGGGCATTCATGAACACACCCGGAGACAAACAGGGT‑CAACACGGTGACGGGGCCGTTGACGATGTCGACAGGATCGTActgctgc                                                                                                      >  2:148368/1‑142 (MQ=255)                                            tttGGTAAATGGCTGACCGGAATTTACCCGCCATGTGATTTTGTTATAGCAACCGGAGCATTCATGAACACACCCGGAGACAAACAGGGTGCAAA‑GAATGCCGGGGCCGTTGAAGACGACGACAAGATAGTACtgacgagaca                                                                                                  >  2:310610/1‑139 (MQ=255)                                                     tGGCTCACTGGAATTTACCCGCCATGTGCTTTTGTTATAGCAACCGGGGCATTCATGAACACACCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTAttt                                                                                         <  2:44678/143‑1 (MQ=255)                                                      ggCTGACCGGAATTTACCCGCCATGTGCTTTTGTTATAGCAACCGGGGCATTCATGAACACACCCGGAGCCAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACTATGACGACAGGATAGTACTGATGATAATTCACAATTTc                                                                                        >  1:415272/1‑143 (MQ=255)                                                             cGGAATTTACCTTCCATGTGCTTTAGTTATAGCAACCGGGGCATTCATGAACACACCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGc                                                                                 <  1:137027/143‑1 (MQ=255)                                                                       ccGCCATGTGCTTTTGTTATAGCAACCGGGGCATTCATGAACACACCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTcc                                                                      >  2:59818/1‑143 (MQ=255)                                                                         accATTTTCTTTTGTTATAGCAACCGGGGCAGTCAGGAACACACCCGGAGACAAACAGGGTGCAAC‑GAGCGCCGGGGCCGTTGCCGATGTCGACAGGATAGTACTGATGATAATTCATTATTCCGCCTGGCTTAT‑CAGTCcgc                                                                    <  1:694901/142‑1 (MQ=255)                                                                           cctgtgCTTTTGTGATAGCAGCCGGGGCATTCATGATCACACCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCgt                                                                  <  2:160653/141‑1 (MQ=255)                                                                                 cTTTTGTTATAGCAACCGGGGCATTCATGAACACACCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGTTGGTAATCCATTATTTCGCCTGGCTTAT‑CAGTCCGCGCGTAGGc                                                            >  2:709767/1‑143 (MQ=255)                                                                                    ttGTTATAGCAACCGGGGCATTCATGAACACACCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGc                                                         >  2:369327/1‑143 (MQ=255)                                                                                               aCCGGGGCATTCATGAACACACCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTAATc                                              <  2:187152/143‑1 (MQ=255)                                                                                                  ggggCATTCATGAACACACCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAAGCTGCATCCGGTAATCAAt                                           >  1:681115/1‑143 (MQ=255)                                                                                                    ggCGTTCATGAACACAACCGGAGACAAACAGGGTGCAAC‑GAGTGCCGTGGCCGTTGACGATGTCGACAGGATAGTACTGAGGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGc                                         <  2:74973/143‑1 (MQ=255)                                                                                                    ggCATTCCGGATCACCCCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGc                                         <  2:563926/143‑1 (MQ=255)                                                                                                    ggCATGCAGGACCACGGCCGGAGACAAACGGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCGGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGc                                         <  1:160969/143‑1 (MQ=255)                                                                                                       aTTCATGAACACACCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTAATCACTGCCtc                                      >  2:688779/1‑142 (MQ=255)                                                                                                       aTTCATGAACACACCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCAGTTGACGATATCGACAGGATAGTACTGATGATAATTCATGATTACGCCTGGGTTAT‑CAGTCCCGGTGTCGGATAGAACCGACAATCAATcccag                                      >  2:38468/1‑141 (MQ=255)                                                                                                        ttaattaaCACACTCGGCTACAAACAGGTTGCAAC‑GATTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGa                                     <  1:295350/137‑1 (MQ=255)                                                                                                        ttCATGAACACACCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGAAGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCGTGGCTTAT‑CAGTCCGCGTGTAGGCTGTATTCGGTAATCTATgtttgt                                     >  2:311444/1‑138 (MQ=255)                                                                                                          cATGAGCACACTCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGGTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATg                                   <  1:369944/143‑1 (MQ=255)                                                                                                             taaCACACCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGTGCCGTTGACGATGTTGACTGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGa                                <  1:514490/142‑1 (MQ=255)                                                                                                                 acacCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGACTGCATCCGGTAATCAATGCCTGATGCGACGCt                            <  1:667014/143‑1 (MQ=255)                                                                                                                  ctcccGGCGACAAACGGGGTGCAAC‑GAGTGCCGGGGGCGGTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTg                           <  2:415272/141‑1 (MQ=255)                                                                                                                   acCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTTATCAATGGCTGATGCGAGGCTGt                          >  2:451269/1‑143 (MQ=255)                                                                                                                    tctgtagaCAAACAGGGTGCAAC‑GAGTGCCGGGGCCGCGGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTc                         <  1:309801/138‑1 (MQ=255)                                                                                                                    cccGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTACTCAATGCCTGCTGCGCTGCTGTc                         >  1:661363/1‑143 (MQ=255)                                                                                                                      cGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTAATCTATGCCTGATGCGGCGCTGTcgc                       >  1:71186/1‑143 (MQ=255)                                                                                                                        gagaCAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCTGTAATCAATGCCTGATGCGACGCTGTCGCGt                     <  1:465794/143‑1 (MQ=255)                                                                                                                         agaCAAACAGGGTGCAAC‑GAGGGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTc                    <  1:473439/143‑1 (MQ=255)                                                                                                                         agaCAAACAGGGTGAAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTc                    <  2:132053/143‑1 (MQ=255)                                                                                                                          gaCAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCCCGGCt                   >  2:1716/1‑143 (MQ=255)                                                                                                                             aaaCAGGGTGCAAT‑GAGTGCCGGGGCCGTTGACGATGTCGAGAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTAt                <  1:421089/143‑1 (MQ=255)                                                                                                                               aCAGGGTGCATC‑GTGGGCCGGGGCCGTTGACGATGTCGACAGGATAGGACTGATGATAATTCATTATTGCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTAATCCATGCCTGATGCGACGCTGTCGCGTCTTATCa              <  2:298945/143‑1 (MQ=38)                                                                                                                               aCAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTAACTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCa              >  1:98494/1‑143 (MQ=255)                                                                                                                                cAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCAGGTAATCAATGCCTGATGCGACGCTGTCGCGAGTTATCAg             >  2:548206/1‑143 (MQ=255)                                                                                                                                            gAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGCTAGTTATCGCCTGCGCCTGGGTTTTGGAGT‑ATCCCCCACGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACATGGAGCaa  >  1:533887/1‑143 (MQ=12)                                                                                                                                            |                                                                                                                                                TACGAGTGTCATTCAGATCGTTAATGATCTGGTCTTCCATTGCTTTGGTAAATGGCTGACCGGAATTTACCCGCCATGTGCTTTTGTTATAGCAACCGGGGCATTCATGAACACACCCGGAGACAAACAGGGTGCAAC‑GAGTGCCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTAT‑CAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAA  >  NC_000913/4460175‑4460455

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.