New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 39468248 (0.120)6 (0.090) 5/280 9.4 15.2% intergenic (+5/‑48) rrfC/aspT 5S ribosomal RNA of rrnC operon/tRNA‑Asp
?NC_000913 = 4040681 59 (0.870)intergenic (+45/+225) rrfA/mobB 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTG  >  NC_000913/4040540‑4040796
                                                                                                                                             |                                                                                                                    
gtCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTa                                                                                                                     <  1:196953/143‑1 (MQ=35)
   ccACCTGACCCCATGCCGAACTCAGACGTGAAACGCCGTAGCGCCGATGGTAGCGTGGGGTATCCTCATGCGATGGTAGGGAACTGCCAGGCATCAAATAAACCGAAAGGCTCAGACGGCAGACTGAGCCTTTCGTTGTAGCt                                                                                                                  >  2:182906/1‑143 (MQ=11)
        tGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACGGCCAGGCATCAAATAATACGAAAGGCTCAGTCGGAAGACTTGGCCTTTCGTTTTATCtgttgt                                                                                                             <  1:558430/143‑1 (MQ=255)
        tGACCCCATGCCGAACTCAGAAGCGAAACGCCGCAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCtgttgt                                                                                                             <  1:42165/143‑1 (MQ=25)
                  ccGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGATCAGTCGGAAGACTGGGCCTTTCGCTTTATCTGTTGTTTGTCGGTGa                                                                                                   >  2:550714/1‑143 (MQ=21)
                        tCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGctc                                                                                            >  2:117405/1‑143 (MQ=35)
                        tCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGctc                                                                                            >  1:641651/1‑143 (MQ=35)
                        tCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGctc                                                                                            >  1:927161/1‑143 (MQ=35)
                          aGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGTACGCtctc                                                                                          >  1:27892/1‑143 (MQ=21)
                          aGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAGCGCtctc                                                                                          >  1:236663/1‑143 (MQ=25)
                          aGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTGTTATCTGTTGTTTGTCGGTGAACGCtctc                                                                                          >  1:661925/1‑143 (MQ=25)
                          aGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTAGTTTTATAAGTTGTTTGTCGGTGAACGCtctc                                                                                          >  1:379377/1‑143 (MQ=255)
                            atgTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGTATCTAATAAAACGAAAGGTTCTGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCt                                                                                        <  2:1089898/141‑1 (MQ=255)
                            aaGTGAATCGCCGTTGCTCAGATGGTGGTGTGGCGTCTCCTGATGCGAGAGTAGGGAACTGCCAGGCATCAGATATAATGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCt                                                                                        <  2:897330/143‑1 (MQ=11)
                            aaGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCt                                                                                        >  1:602676/1‑143 (MQ=35)
                               tgggaCGCCGGAGCGGCGAGGGTAGTGTAGGGTCTCCTCGGGCGGGAGTAGGGACCTGCGAGGCATCAACTGAAACGAGAGGCTCAGTCGGAAGACTGGGCCTTTCGTGTTATCTGTGGTTTGTCGGTGAACGCTCTCCTGAg                                                                                     <  2:210419/139‑1 (MQ=11)
                               tGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTgtg                                                                                     >  2:99420/1‑141 (MQ=25)
                               tGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAg                                                                                     >  2:174598/1‑143 (MQ=35)
                                gcacccccGCAGCGCCGTTCGCAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAACACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGt                                                                                    <  2:317256/137‑1 (MQ=11)
                                ataaCGCCTTAGGTTCGATGTTAGTGTATGGGCTCATCAAGTGAGAGTAGGGAACTGCCAGGCATCAAATAAACGGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGt                                                                                    <  1:281272/141‑1 (MQ=11)
                                 aaaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAGCGCTCTCCTGAgca                                                                                   >  1:201026/1‑141 (MQ=25)
                                 aaaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAAATAAAAGGCGGCGATATATACGAAAGGCTCAGTCGGAAGACTCGGCCTTTAGATTTATCCGTTCTCTGTCGACGAACGCTACCCTGAgca                                                                                   >  2:500640/1‑141 (MQ=2)
                                   aCGCCGTAGCGCCGGTGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAACGGCTCAGTCGGAAGACTGGGCCTTTCGTGTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAgg                                                                                 <  1:1059759/143‑1 (MQ=255)
                                   aCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAgg                                                                                 >  2:660045/1‑143 (MQ=34)
                                     gCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAGAACGAAAGGCTCAGTGGGAAGACTGGGCCTTTCGTTTTGTCGGTTGTTTGTCGGTGACGCGTCTCCTGGGGAGGAc                                                                               >  1:620827/1‑143 (MQ=11)
                                         tAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAAt                                                                           <  1:396613/143‑1 (MQ=35)
                                         tAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAAt                                                                           >  1:374691/1‑143 (MQ=35)
                                               cGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATccgccg                                                                     <  1:254834/143‑1 (MQ=35)
                                               cGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTAGGTGAACGCTCTCCTGAGTCGGACAAATccgacg                                                                     >  1:597947/1‑143 (MQ=255)
                                               cGATGGTAGTGTGGGGTCTCCTCATGCGAGAGAAGGGAACTGCCAGGCGTCAAATAAAACGAAGGGCTCAGTCGGAAGACTGGGCCTATCGTTTTATCTGTTGTTTGTCGCTGAATGACCTCCGTAGTATGTCAAATgcgccg                                                                     >  2:178596/1‑143 (MQ=11)
                                                  ttgTAGTGTGGGCCCTCCTGATGCGAGAGTAGGGAACCGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGa                                                                  <  2:230437/141‑1 (MQ=255)
                                                          tgGTGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGAttt                                                          <  1:56256/143‑1 (MQ=25)
                                                            gggTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACACATCCGCCGGGCGCGGATTTGa                                                        >  2:177744/1‑143 (MQ=25)
                                                            gggTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGa                                                        >  1:778200/1‑143 (MQ=35)
                                                             ggTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTGTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGGCAAATCCGCCGGGAGCGGATTGGaa                                                       >  1:830546/1‑143 (MQ=255)
                                                              gTCTCTTCATGCGATAGTAGGTAACTGCCAGGGATCAAATAAAACGAGAGGCTCAGTCGGAAGACTGTGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAAc                                                      <  2:482894/143‑1 (MQ=11)
                                                                   ctcATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGc                                                 >  2:326630/1‑143 (MQ=33)
                                                                      aTGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTTTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGaa                                              <  1:174598/143‑1 (MQ=17)
                                                                      aTGCGAAAGTAGGGAACGGCCAGGCATAAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGATTTATATGTTGTTTGTCGGTGAACGCTCTCCTCAGTAGGCCAAATCCGCCGGGAGCGTATTTGAACGTTGCGaa                                              <  1:984880/143‑1 (MQ=11)
                                                                               tggggAACCGCCGGGAGTCAAATAGAATGAGGGGCTCAGGCTGAAGACTGGGCCTTTCGTTTTATCTGCTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGcc                                     <  2:594936/141‑1 (MQ=11)
                                                                               tAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGcc                                     >  2:206489/1‑143 (MQ=32)
                                                                                 gggAACGGCCAGGCAGCAACTAAAACGGGAGGCTCAGTGGGAAGCCTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATACGCCAGTAGCGTATTTGAACGTTGCGAAGCAACGGCCCg                                   <  2:689776/143‑1 (MQ=11)
                                                                                  ggAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCgg                                  >  1:407320/1‑143 (MQ=32)
                                                                                  ggAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGCAGCGCATTTGAACGTTGAGAAGCAACAGCCCgg                                  >  2:411790/1‑143 (MQ=255)
                                                                                   gAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCCCCTGGAGAGGCCAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCCGa                                 >  2:167287/1‑143 (MQ=11)
                                                                                     aCTGCCAGGCATCAAATAAAACGAAAGGCTCGGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCAGGacg                               >  2:1200215/1‑141 (MQ=12)
                                                                                       tGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAgggg                             >  2:903235/1‑142 (MQ=17)
                                                                                       tGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATCTGACCGTTGCGAAGCAACGGCACGGCgggc                             >  2:556926/1‑142 (MQ=255)
                                                                                        gCCAGGCATCACATAAGACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCGCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGTCCGGAGGGTg                            <  2:676977/143‑1 (MQ=255)
                                                                                          cAGGCATGAAATAATACGAAAGTGTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGc                          <  2:93820/143‑1 (MQ=255)
                                                                                            gtcATCAAGTAATACTAAAGGCTCAGTCGGGAGACTGGGCCGTTCGTTTTAGCTGTGGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATTCGCCGGGAGCGGATTTTAACGTTGCGAAGCAACGGCCCGGAGGGTGGCgg                        <  1:356610/141‑1 (MQ=11)
                                                                                            gtcATCAAATAAAACGAAATGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCgg                        <  1:356829/141‑1 (MQ=17)
                                                                                              cATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGCGCGGAGTTGAACGTTGCGAAGCCACGGCCCGGAGGGTGGCgggg                      >  1:997278/1‑142 (MQ=12)
                                                                                                tCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGCGGCGGGCAg                    >  1:538838/1‑143 (MQ=17)
                                                                                                    gtAAAGCGAAAGGCTCAGTCGGGAGACTGGGCCTTTCGTTGTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAcg                <  1:507534/142‑1 (MQ=12)
                                                                                                       aaaCGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAcgccc             >  2:133935/1‑143 (MQ=32)
                                                                                                       aaaCGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAcgccc             >  2:962905/1‑143 (MQ=32)
                                                                                                               ggCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGCGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGGGGCGGGCAGGACGCCCGGCagaca     >  2:1125294/1‑139 (MQ=255)
                                                                                                                gCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAAc    >  1:694466/1‑143 (MQ=32)
                                                                                                                  tCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGGAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCGGGACACCCGCCATaacccg  >  2:728234/1‑139 (MQ=255)
                                                                                                                                             |                                                                                                                    
GTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTG  >  NC_000913/4040540‑4040796

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.