New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4542690	62 (0.900)	9 (0.140)	8/266	7.4	11.5%	intergenic (+57/‑425)	fimE/fimA	tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
	?	NC_000913	= 4542986	81 (1.250)					intergenic (+353/‑129)	fimE/fimA	tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAA  >  NC_000913/4542849‑4543127                                                                                                                                          |                                                                                                                                               gACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGcc                                                                                                                                           <  1:99668/143‑1 (MQ=255)  aCGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGccc                                                                                                                                          >  1:643291/1‑143 (MQ=255)       tCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAAt                                                                                                                                     >  1:944704/1‑143 (MQ=255)        cTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATg                                                                                                                                    <  1:489139/143‑1 (MQ=255)        cTTCCACATTCTTATCTACAAAAACCACCTAATGCAATATAAACATATATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGGGTCAAAATGGCCCCAAATg                                                                                                                                    <  2:277071/143‑1 (MQ=255)         ttCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATgg                                                                                                                                   >  2:392525/1‑142 (MQ=255)           ccTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACGATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGttt                                                                                                                                 <  2:291589/143‑1 (MQ=255)               aTTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATACAGATAATACTGGTGTAGTAACCCAACAAATAAAATGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGACCCCAAATGTTTCATc                                                                                                                             >  1:177927/1‑143 (MQ=255)                ttcttcTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAACATGGCCCCAAATGTCTCATCt                                                                                                                            >  2:902871/1‑143 (MQ=255)                 tcttctCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCt‑t                                                                                                                          >  2:181258/1‑143 (MQ=255)                   ttctCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTACTCCTCGAATCATAATGGCCCCAAATGTTTCATCt‑ttg                                                                                                                        >  1:227511/1‑142 (MQ=255)                      tctcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTggg                                                                                                                     <  1:682314/143‑1 (MQ=255)                       cgccAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTgggg                                                                                                                    <  2:657527/141‑1 (MQ=255)                        tcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTggggg                                                                                                                   >  1:548534/1‑143 (MQ=255)                        tcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTAAAAATGGCCCCAAATGTTTCATCT‑TTTggggg                                                                                                                   >  2:1149178/1‑143 (MQ=255)                         ccAAAAACCACCTTAAAAGATATAATCATCGATAAATAAAGATAACAATAGAATATTAAGTCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGa                                                                                                                  <  2:489296/143‑1 (MQ=255)                           aaaaaCCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGaaa                                                                                                                >  1:737171/1‑143 (MQ=255)                            aaaaCCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGaaaa                                                                                                               >  1:1048629/1‑143 (MQ=255)                            aaaaCCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGGTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGaaaa                                                                                                               >  1:1052501/1‑143 (MQ=255)                              aaCCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATCTTAAGACCAGAAATAAACTGAAAAAGTTTGTCCGAGATGCTTTCATCTATGAGTCAAAATGGGCGTAAATGGTTAATCT‑TTTGGGGGAAAACt                                                                                                             >  1:1062990/1‑143 (MQ=255)                                ccaccTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAACGCTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACtgt                                                                                                           >  1:716642/1‑143 (MQ=255)                                 caccTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACtgtg                                                                                                          <  1:896714/143‑1 (MQ=255)                                   ccgcttGCAATATACACATCTATAAATAAAGATGACAATAGAATATTAAGCCCACAAATCAACTGAGAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCa                                                                                                        <  2:1159572/138‑1 (MQ=255)                                   ccTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCa                                                                                                        >  1:379680/1‑143 (MQ=255)                                   ccTCATGCAATATAAACATCTAGAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCa                                                                                                        <  1:119101/143‑1 (MQ=255)                                   ccTCATGCAATATAAACATCCATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAACCTGAAAAAGTTTGTCCGCGATGCTTTCCTCTCTGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCa                                                                                                        <  1:430376/143‑1 (MQ=255)                                     tCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGGTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAGCTGTGCAgt                                                                                                      >  1:685149/1‑143 (MQ=255)                                         gCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTg                                                                                                  >  1:1021147/1‑143 (MQ=255)                                          cAATATAAACATCTATAAATAAAGATAACAATAGAAGATTAAGCCAACAAATAAACTGAAAATGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGGAAACTGTGCAGTGTTgg                                                                                                 >  1:806925/1‑143 (MQ=255)                                             tataAACATCTATAAATAAATATAACGATAGAATATTAAGCCAACAAATAAACTGAAACAGCTTGTCTACTCTGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAg                                                                                              <  1:916637/143‑1 (MQ=255)                                             tataAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAg                                                                                              >  1:1211340/1‑143 (MQ=255)                                             tataAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGGGCAGTGTTGGCAg                                                                                              >  2:232287/1‑143 (MQ=255)                                             tataAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑GTTGGGGGAAAACTGTGCAGTGTTGGCAg                                                                                              >  1:129776/1‑143 (MQ=255)                                                      cTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAACCTCg                                                                                     >  1:362784/1‑143 (MQ=255)                                                       tataAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGt                                                                                    <  1:1032723/143‑1 (MQ=255)                                                            ataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTaca                                                                               >  1:902818/1‑143 (MQ=255)                                                             tcaggATAACAATAGAATATTAAGCCACGAAATAAACTGAAACAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaa                                                                              <  1:761723/139‑1 (MQ=255)                                                             taaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaa                                                                              <  1:207920/143‑1 (MQ=255)                                                               aaGATAACCGTAGAATATTAAGCCAACAAATAAACTGACAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaa                                                                            <  1:107698/143‑1 (MQ=255)                                                                 gATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaaca                                                                          >  1:938797/1‑143 (MQ=255)                                                                   tAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaacaaa                                                                        <  1:132747/143‑1 (MQ=255)                                                                      cAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAgtg                                                                     >  1:432427/1‑143 (MQ=255)                                                                      cAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TCTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAgtg                                                                     >  2:388441/1‑143 (MQ=255)                                                                       aaTAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAgtgt                                                                    >  1:666544/1‑143 (MQ=255)                                                                       aaTAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAgtgt                                                                    >  1:419404/1‑143 (MQ=255)                                                                         tAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTAc                                                                  >  1:899069/1‑143 (MQ=255)                                                                          aGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACa                                                                 >  1:958378/1‑143 (MQ=255)                                                                           gAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAACTGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCCAACTCCTTGACAAAACAAAatggccag                                                                >  2:454435/1‑138 (MQ=255)                                                                            aaTATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCCAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTGCAGa                                                               >  2:541614/1‑143 (MQ=255)                                                                               atTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACg                                                            >  2:1130252/1‑143 (MQ=255)                                                                                    gCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAGCGACCGc                                                       >  2:47637/1‑143 (MQ=255)                                                                                     ccAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAACATTTAATCTGATATGGGGACAACT‑CCTGGCACGCACAGTCAAACTCGTTTACAAAACAAAGTGTACAGCACGACTgac                                                      >  2:554814/1‑141 (MQ=255)                                                                                      caacaaATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGcca                                                     >  2:990429/1‑142 (MQ=255)                                                                                        acaaATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGcccgt                                                   >  2:280942/1‑141 (MQ=255)                                                                                           aaTAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTTAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCGCATGTc                                                >  1:228954/1‑143 (MQ=255)                                                                                                aCTGAAAGAGCTTGTCCGCGATGCTTTCCTCTGTGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGAttt                                           <  2:1062990/143‑1 (MQ=255)                                                                                                aCTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGAttt                                           <  1:623240/143‑1 (MQ=255)                                                                                                  tGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACACAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAg                                         >  1:352012/1‑143 (MQ=255)                                                                                                  tGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAg                                         >  1:931164/1‑143 (MQ=255)                                                                                                     aacaGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGaaa                                      <  1:1228905/140‑1 (MQ=255)                                                                                                     aaaaGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGaaa                                      <  1:1062303/143‑1 (MQ=255)                                                                                                       aaGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGCCAACTGTGCAGTGTTCGCAGTCAACCTCGTTTACAAAACAAACTGTACAAAACAACTGCCAATGACGATTGAGaaaga                                    >  1:607174/1‑141 (MQ=255)                                                                                                       aaGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACCAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATa                                    <  1:181258/143‑1 (MQ=255)                                                                                                       aaGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACACAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATa                                    >  1:770672/1‑143 (MQ=255)                                                                                                       aaGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGTACGACTGACAATTTCGCATCAGAAATa                                    >  2:1006325/1‑143 (MQ=255)                                                                                                          tttGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTCTACAGAACGACTGCCCATGTCGATTTAGAAATAGtt                                 <  1:806388/143‑1 (MQ=255)                                                                                                             gTCCGCGATGCGCTCCTCTCTGAGTCAAATTGCCCCCCAATTTTTCATCT‑TTTGGAGGAAAACTGTGCAGTGGTGGCAGCCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGttttt                              <  1:201535/143‑1 (MQ=255)                                                                                                              tCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACtgtg                                                                                                          <  1:304630/66‑1 (MQ=255)                                                                                                              tCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACtgtg                                                                                                          >  2:304630/1‑66 (MQ=255)                                                                                                                cgcgATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGACCGACTGCCCATGTCGATTTAGAAATAGTTTTTTgc                           >  2:909955/1‑142 (MQ=255)                                                                                                                 gcgATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaa                          <  1:1149178/143‑1 (MQ=255)                                                                                                                  cgATGCTTTCCTCTATGAGTCAAAATGGCCCTAAATGTTTCATCT‑TTTGGTGGAAAACTGTGCAGTGTTGACAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaa                         <  2:94758/143‑1 (MQ=255)                                                                                                                       cTTTCCTCTATGAGTCAAAATGGCCCCATATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaaggaaa                    <  2:333012/143‑1 (MQ=255)                                                                                                                       cTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAACGTGTACAGACCGACTGCCCATGTCGATTTAGAAATAGATTTTTgaaaggaaa                    >  1:56225/1‑143 (MQ=255)                                                                                                                       cTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGCGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaaggaaa                    <  2:35829/143‑1 (MQ=255)                                                                                                                           ccTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGGCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAagcag                >  1:684515/1‑143 (MQ=255)                                                                                                                            ctctATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAagcagc               <  2:958378/143‑1 (MQ=255)                                                                                                                              ctATGAGTCAAAATGGCCACAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTGGGCAGTCAAACTCGTGTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCAt             <  2:261344/143‑1 (MQ=255)                                                                                                                               tATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATg            >  1:851337/1‑143 (MQ=255)                                                                                                                                 tGAGTCAAAATGGCCCCAAATGTTTCCTCT‑TTTAGGGGAGAGCTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGaa          >  1:530909/1‑143 (MQ=255)                                                                                                                                  gAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGaaa         <  2:37768/143‑1 (MQ=255)                                                                                                                                  gAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGATGGCAGTTAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGCTTTAGAAATAGTTTTTTTAAAGGAAAGCAGCATGaaa         >  1:47983/1‑143 (MQ=255)                                                                                                                                         aaTGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTaaaa  >  1:180219/1‑143 (MQ=255)                                                                                                                                          |                                                                                                                                               GACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCT‑TTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAA  >  NC_000913/4542849‑4543127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.