Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,293,032 IS1 (–) +8 bp intergenic (‑110/‑488) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)80 (1.160) 60/284 0.1 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 1293039 0 (0.000)intergenic (‑117/‑488) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 1293032 =0 (0.000)77 (1.110) 64/284 0.0 100% intergenic (‑110/‑495) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

Only 100 of 156 total aligned reads displayed.

TCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACC  >  NC_000913/1292898‑1293180
                                                                                                                                             |                                                                                                                                             
tCAGGATTTTATGGGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGg                                                                                                                                              >  2:134139‑M2/1‑142 (MQ=255)
tCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGCGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGg                                                                                                                                              >  1:632679‑M2/1‑142 (MQ=255)
    ggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTCCCGCCaat                                                                                                                                          <  2:354012‑M1/13‑1 (MQ=255)
     tttttaAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGTGGTATTACTAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGACTGGTAGGAGTTCAACATCCGTCTTTATGTTGTGCCGggtcat                                                                                                                                         <  2:1214658‑M2/142‑7 (MQ=255)
     gcggtgctgttgccgtgacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaata                                                                                                                                         >  1:1139540‑M1/130‑143 (MQ=255)
     aTTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGTCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaat                                                                                                                                         >  1:734759‑M2/1‑137 (MQ=255)
     aTTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaat                                                                                                                                         >  1:485717‑M2/1‑137 (MQ=255)
        gtgcttttgccgttacgcaccagcccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaacaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataaat                                                                                                                                      >  2:621778‑M1/127‑143 (MQ=255)
          aaGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactc                                                                                                                                    >  1:380967‑M2/1‑132 (MQ=255)
           cttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttagcagcatcaccTTGTGCCGCCAATAAATATc                                                                                                                                   <  2:1027365‑M1/20‑1 (MQ=255)
           aGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGCATGCAAGGAGTTCCAACTTGTTCTTTATTTTGTGCCGggtaacgactcc                                                                                                                                   <  1:1041304‑M2/143‑13 (MQ=255)
            ttttgccgttccgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCt                                                                                                                                  >  1:262774‑M1/123‑143 (MQ=255)
            gTGCTTCGCCCATTGTAGTAATCTCACACTTATCTTGGGGTGGTTTGTTGCGGTCATAATAGAACCTTAAATTCCGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgaatcca                                                                                                                                  <  1:451926‑M2/143‑14 (MQ=255)
             tttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCtt                                                                                                                                 <  1:1185825‑M1/22‑1 (MQ=255)
             tGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaa                                                                                                                                 <  2:235318‑M2/143‑15 (MQ=255)
              gCTTCTCTGCTTGTAGTCATCTCAAACTTTTATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCACTAGTCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaac                                                                                                                                >  2:472974‑M2/1‑128 (MQ=255)
              gCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaac                                                                                                                                <  2:521215‑M2/143‑16 (MQ=255)
                  cGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttat                                                                                                                            >  1:62286‑M2/1‑124 (MQ=255)
                   gttacgcaccaccccgtaagtagctgaacaggaggaacagctgatagaaacagaagccactggaacacctccaaaacaccatcatacactaagtcagtaagttggcagcatcaccTTGTGCCGCCAAAAAATAACTTGtcaga                                                                                                                           <  2:34391‑M1/28‑3 (MQ=255)
                    ttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATaa                                                                                                                          <  1:385542‑M1/29‑1 (MQ=255)
                      acgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAACTATGTTTGCaaaaaa                                                                                                                        <  2:924809‑M1/31‑1 (MQ=255)
                        gcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtacgttggcagcaccaccTTGTGCCGCCCATACCTCTCTCTTcacaaactt                                                                                                                      <  2:900328‑M1/33‑4 (MQ=255)
                        gcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAAtt                                                                                                                      <  1:994570‑M1/33‑1 (MQ=255)
                        gcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcaccaccTTGTGCCGCCAATAAATATCTTGTCATAAAAtt                                                                                                                      <  2:856994‑M1/33‑1 (MQ=255)
                         caccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTa                                                                                                                     <  1:731666‑M1/34‑1 (MQ=255)
                            agtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgtt                                                                                                                  >  1:1221194‑M2/1‑114 (MQ=255)
                             gtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttt                                                                                                                 >  2:731231‑M2/1‑113 (MQ=255)
                                ccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAACTTAGCcagca                                                                                                              <  2:963628‑M1/41‑3 (MQ=255)
                                 tcgcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatg                                                                                                             >  1:465300‑M2/1‑109 (MQ=255)
                                  gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCcagacaa                                                                                                            <  1:131986‑M1/43‑4 (MQ=255)
                                  ctcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactcccacttattgatagtgttttatgt                                                                                                            <  1:1005445‑M2/143‑36 (MQ=255)
                                   tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgtgttatggt                                                                                                           <  2:696846‑M2/143‑37 (MQ=255)
                                    cAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttc                                                                                                          >  2:1013695‑M2/1‑106 (MQ=255)
                                    cAAACGTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttc                                                                                                          >  2:1011110‑M2/1‑106 (MQ=255)
                                      gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcg                                                                                                        <  2:1236851‑M1/47‑1 (MQ=255)
                                      aaCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcag                                                                                                        >  1:666624‑M2/1‑104 (MQ=255)
                                           tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCa                                                                                                   <  1:1044013‑M1/52‑1 (MQ=255)
                                           tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCa                                                                                                   <  1:1091006‑M1/52‑1 (MQ=255)
                                            gaacaggagggacagctgatagaaacagaagccactgaagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTATACATAAAATTACCCAGGAAAGACGCAGCat                                                                                                  <  2:379328‑M1/53‑1 (MQ=255)
                                              ttGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCTGGAACGTAAGTAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttactgatagtgttttatgttcagataacgcc                                                                                                <  2:1155234‑M2/143‑48 (MQ=255)
                                              ttGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcc                                                                                                >  1:1096598‑M2/1‑96 (MQ=255)
                                                 ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGc                                                                                             <  1:352458‑M1/58‑1 (MQ=255)
                                                  ggtggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGACGggtaatgactccaactgattgatagtgttttaagttcagataaagcccgtt                                                                                            <  2:539008‑M2/143‑52 (MQ=255)
                                                  ggtgggTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGagtaatgactccaacttattgagagtgttttatgttcagataatgcccgat                                                                                            >  1:240068‑M2/1‑92 (MQ=255)
                                                  gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATATAATTAGCCAGAAAAGACGCGGCATATAGcc                                                                                            >  2:385520‑M1/85‑143 (MQ=255)
                                                  gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCCTATAGcc                                                                                            <  1:192536‑M1/59‑1 (MQ=255)
                                                     ggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATATCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgac                                                                                         >  2:581026‑M2/1‑89 (MQ=255)
                                                       tttGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactt                                                                                       >  1:810604‑M2/1‑87 (MQ=255)
                                                        tggttgcgGTAATAATAGAGTCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCGTTAGTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                      >  2:1064251‑M2/3‑86 (MQ=255)
                                                        cagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAttt                                                                                      <  2:676283‑M1/65‑1 (MQ=255)
                                                         agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTa                                                                                     >  1:450982‑M1/78‑143 (MQ=255)
                                                         agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTa                                                                                     <  1:500654‑M1/66‑1 (MQ=255)
                                                          gttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtgcagataatgcccgatgactttgt                                                                                    <  1:231366‑M2/143‑60 (MQ=255)
                                                            tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTacac                                                                                  >  2:643208‑M1/75‑143 (MQ=255)
                                                             gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACAcc                                                                                 <  1:338482‑M1/70‑1 (MQ=255)
                                                                agaaacagaagccactggagcgcctcaagaacaccatcatacagtaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCgat                                                                              >  2:434950‑M1/71‑143 (MQ=255)
                                                                   atcagaagccagtggagcacgtcaaaaccaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCgatgat                                                                           >  2:331003‑M1/68‑143 (MQ=255)
                                                                    gaatagAGGCTTAAAGTCAGTTGTGCATTAGCCAGGAATGTAAGGAAGTCAAAGTTGTTCTTTATTTTCTGCCGggtaatgtctccgacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc                                                                          >  2:498532‑M2/2‑74 (MQ=255)
                                                                    acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCACATAGCCCTATTTCAACCGATGAtt                                                                          <  2:1251961‑M1/77‑1 (MQ=255)
                                                                       taGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccgc                                                                       <  1:1025239‑M2/143‑73 (MQ=255)
                                                                       taGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                                                                       >  1:1012347‑M2/1‑71 (MQ=255)
                                                                       taGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                                                                       >  1:1214572‑M2/1‑71 (MQ=255)
                                                                       taGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                                                                       >  1:842920‑M2/1‑71 (MQ=255)
                                                                        agagCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTAAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacc                                                                      <  2:380746‑M2/143‑74 (MQ=255)
                                                                         agccactggagcacctcacaacccccatcattcaccacatcattaatgtggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgca                                                                     >  1:401932‑M1/62‑143 (MQ=255)
                                                                             cTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTCTTTTGTGCCCgctaatgacgccaacttattgccagtgttttatgttcagataatgcccgctgactttgtcacgcagctccaccgactt                                                                 <  2:944375‑M2/143‑79 (MQ=255)
                                                                             cTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTGCTTTCTTTTGTGCCGggtaatgactccaacttattgatagtgctttatgttcagataatgcccgatgactttgtcatgcagctaaaccgattt                                                                 <  2:165832‑M2/143‑79 (MQ=255)
                                                                                ggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTg                                                              <  2:866767‑M1/89‑1 (MQ=255)
                                                                                aaaTTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga                                                              >  1:797961‑M2/1‑62 (MQ=255)
                                                                                 aaTTCAGTTGTGCAATAGCCAGGAACGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgag                                                             >  1:540137‑M2/1‑61 (MQ=255)
                                                                                  agcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAg                                                            <  1:599151‑M1/91‑1 (MQ=255)
                                                                                        ttGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca                                                      >  1:235318‑M2/1‑54 (MQ=255)
                                                                                        ttGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca                                                      >  2:372458‑M2/1‑54 (MQ=255)
                                                                                         caaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaaa                                                     >  2:1135770‑M1/46‑143 (MQ=255)
                                                                                                 ccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGa                                             >  1:1157210‑M1/38‑143 (MQ=255)
                                                                                                  catcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAGTAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAGACTTCCTGAt                                            <  1:1195659‑M1/107‑1 (MQ=255)
                                                                                                    tcatacactaaagcagtaagttggcagcatcaccTTGTGCCGCCAATACATATCTTTTCATAAAATTAGCCAGAAACGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTc                                          >  2:620881‑M1/35‑143 (MQ=255)
                                                                                                    cAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTGGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatacagctccaccgactttgagaccgacagcgccttccgtc                                          <  1:829697‑M2/143‑102 (MQ=255)
                                                                                                     aGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcc                                         <  1:1148562‑M2/143‑103 (MQ=255)
                                                                                                          tGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagcc                                    >  1:43402‑M2/1‑36 (MQ=255)
                                                                                                            tAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgt                                  <  1:1174623‑M2/143‑110 (MQ=255)
                                                                                                                 cagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTa                             <  2:918031‑M1/122‑1 (MQ=255)
                                                                                                                   ttCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagcacgacagcgccttccgtccccgccgtgccaggt                           <  1:91644‑M2/143‑117 (MQ=255)
                                                                                                                   gtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATCTAGATCTGGTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATg                           >  1:177214‑M1/20‑143 (MQ=255)
                                                                                                                     cAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgc                         >  1:884635‑M2/1‑25 (MQ=255)
                                                                                                                       aaaTTGTTCTTTATTGTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctg                       >  1:315433‑M2/1‑23 (MQ=255)
                                                                                                                           tGTTCTTTTGGTTGTGCAGagtaattactctcacttattgatagtgttttatgttcagataatgaccgatgacgttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctc                   >  2:696882‑M2/1‑19 (MQ=255)
                                                                                                                           ggagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTACCTGGTTCAGGTTACATTTTATGGGGAGAtt                   >  2:155353‑M1/12‑143 (MQ=255)
                                                                                                                            cagcatccccTTGTGCCGCCCATAAATATCTTTTCATAAAATGAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTa                  >  2:1017790‑M1/11‑143 (MQ=255)
                                                                                                                             ttCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcag                 >  1:103070‑M2/1‑17 (MQ=255)
                                                                                                                              gcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATc                <  1:992388‑M1/135‑1 (MQ=255)
                                                                                                                                 ttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgcctttgtcatgcagctcgcccgattttgagaacgtcagcgacttccgtcccagccttgcaaggtgctgcctaaaaatc             <  1:958062‑M2/143‑131 (MQ=255)
                                                                                                                                  tATTTTGTGCCGggtaatgactccagcttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattca            >  2:463078‑M2/1‑12 (MQ=255)
                                                                                                                                  tATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgaccttgtcatgcagctccaccgagtttgagcacgacagcgacttcaccccccgccgcgccagccgctgcctcaagtcaa            <  2:207181‑M2/143‑132 (MQ=255)
                                                                                                                                   accTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAgg           <  2:438176‑M1/140‑1 (MQ=255)
                                                                                                                                   aTTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcag           >  1:1176191‑M2/1‑11 (MQ=255)
                                                                                                                                     cTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATAGTAGGCt         <  2:658193‑M1/142‑1 (MQ=255)
                                                                                                                                           ccgccAAGACATATCTTCTCATAAAAGTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTgacgac   <  1:625323/143‑1 (MQ=255)
                                                                                                                                            cgccAATAAATATCTGTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGAcc  <  1:534886/143‑1 (MQ=255)
                                                                                                                                            cGggtaatgactccagcttagtgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccg  >  2:228094‑M2/1‑2 (MQ=255)
                                                                                                                                             |                                                                                                                                             
TCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACC  >  NC_000913/1292898‑1293180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.