Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,619,080	Δ35 bp	intergenic (‑172/‑6)	marC ← / → marR	UPF0056 family inner membrane protein/transcriptional repressor of multiple antibiotic resistance

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1619080	1619114	35	73 [0]	[0] 73	marC/marR	UPF0056 family inner membrane protein/transcriptional repressor of multiple antibiotic resistance

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1619079	0 (0.000)	67 (1.010)	53/272	0.2	100%	intergenic (‑171/‑41)	marC/marR	UPF0056 family inner membrane protein/transcriptional repressor of multiple antibiotic resistance
	?	NC_000913	1619115 =	0 (0.000)					intergenic (‑207/‑5)	marC/marR	UPF0056 family inner membrane protein/transcriptional repressor of multiple antibiotic resistance

TCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCT  >  NC_000913/1618939‑1619221                                                                                                                                             |                                                                                                                                               tCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAAct                                                                                                                                              >  1:873683‑M1/1‑141 (MQ=255) tCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAAct                                                                                                                                              >  2:1011213‑M1/1‑141 (MQ=255) tCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAAct                                                                                                                                              >  1:348475‑M1/1‑141 (MQ=255)    gCGAAAAGTACAAGGGGTAAACAAGGATAAAGTGTCACTCTTTTGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAGCGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaat                                                                                                                                           <  2:866573‑M1/143‑6 (MQ=255)     cGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACAGCTTTTCCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatg                                                                                                                                          <  1:639829‑M1/143‑7 (MQ=255)         aaGGATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaa                                                                                                                                      <  1:323796‑M1/143‑11 (MQ=255)           gtgtaaggGGTAAACAAGGATAAAGTGTCTCTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAATCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaa                                                                                                                                    <  2:466011‑M1/140‑13 (MQ=255)           gTATAAGCGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaa                                                                                                                                    <  1:455684‑M1/143‑13 (MQ=255)            tataAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaag                                                                                                                                   >  1:537397‑M1/1‑130 (MQ=255)              taAGGGGTAAACAAGCATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATCCATTTGACTTATACTTGCCTGCGCAAcccatgtgaaaagta                                                                                                                                 >  2:433998‑M1/1‑128 (MQ=255)               aaGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtac                                                                                                                                >  1:628912‑M1/1‑127 (MQ=255)                  gggTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACCTATACTTGCCTGGGCAActaatgtgcaacgtaccac                                                                                                                             >  2:803368‑M1/1‑124 (MQ=255)                      aaaCAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAGCGTGGCATTGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgat                                                                                                                         <  1:292521‑M1/143‑24 (MQ=255)                       aaCAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTCGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccaacgatc                                                                                                                        >  2:584934‑M1/1‑119 (MQ=255)                       aaCAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGACTGGGCAActaatgtgtcaagtacccgcgatc                                                                                                                        >  1:198023‑M1/1‑119 (MQ=255)                       aaCAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAACAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATCCTTGCCTGGGCAActaatgtgaaaagtaccagcgatc                                                                                                                        >  2:220454‑M1/1‑119 (MQ=255)                               tAAAGTGTCACTATTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTCGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtacaagcgatatgttcaat                                                                                                                >  2:343087‑M1/1‑111 (MQ=255)                                   gtgtCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaa                                                                                                            <  1:168091‑M1/143‑37 (MQ=255)                                      tcgctctttaGCTAGCCTTGCATCGCAGTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaatta                                                                                                         <  2:783761‑M1/140‑40 (MQ=255)                                      tCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaatta                                                                                                         >  2:490998‑M1/1‑104 (MQ=255)                                      tCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaatta                                                                                                         >  1:972294‑M1/1‑104 (MQ=255)                                      tCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaatta                                                                                                         <  1:1165694‑M1/143‑40 (MQ=255)                                        aCTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattatt                                                                                                       >  2:674707‑M1/1‑102 (MQ=255)                                         ctctTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattgttc                                                                                                      >  1:241107‑M1/1‑101 (MQ=255)                                         ctctTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattc                                                                                                      <  1:1209981‑M1/143‑43 (MQ=255)                                             ttAGCTAGCCTTGCATCGCATTGAACAAAATTTGATCCGATTTAGCAAAACGTAGAAGCAGTCAATACAATCATATGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccatt                                                                                                  <  1:66264‑M1/143‑47 (MQ=255)                                                        tggatcgCAGTGAACAAAACTTGAACCGATTTAGCAAAACGGGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaa                                                                                       <  2:537397‑M1/140‑58 (MQ=255)                                                          cATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatc                                                                                     >  1:932822‑M1/1‑84 (MQ=255)                                                              gCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattataacagtggggcgcttagtccata                                                                                 >  2:810569‑M1/1‑80 (MQ=255)                                                               cATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatat                                                                                <  2:1082287‑M1/143‑65 (MQ=255)                                                               cATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCGGGGCAActcaggtgaaaagtaccagccatcaggtcaatgaaattattccattggtccgctcaatccatat                                                                                >  2:146164‑M1/1‑79 (MQ=255)                                                                  tGAACAAAACTTGAACCGAGTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggt                                                                             <  1:1068357‑M1/143‑68 (MQ=255)                                                                     aCAAAACTTGAACCGATTTAGCAAAACGTGTCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaa                                                                          >  1:473882‑M1/1‑73 (MQ=255)                                                                       aaaaCTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatc                                                                        <  2:972294‑M1/143‑73 (MQ=255)                                                                       aaaaCTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatc                                                                        >  1:556661‑M1/1‑71 (MQ=255)                                                                       aaaaCTGGAACAGAATTAGCAAAGCGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGACTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatc                                                                        <  1:626244‑M1/143‑73 (MQ=255)                                                                        aaaCTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatca                                                                       <  2:309634‑M1/143‑74 (MQ=255)                                                                           cTTGAATCGATTTAGCAAACCGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaa                                                                    <  2:808037‑M1/143‑77 (MQ=255)                                                                              gAACCGCTTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGTCTTATACTTGCCTGGGCGActcatgtgacaagtaccagcgaactgttcaatgaaagtatttcattgggtcgcttaagccatctggctaatccgaagaa                                                                 >  1:235076‑M1/1‑64 (MQ=255)                                                                              gAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaggaa                                                                 >  1:1137575‑M1/1‑64 (MQ=255)                                                                                aCCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcataacaaag                                                               >  2:372905‑M1/1‑62 (MQ=255)                                                                                aCCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcgtaaaccatatggttaatcagaagaaag                                                               >  1:703715‑M1/1‑62 (MQ=255)                                                                                  cGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTAGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattcccttgggtcgctgactccatatggttcatcagaagaaagat                                                             >  1:527706‑M1/1‑60 (MQ=255)                                                                                   gATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatc                                                            <  1:1086758‑M1/143‑85 (MQ=255)                                                                                     tttAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgc                                                          <  2:660736‑M1/143‑87 (MQ=255)                                                                                      ttAGCAAAACGTGGCATCGGTCAATTCATGCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcc                                                         <  2:852054‑M1/143‑88 (MQ=255)                                                                                          cAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgct                                                     >  1:72728‑M1/1‑52 (MQ=255)                                                                                          cAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgct                                                     >  2:453036‑M1/1‑52 (MQ=255)                                                                                                ggggcaGCGGTCAATTTATTCATTTGACTTATACTTGCGTGGGCAAgtaatgtgaaaagtactagcgatctgttcaatgaaagtattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacga                                               <  2:250670‑M1/141‑98 (MQ=255)                                                                                                 tGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgag                                              >  1:1102256‑M1/1‑45 (MQ=255)                                                                                                   gCATCGGGCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagta                                            <  1:887851‑M1/143‑101 (MQ=255)                                                                                                         gTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgcgtatctgtc                                      >  1:156152‑M1/1‑37 (MQ=255)                                                                                                            agtgcattcgtttgacGTATACTTGCCTTGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagtatctgtctcc                                   <  2:1198353‑M1/139‑110 (MQ=255)                                                                                                               tcattcatTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatggaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagtatctgtttccgct                                >  1:264792‑M1/1‑31 (MQ=255)                                                                                                               tcattcatTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatgattaattagtagaaagatcgcctgcttaacgagtatctgtctctgct                                >  1:704774‑M1/1‑31 (MQ=255)                                                                                                                 attcattTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagtatctgtctccgctgg                              >  2:112420‑M1/1‑29 (MQ=255)                                                                                                                 attcattTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctggtcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagtatctgtctccgctgg                              <  2:514531‑M1/143‑115 (MQ=255)                                                                                                                  ttcattTGCCTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagtatctgtctccgctgga                             <  1:547376‑M1/143‑116 (MQ=255)                                                                                                                  ttcattTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagtatctgtctccgctgta                             >  1:386354‑M1/1‑28 (MQ=255)                                                                                                                  ttcattTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagtatctgtctccgctgga                             <  1:712231‑M1/143‑116 (MQ=255)                                                                                                                      tttGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagtatctgtctccgctggatatt                         >  1:799718‑M1/1‑24 (MQ=255)                                                                                                                          aCTTCTCCTTGCCTGGGCAActaatatgaaaagtaacagcgatctgttcaattaaattataccattgggccgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgaggatctgtctccgctggatattaccg                     <  2:905185‑M1/143‑124 (MQ=255)                                                                                                                          aCTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagtatctgtctccgctgtatcttaccg                     >  2:63764‑M1/1‑20 (MQ=255)                                                                                                                            ttATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgggtagctgtctccgctgggcattaccggc                   >  1:1038142‑M1/1‑18 (MQ=255)                                                                                                                              ataCTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttactcagaagaaagatcgcctccttaccgagtatcggtcgccgctggatattaccgcggc                 >  1:635681‑M1/1‑16 (MQ=255)                                                                                                                              ataCTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagtatctgtctccgctggatattaccgcgga                 >  1:809714‑M1/1‑16 (MQ=255)                                                                                                                                      cTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagtatctgtctccgctggatattaccgcggcacagtcta         >  2:273603‑M1/1‑8 (MQ=255)                                                                                                                                        gggCAActtatgtgaaaagtaccagcgagctgttcaatgaaattatcccattgggtagcctactctatatggttaatcagaagaaagatcgcctgctgaacgagtatctgtctccgctggatattaccgcggcacagtttaag       <  2:938267‑M1/143‑138 (MQ=255)                                                                                                                                        gggCAActaatgtgacaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagtatctgtctccgctggatattaccgcggcacagtttaag       <  2:963116‑M1/143‑138 (MQ=255)                                                                                                                                        gggCAActaatgtgaaaagtaccagcgatctgtccaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagtatctgtctccgctggatattaccgcggcacagtttaag       <  1:1123298‑M1/143‑138 (MQ=255)                                                                                                                                         ggCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatcgatatggttaatcagaagaaagatcgcctgcttaacgactatctgtctccactggatattaccgcggcagagcttaagg      >  2:975877‑M1/1‑5 (MQ=255)                                                                                                                                            aactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagtatctgtctccgctggatattaccgcggcacagtttaaggtgc   >  1:301408‑M1/1‑2 (MQ=255)                                                                                                                                             actaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagtatctgtctccgctggatattaccgcggcacagtttaaggtgct  <  2:628912‑M1/143‑143 (MQ=255)                                                                                                                                             |                                                                                                                                               TCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCT  >  NC_000913/1618939‑1619221

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑