Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,001,645 Δ5 bp coding (220‑224/951 nt) corA → magnesium/nickel/cobalt transporter

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4001645 4001649 5 59 [0] [0] 59 corA magnesium/nickel/cobalt transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40016440 (0.000)59 (0.850) 53/284 0.2 100% coding (219/951 nt) corA magnesium/nickel/cobalt transporter
?NC_000913 4001650 = 0 (0.000)coding (225/951 nt) corA magnesium/nickel/cobalt transporter

TGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGT  >  NC_000913/4001507‑4001785
                                                                                                                                         |                                                                                                                                             
tGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACACTCTGAACTTGGCCAGCGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGCAGACGACGCCGGCCCGCAActcct                                                                                                                                          >  1:683111‑M1/1‑138 (MQ=255)
 ggATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcctt                                                                                                                                         >  1:1212291‑M1/1‑137 (MQ=255)
   aTTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttct                                                                                                                                       >  1:715673‑M1/1‑135 (MQ=255)
     tGATCGTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGACGACGACGACGGCCTGCATctccttcttc                                                                                                                                     <  1:386231‑M1/143‑11 (MQ=255)
        tCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCGGAACTTGGCCAGAGCCGGGCAACCCGCCCGGAACTGGAACACATCGAAGCATCGGCGCGTTTCTTTGGAGACGACGACGGCCTGCATcgccttctgcctc                                                                                                                                  >  1:409272‑M1/1‑130 (MQ=255)
         cTTCTCGAACCCGACGACGCCGAGCGACTGCCCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGACGCATCGGCACGTTGCTTTGAAGACGACGACGGCCTGCATctccttcttcttct                                                                                                                                 <  2:215262‑M1/143‑15 (MQ=255)
          ttGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGCAGCAGCGGCACGGTTGGTTGAAGACGGCGACGGCCTGCAGctccctctccggcct                                                                                                                                >  2:1018528‑M1/1‑128 (MQ=255)
              cGAAACGGCCGAGGACGAGCGACTGCGCGTACAATCTGAACTGGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaa                                                                                                                            <  2:661605‑M1/143‑20 (MQ=255)
                aaCCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaaga                                                                                                                          <  1:1052535‑M1/143‑22 (MQ=255)
                  ccGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCTGGAACTGGAAGACATCGAAGCATCGGCACGTCTCTTTGAAGACGACGACGGCCTGCATctgcgtgttcttctttgacgatg                                                                                                                        >  2:1133154‑M1/1‑120 (MQ=255)
                  ccGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatg                                                                                                                        <  1:1186589‑M1/143‑24 (MQ=255)
                  ccGCACCACGACGACCGACCGCGCGCACAATCTCAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTCCATctccttcttcttctttgaagatg                                                                                                                        <  1:1127176‑M1/143‑24 (MQ=255)
                   cgcacgacgacgagcGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgc                                                                                                                       <  2:773212‑M1/140‑25 (MQ=255)
                   cGGACGACGGCGAGCGACAGCGCGTACAATCTGAACTTGGCCAGAGCCCGGCAACCCGCCCGGAACTGGAAGACAGCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgc                                                                                                                       <  1:495776‑M1/143‑25 (MQ=255)
                   cGGACGACGACGAGCGACTGCGCGGACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgc                                                                                                                       <  1:666242‑M1/143‑25 (MQ=255)
                    ggACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcctccttcttctttggcgatgcg                                                                                                                      >  1:202617‑M1/1‑118 (MQ=255)
                     gacgacgacGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgggg                                                                                                                     >  2:964486‑M1/1‑117 (MQ=255)
                     gacgacgacGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCGGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgg                                                                                                                     <  2:877516‑M1/143‑27 (MQ=255)
                                gCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgcc                                                                                                          >  1:29037‑M1/1‑106 (MQ=255)
                                   cctGCGCGTACAATCTGAACTTGGCCATAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggt                                                                                                       <  1:731358‑M1/142‑41 (MQ=255)
                                     tGCGCGGGCAATCTGAACTGGGCCAGAGGCTGGCGACCCGCGCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctgtgaagatgcggaagatcacgccggtaa                                                                                                     <  2:68455‑M1/143‑43 (MQ=255)
                                      gcgcCTACAATCGGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCAGCGGCACGTTTCTTGGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaac                                                                                                    <  2:214243‑M1/143‑44 (MQ=255)
                                         cgTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactcc                                                                                                 <  1:969513‑M1/143‑47 (MQ=255)
                                           tACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagagcacgccggtaactgcac                                                                                               >  1:947607‑M1/1‑95 (MQ=255)
                                               cgcggaccttggccaGAGCCTGGCAACGCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtg                                                                                           <  2:423544‑M1/136‑53 (MQ=255)
                                                 cTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggc                                                                                         <  2:943743‑M1/143‑55 (MQ=255)
                                                  tGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgcagatgcggaagataacgccggtaactccactgtggca                                                                                        >  2:993528‑M1/1‑88 (MQ=255)
                                                     aCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgccgaagcacacggccgtgcttccaccgtggcattt                                                                                     >  2:1143805‑M1/1‑85 (MQ=255)
                                                      cTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttc                                                                                    >  1:471647‑M1/1‑84 (MQ=255)
                                                      cTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACAACAACGGACTGCATctccttcttcttatttgaagatgcggaagatcacgccggtaactccactgtggcattta                                                                                    >  1:1100110‑M1/1‑84 (MQ=255)
                                                           ccAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcttttaccatc                                                                               >  1:613739‑M1/1‑79 (MQ=255)
                                                            cAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaaccccactgtggcatttaccatcc                                                                              >  2:1145525‑M1/1‑78 (MQ=255)
                                                              gagCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgt                                                                            <  2:947938‑M1/143‑68 (MQ=255)
                                                                gCCTGGCAACCCGCCCGGAACGGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGGCGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtga                                                                          <  2:29250‑M1/143‑70 (MQ=255)
                                                                         cccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtct                                                                 <  1:805134‑M1/143‑79 (MQ=255)
                                                                         cccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtct                                                                 >  1:500053‑M1/1‑65 (MQ=255)
                                                                           cgcccgGAACTGGAAGACATCGAAGCACCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgt                                                               <  1:784713‑M1/143‑81 (MQ=255)
                                                                            gcccgGAACTGCAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcgtcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtt                                                              <  1:358622‑M1/143‑82 (MQ=255)
                                                                             cccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccattcgtgatggtcgtctgttt                                                             >  1:272605‑M1/1‑61 (MQ=255)
                                                                              ctagaacTGGAAGACATCTAAGCATCCGCACGTTTCTGTGAAGACGACGACGGCCTGCATctccttctacttctttgaagatgctgaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgttta                                                            <  1:1004528‑M1/140‑84 (MQ=255)
                                                                              ccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgttta                                                            >  2:787202‑M1/1‑60 (MQ=255)
                                                                                 gAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttggaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactc                                                         <  1:792873‑M1/143‑87 (MQ=255)
                                                                                     tGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctgtgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgggatggtcgtctgtttactctgcg                                                     >  2:607598‑M1/1‑53 (MQ=255)
                                                                                      ggAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgt                                                    >  1:554249‑M1/1‑52 (MQ=255)
                                                                                      ggAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgt                                                    <  2:715673‑M1/143‑92 (MQ=255)
                                                                                               ggaggcatcGTCGCGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa                                           <  1:901367‑M1/139‑101 (MQ=255)
                                                                                               cGAAGCATCGGCACGTTTCTTTGGAGACGGGGACCGCCTGCATccgcggcttcggctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccttgatggtcgtctgtttactctgcgtgagcgtgaa                                           <  1:170599‑M1/143‑101 (MQ=255)
                                                                                                          cccgtTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttt                                <  1:1091216‑M1/141‑112 (MQ=255)
                                                                                                             gTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcg                             >  1:344019‑M1/1‑29 (MQ=255)
                                                                                                               ttCTTTGAAGACGACCACGTCTTGCATctccttcttcttctttgaagatgcggcagatcacgccggtaactccactgccgcatttaccatccgtgatgttcgtctctttactctgcgtgagcgtgaactgcccgctcttcgtc                           <  1:189481‑M1/143‑117 (MQ=255)
                                                                                                                   ttGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgctgttcgtgtgta                       >  1:500580‑M1/1‑23 (MQ=255)
                                                                                                                         acgacgccgGCCTGCATctccttcttcttcgttgcagatgcggaagattacgccggtcactccactgtggcatttaccatccgtgatggtcttctgttttctctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtat                 <  2:1240535‑M1/143‑127 (MQ=255)
                                                                                                                         acgacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgcactgcccgcttttcgtctgtatcgtat                 >  2:805428‑M1/1‑17 (MQ=255)
                                                                                                                         acgacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtat                 >  1:194045‑M1/1‑17 (MQ=255)
                                                                                                                           gactacgGTCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgc               <  1:1156118‑M1/143‑129 (MQ=255)
                                                                                                                           gacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgc               >  2:644507‑M1/1‑15 (MQ=255)
                                                                                                                                cgGCCTGCATctcctgcttctgctttgaagatgcggaagatcccgagggtaactccactgcggcagttaccttccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcc          <  1:341200‑M1/143‑134 (MQ=255)
                                                                                                                                 ggCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgccc         >  1:594386‑M1/1‑9 (MQ=255)
                                                                                                                                        aTctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttctcgtctgtatcgtatgcgtgcccgtagcca  >  2:516361‑M1/1‑2 (MQ=255)
                                                                                                                                         |                                                                                                                                             
TGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGT  >  NC_000913/4001507‑4001785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: