Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,299,499 Δ1,199 bp intergenic (+254/‑485) ychE → / → oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1299499–1300693 1300697 5–1199 84 [0] [0] 85 ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12994980 (0.000)80 (1.190) 65/276 0.0 100% intergenic (+253/‑1684) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
?NC_000913 1300698 = 0 (0.000)intergenic (+1453/‑484) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

TAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGT  >  NC_000913/1300558‑1300840
                                                                                                                                            |                                                                                                                                              
ttacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctttgtttgctgaagaataattgaaatgatattattaattccactgcctgtggtagaggaaagtgctaaata                                                                                                                                              <  1:454641‑M2/3‑1 (MQ=255)
 ttacagttagttataaggatttccttaactgcttatcctcaccatcatgttattttcgccacattataatcctcggcttgctcaagaataattgaaatgatattcttaattacactgcccttggaagaggaaagtctaaaata                                                                                                                                             >  2:65870‑M2/140‑140 (MQ=255)
   cagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataata                                                                                                                                           <  2:466250‑M2/6‑1 (MQ=255)
    agttagttataaggatttccttaactgcttctcctcaccttcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataataa                                                                                                                                          <  2:341512‑M2/7‑1 (MQ=255)
    agttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcatactcatgagcttccgccaggatcattgacatgatattattcagtccactgcctttggtagaggaaagtgctaaataatag                                                                                                                                          >  2:441885‑M2/137‑142 (MQ=255)
    agttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataataa                                                                                                                                          <  1:782563‑M2/7‑1 (MQ=255)
      ttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATc                                                                                                                                        >  2:221134‑M2/135‑143 (MQ=255)
       tagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCa                                                                                                                                       <  2:777043‑M2/10‑1 (MQ=255)
          ttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgacatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAtt                                                                                                                                    <  1:716756‑M2/13‑1 (MQ=255)
          ttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAtt                                                                                                                                    <  1:826977‑M2/13‑1 (MQ=255)
          ttataaggatttccttaactgcttcgcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAtt                                                                                                                                    <  2:285798‑M2/13‑1 (MQ=255)
             taaggatttgcttaactgcttctgctcaccatcatgttgttttcgccacatcataatcctgggcttactgaagaataattgaaatgatattattaattccactgcatttggtagaggaaagggataaATAATAATCAATTGtt                                                                                                                                 >  2:395697‑M2/128‑143 (MQ=255)
                      ccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctggacttgctgaagaataattgaaatgatattattaattccactgactttggtagaggaaagtgctaaATATTAATCATTTGTTAAATTATtg                                                                                                                        >  2:228832‑M2/119‑143 (MQ=255)
                       cttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtgt                                                                                                                       <  1:221134‑M2/26‑1 (MQ=255)
                             tgcttctcctcaccgtcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAttt                                                                                                                 <  2:818890‑M2/32‑1 (MQ=255)
                               cttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCa                                                                                                               <  1:850909‑M2/34‑1 (MQ=255)
                                ttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAACTGTTAAATTATTGTGCATTTCac                                                                                                              >  2:576201‑M2/109‑143 (MQ=255)
                                     ctcacgatcctgttattttcgccacctcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTg                                                                                                         <  1:567422‑M2/40‑1 (MQ=255)
                                     ctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATACTCAATTGTTAAATTATTGTGCATTTCACTACTg                                                                                                         >  2:568196‑M2/104‑143 (MQ=255)
                                     ctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTg                                                                                                         >  2:480973‑M2/104‑143 (MQ=255)
                                                gttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATc                                                                                              >  1:421353‑M2/93‑143 (MQ=255)
                                                gttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATc                                                                                              <  2:732068‑M2/51‑1 (MQ=255)
                                                 ttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCa                                                                                             >  1:1142296‑M2/92‑143 (MQ=255)
                                                 ttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTAACTACTGGAACTGTAATCa                                                                                             >  2:541345‑M2/92‑143 (MQ=255)
                                                    ttttcgccacatcataatcctgagcttgctgaagaataattgaaatgatattattaattcaactgcctttggtataggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGAACTGTAATCAGaaa                                                                                         <  2:1017365‑M2/55‑1 (MQ=255)
                                                     tttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaa                                                                                         >  1:1006126‑M2/88‑143 (MQ=255)
                                                      ttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaaa                                                                                        <  2:388349‑M2/57‑1 (MQ=255)
                                                      ttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaaa                                                                                        >  2:328165‑M2/87‑143 (MQ=255)
                                                      ttcgccaaatcataatcctggtcgtgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGTAACTGTAATCAGaaaa                                                                                        <  2:220570‑M2/57‑1 (MQ=255)
                                                       tcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAg                                                                                       >  1:956895‑M2/86‑143 (MQ=255)
                                                         gccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGAt                                                                                     <  1:545489‑M2/60‑1 (MQ=255)
                                                          gcacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATa                                                                                    <  2:389611‑M2/61‑1 (MQ=255)
                                                          ccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATa                                                                                    <  2:1063178‑M2/61‑1 (MQ=255)
                                                             catcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGAc                                                                                 <  1:217939‑M2/64‑1 (MQ=255)
                                                               tcataatcctgggcctgctaaagaattatttaaatgatattattaattccactgcctttggtagacaaacttcctaaATCACAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACAt                                                                               <  2:82121‑M2/66‑1 (MQ=255)
                                                                    cgcctgggcgtgctgaagaagaagtgagatgatatgatgaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGGTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTa                                                                          <  1:194850‑M2/71‑1 (MQ=255)
                                                                       ctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGcc                                                                       <  2:662356‑M2/74‑1 (MQ=255)
                                                                       ctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGcc                                                                       <  1:115241‑M2/74‑1 (MQ=255)
                                                                         gggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCaa                                                                     >  1:1020237‑M2/68‑143 (MQ=255)
                                                                          ggcctgcggaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAt                                                                    <  2:640481‑M2/77‑1 (MQ=255)
                                                                                 tgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAtt                                                             >  2:647445‑M2/60‑143 (MQ=255)
                                                                                  gaagaataattgaaatgatattattaattacactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATACACATGCTTAGCCAATCTCTAttt                                                            >  2:730148‑M2/59‑143 (MQ=255)
                                                                                  gaagaataattgaaatgatattattaagtccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAttt                                                            <  2:330208‑M2/85‑1 (MQ=255)
                                                                                     gaataattgaaatgattttattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgat                                                         <  2:488909‑M2/88‑1 (MQ=255)
                                                                                      aataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgatt                                                        >  1:342972‑M2/55‑143 (MQ=255)
                                                                                           ctggaattatatgactaatccccctgcccgtggtagaggcaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGTTAGACATGCTTAGCCAATCTCTATTTGattgaatt                                                   <  1:646916‑M2/94‑1 (MQ=255)
                                                                                              aaatgatcttattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGAttgaattgaa                                                <  2:137753‑M2/97‑1 (MQ=255)
                                                                                               aattatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGaaa                                               <  2:169257‑M2/98‑1 (MQ=255)
                                                                                               aatgattttattaattccactgcctttgttagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGaaa                                               <  1:323106‑M2/98‑1 (MQ=255)
                                                                                               aatgatattattaattccactgcctttggtagaggaaagtgctaaGTAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATCTGATTGAATTGaaa                                               >  1:143620‑M2/46‑143 (MQ=255)
                                                                                                 tgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATGTCTATTAGATTAAAGTGAACGa                                             >  2:1058580‑M2/44‑143 (MQ=255)
                                                                                                 tgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGa                                             <  1:488987‑M2/100‑1 (MQ=255)
                                                                                                  gatattattaattccactgcctttggtagagggagtgtcaaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGAAACTGTAAGCAGAAAAGATATACATGCTTATCCAATCTCTATTTGATTGAATTGAAAGAt                                            >  2:1091125‑M2/43‑143 (MQ=255)
                                                                                                   atattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGCATTGAACGAtg                                           >  1:615213‑M2/42‑143 (MQ=255)
                                                                                                    tattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgt                                          <  1:172458‑M2/103‑1 (MQ=255)
                                                                                                      ttattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATGGAAAGAtgttt                                        >  1:650565‑M2/39‑143 (MQ=255)
                                                                                                        attaattccactgcctttggtagaggacagtgctaaATAATAATCAATTGTTGAATTACCAACAAATTAACTACTTGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgtttgt                                      >  2:888369‑M2/37‑143 (MQ=255)
                                                                                                        attaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAAATATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGATTAGCCAATCTCTATTTAATTGAATTGAAAGAtgcttgt                                      >  2:1193126‑M2/37‑143 (MQ=255)
                                                                                                         ttaattccactgcctttggtagaggaaagtgctaaATAATAATTAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAGGAtgtttgtt                                     >  2:686228‑M2/36‑143 (MQ=255)
                                                                                                         ttaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAGTTCACTACTGGAACTGTAATAAGAAAAGATAGAAATGCTTAGCCAATCCCTATTTGATTGAATTGAAAGAggtttgtt                                     >  2:70906‑M2/36‑143 (MQ=255)
                                                                                                           aattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTaa                                   <  1:324695‑M2/110‑1 (MQ=255)
                                                                                                            attccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAg                                  <  1:480973‑M2/111‑1 (MQ=255)
                                                                                                            attccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAAATAAAAGATGATTGTTAAg                                  >  2:164254‑M2/33‑143 (MQ=255)
                                                                                                              tccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTaagac                                >  2:567280‑M2/31‑141 (MQ=255)
                                                                                                                cactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCAt                              <  1:69736‑M2/115‑1 (MQ=255)
                                                                                                                 actgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATg                             >  2:234984‑M2/28‑143 (MQ=255)
                                                                                                                 actgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATg                             <  1:835628‑M2/116‑1 (MQ=255)
                                                                                                                  ctgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATgg                            <  2:1020237‑M2/117‑1 (MQ=255)
                                                                                                                    gcgtttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCGGAAAAGATAGACATGCTTGGCCGATCTCTATTTGATGGAATTGAAAGATGTTTGTTAAGGCATGGAt                          <  1:1189814‑M2/119‑1 (MQ=255)
                                                                                                                    gcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGAt                          <  2:905768‑M2/119‑1 (MQ=255)
                                                                                                                     cctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAACAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATg                         >  1:577682‑M2/24‑143 (MQ=255)
                                                                                                                     cctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAACGATGTTTGTTAAGGCATGGCTg                         >  2:1121654‑M2/24‑143 (MQ=255)
                                                                                                                          ggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGc                    <  1:740660‑M2/125‑1 (MQ=255)
                                                                                                                            tagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCta                  >  1:589625‑M2/17‑143 (MQ=255)
                                                                                                                            tagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGACAATCTGTATTTGATTGAATTGAGAGATGTTTGTTAAGGCATGGATGAGAGCta                  >  2:1047843‑M2/17‑143 (MQ=255)
                                                                                                                             agaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCtat                 <  1:805472‑M2/128‑1 (MQ=255)
                                                                                                                              gaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCtata                >  2:848225‑M2/15‑143 (MQ=255)
                                                                                                                               aggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAg               >  2:1112254‑M2/14‑143 (MQ=255)
                                                                                                                                 gaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGAt             >  1:793927‑M2/12‑143 (MQ=255)
                                                                                                                                  aaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGAtt            >  1:190868‑M2/11‑143 (MQ=255)
                                                                                                                                      ggccaaAGAATAATCAATTGTTAAATTATTCTGCACTTCACTACTGGAACTTTAATCCGAGAAGTTGGACCTGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGa        <  2:442141‑M2/137‑1 (MQ=255)
                                                                                                                                         taaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATAc     >  1:115368‑M2/4‑143 (MQ=255)
                                                                                                                                          aaATAATAATGGATTGTTAAAGTATGGTGGATTTGACTAGTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACg    <  2:970216‑M2/141‑1 (MQ=255)
                                                                                                                                            ataataatCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGt  <  1:1185632/143‑1 (MQ=255)
                                                                                                                                            ataataagCAATTGTTAAATTATTGTGCATGTCACTACTGGAACTGTAAGCAGAAAAGATAGACTTGCTTAGCAAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGt  <  1:465544/143‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                              
TAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGT  >  NC_000913/1300558‑1300840

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: