Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,473,884	0	T	G	21.2%	127.2 / 10.8	66	L94R (CTG→CGG)	yfdP	CPS‑53 (KpLE1) prophage; uncharacterized protein
Reads supporting (aligned to +/- strand):  ref base T (28/24);  new base G (14/0);  total (42/24)
Fisher's exact test for biased strand distribution p-value = 1.08e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

TCAACCTGGAAATCGAACCATTTGATGAGAACCGTCTGAAAATCAAACACAAACTCTCATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCTTAATTAACTAATTATTTATCTCATCACTGAATATCTTAATATAGTGAGGA  >  NC_000913/2473743‑2474025                                                                                                                                              |                                                                                                                                               tcaACCTGGAAATCGAACCATTTGATGAGAACCGTCTGAAAATCAAACACAAACTCTCATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTg                                                                                                                                               >  2:763629/1‑143 (MQ=255) tcaACCTGGAAATCGAACCATTTGATGAGAACCGTCTGAAAATCAAACACAAACTCTCATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTg                                                                                                                                               >  1:131369/1‑143 (MQ=255)  caACCTGGACATCGAACCATTTGCTGCGAACCGTCTGAAAATCAAACACAAACTCCCATATGTTCGCCCGCCTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGa                                                                                                                                              <  1:384250/143‑1 (MQ=255)      cTGGAAATCGAACCATTTGATGAGAACCGTCTGAAAATCAAACACAAACTCTCATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCGGACTAt                                                                                                                                          >  2:690993/1‑143 (MQ=255)        ggAAATCGAACCATTTGATGAGAACCGTCTGAAAATCAAACACAAACTCTCATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTc                                                                                                                                        >  1:647905/1‑143 (MQ=255)         gAAATCGCACCCTTTGATGAGAACCGGCGGAAAACCAAACACAAGCGCGTAGATGTTCGCCCGACTACCCGTGGGAAAATTTCCGAAGAAGACACCACCTAAACGCCTATGTATGTCAATCGCGGTGGTCGCCTGACTATTCt                                                                                                                                       <  1:170429/143‑1 (MQ=255)         gAAATCGAACCATTTGATGAGAACCGTCTGAAAATCAAACACAAACTCTCATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTAttat                                                                                                                                       >  1:693774/1‑141 (MQ=255)           aaTCGAACCATTTGATGAGAACCGTCTGAAAATCAAACACAAACTCTCATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCGGACCCTTCTga                                                                                                                                     >  2:64951/1‑142 (MQ=255)           aaTCGAACCATTTGATGAGAACCGTCTGAAAATCAAACACAAACTCTCATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCGGACCATTCTGc                                                                                                                                     >  2:392873/1‑143 (MQ=255)            aTCGAACCAGTTGATGAGAACCGGCTGAAAATCAAACACAAACTCTCATATGTTCGCCCGACTAAACGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCa                                                                                                                                    <  1:468390/143‑1 (MQ=255)             tCGAACCGTTGGATGAGAACCGTCTGAAAATCAAACACAAACTCTCATATGGTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAg                                                                                                                                   <  1:515814/143‑1 (MQ=255)                               aCCGTCTGAAAAGCAAACACAAACTCTCATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTa                                                                                                                 <  1:1206199/143‑1 (MQ=255)                                      gAAAATCAAACACAAACTCTCATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACCATTCTGAAGGAAGACCAGGGACACTCACTGActc                                                                                                          >  2:1223822/1‑143 (MQ=255)                                         aaTCAAACACAAACTCTCATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑g                                                                                                      >  1:356875/1‑143 (MQ=255)                                              aaCACACACTCTCATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCTGGt                                                                                                 <  1:305805/143‑1 (MQ=255)                                                cacaAACTCTCATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGa                                                                                               >  1:872253/1‑143 (MQ=255)                                                 acaAACTCTCATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAg                                                                                              >  1:890893/1‑143 (MQ=255)                                                  caAACTCTCATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGCCACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGCCAATTACTGACTCTT‑GCCGGTGAGc                                                                                             <  1:1221842/143‑1 (MQ=255)                                                   aaaCTCTCATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGcc                                                                                            >  1:843102/1‑143 (MQ=255)                                                   aaaCTCTCATATGTCCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGcc                                                                                            <  1:616836/143‑1 (MQ=255)                                                     acgcgcATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTg                                                                                          <  1:1222278/138‑1 (MQ=255)                                                       tctcATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCGGACCATTCTGCAGGAAGACCAGGGACAGTTACTGACTCTT‑GCCGGTGAGCCTGAc                                                                                        >  2:32544/1‑143 (MQ=255)                                                        tcgacatGTCCGCCCGACTGACCGTGCAACATTTACCGAAGAAGCCACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGAACAATTACTGACTCTT‑GCCGGTGAGCCTGACg                                                                                       <  2:37446/138‑1 (MQ=255)                                                          cATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCGGACCATTCTACAAAAAAAACAGGGACACTTACTGACTCTC‑GCCGGAGAGCCTGACGGa                                                                                     >  2:434867/1‑143 (MQ=255)                                                           atatGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGaa                                                                                    >  1:154150/1‑143 (MQ=255)                                                            tatGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGaaa                                                                                   <  1:1009753/143‑1 (MQ=255)                                                              tGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAAc                                                                                 >  1:855092/1‑143 (MQ=255)                                                               gTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACt                                                                                >  1:39455/1‑143 (MQ=255)                                                                  cGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCcg                                                                             <  1:323819/143‑1 (MQ=255)                                                                   gCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCcgc                                                                            <  1:784267/143‑1 (MQ=255)                                                                     ccGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACCATTCTACAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACCCCgcgc                                                                          >  2:649222/1‑143 (MQ=255)                                                                        aCTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCGGACCATTCTGCAAAAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCgcacc                                                                       >  2:405832/1‑141 (MQ=255)                                                                                  ggAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTat                                                             >  1:741843/1‑142 (MQ=255)                                                                                  ggAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTaa                                                             >  1:1138310/1‑143 (MQ=255)                                                                                   gAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCTCGGTGGTCGCCGGATCATTATAAAGAAAAACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGAAAAACTCCGCGCAGCAGGTCATTAat                                                            >  2:32425/1‑143 (MQ=255)                                                                                        tttCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCAt                                                       >  1:901657/1‑143 (MQ=255)                                                                                          tCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGG‑CAAGTTTTAAATCTTCTCCAGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTc                                                     >  1:1240158/1‑143 (MQ=255)                                                                                           ccGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCt                                                    >  1:920451/1‑143 (MQ=255)                                                                                            cGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCtt                                                   >  1:1172352/1‑143 (MQ=255)                                                                                              aagaagACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCttaa                                                 >  1:742043/1‑143 (MQ=255)                                                                                              aagaagACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCGTACCATTCTAAAGAAAAACCCGGGACCATTACTGACTCTT‑GCCGGTGAACCTCACGGAAAACTCCGCGCAGCAGGTCATTAATCCCATTTttac                                                 >  2:865353/1‑142 (MQ=255)                                                                                               agaagaCACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCttaat                                                <  2:855092/143‑1 (MQ=255)                                                                                                   gaCACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCTTAATTAAc                                            <  1:223088/143‑1 (MQ=255)                                                                                                      accaccGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGAAAGAAAACAAAGCGCAGCAGGTCATTAATATCATTCTTAATTAACTaa                                         >  1:35747/1‑143 (MQ=255)                                                                                                         accGAAACGCCGATGTATGTCAATCTCGGTGGTCGCCGGACCATTCAACAAAAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCTTAATTAACTAatta                                      >  2:286617/1‑143 (MQ=255)                                                                                                         accGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCCGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGGGCAGCAGGTCGTTAATATCATTCTTAATTAACtcgtta                                      >  1:75624/1‑138 (MQ=255)                                                                                                         accGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCTTAATTAACTAatta                                      >  1:332059/1‑143 (MQ=255)                                                                                                          ccGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGTCTCTT‑GCCGGTGAGCCTGACGGAAAACTCAGCGCAGCAGGTCATTAATATCATTCTTAATTAACTAattat                                     >  1:114775/1‑143 (MQ=255)                                                                                                          ccGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCTTAATTAACTAattat                                     <  2:356875/143‑1 (MQ=255)                                                                                                           cGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCGGATCATTAAAAAGAAAAAACACGGTTAATTACTGACTCTT‑GCCGGTGAGACTGACGAAAAACTCAGCGAAGCAGGTCATAAATCACAATCATAattaattaattaga                                    >  2:1156862/1‑141 (MQ=255)                                                                                                              aaCCCCGATGTATGTCAACCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCTTAATTAACTAAttatttat                                 <  1:136642/143‑1 (MQ=255)                                                                                                                 gCCGATGTATGTCAATCGCGGTGGTCGCCGGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCTTAATTAACTAATCATTTAtctc                              >  2:1175717/1‑143 (MQ=255)                                                                                                                   cGATTTATGCCAATCGCGGTGCTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCTTAATTAACTAATTATTTATCtcat                            <  1:339197/143‑1 (MQ=255)                                                                                                                   cGATGTATGTCAATCTCGGTGGTCGCCTGATCATTCAGCAAAAAAACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGACAACTCCGCGCCGCAGGTCACTAATATCATGATCACTTAACTAATGATTCGTCtcat                            >  2:217018/1‑143 (MQ=255)                                                                                                                   cGATGTATGTCAATCGCGGTGGTCGCCTGACGATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCTTAATTAACTAATTATTTATCtcat                            <  1:907887/143‑1 (MQ=255)                                                                                                                       gtatgtCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCCGCTGGTCCTTACTATCATTCTTAATTAACTAATTATTTAAATCATCACt                        >  1:352214/1‑143 (MQ=255)                                                                                                                       gtatgtCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCTTAATTAACTAATTATTTATCTAATCACt                        >  1:897683/1‑143 (MQ=255)                                                                                                                       gtatgtCAATCGCGGTGGTCGCCGGACTATTAAAAAAAAAGACCAGGGACAATTACTGACACTT‑GCCGGGGAGCCTGCCGGAAAACTCAGCGCAGCAGGTCATAAAAAGCAATCTTAATTAACTAAATAATTAACATATCAcg                        >  2:775967/1‑142 (MQ=255)                                                                                                                       gtacgtCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCTTAATTAACTAATTATTTATCTCATCACt                        <  1:376374/143‑1 (MQ=255)                                                                                                                          tgcaaaTCGCCGGGGGTGCCTCACCATTCTCCAGGAAGACCAGAGACAATTGCTGACTCTA‑GCCGATGTGCCTGACTGAAAACTCCGCGCAGCAGGTCATTAATATCATTCTTAATTAACTAATTATTTATCTCATCACTGaa                     <  2:1013491/139‑1 (MQ=255)                                                                                                                             cAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCTTCATTAACTAATTATTTATCTCATCACTGCatat                  >  1:706173/1‑143 (MQ=255)                                                                                                                              aaTCTCGGTGGTCGCCGTATCATTAAACAAAAACACCATGGACAATTACTGACTCTT‑GCCGGTGACCCTGCCGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCTTCATTACCTAATTCTTCATCTCCTCACTGAatacc                 >  2:907068/1‑141 (MQ=255)                                                                                                                              aaTCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCTTAATTAACTAATTATTTATCTCATCACTGAATATc                 <  2:154150/143‑1 (MQ=255)                                                                                                                              aaTCGCGGTGGTCGCCGGACTATTCTGCAGGAAGACCAGGGACAATTACTGCCTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCTTAATTAACTAAGTATTTATCTCATCACTGAATATc                 >  2:476089/1‑143 (MQ=255)                                                                                                                                   cgGTGGTCGCCTGACTATTCTGCAGGAAGACCAGCGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCTTAATTAACTAATTATTTATCTCATCACTGAATATCTTAat            <  1:112844/143‑1 (MQ=255)                                                                                                                                             cTGACTGCTCGGCAGGAAGACCAGGGAAAATACATTTCGCTT‑TCCGTTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCTTAATTAACTAATTATTTATCTCATCACTGAATATCTTAATATAGTGAGGa  <  2:1209688/143‑1 (MQ=255)                                                                                                                                              |                                                                                                                                               TCAACCTGGAAATCGAACCATTTGATGAGAACCGTCTGAAAATCAAACACAAACTCTCATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTT‑GCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAATATCATTCTTAATTAACTAATTATTTATCTCATCACTGAATATCTTAATATAGTGAGGA  >  NC_000913/2473743‑2474025

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑