| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 830,865 | A→G | 19.7% | intergenic (‑222/‑7) | ybiH ← / → rhlE | DUF1956 domain‑containing tetR family putative transcriptional regulator/ATP‑dependent RNA helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 830,865 | 0 | A | G | 19.7% | 129.8 / 5.7 | 74 | intergenic (‑222/‑7) | ybiH/rhlE | DUF1956 domain‑containing tetR family putative transcriptional regulator/ATP‑dependent RNA helicase |
| Reads supporting (aligned to +/- strand): ref base A (32/26); new base G (14/2); total (46/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.10e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATGGCAGGATTATTCATCGCACAGTCCATTCTTAATCAAATGATTGATTAAGATTATGACTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCCGCGACCTGATGGCTAGCGCCCAGACCGGCACCGGCAAAACAGCGGGCTTTACGCTGCCGCTGTTGCAACACCTGATCACTCGCCAGCCGCACGCCAAAGGGCGTCGTCCGGTACG > NC_000913/830627‑831101 | aTGGCAGGATTATTCATCGGACAGTCCATTCTTAATCAAATGAGTGATTAAGATTATGCCTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGa < 1:358607/239‑1 (MQ=255)aTGGCAGGATTATTCATCGCACAGTCCATTCTTAATCAAATGATTGATTAAGATTATGACTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGa < 1:39933/239‑1 (MQ=255) attattCATCGCACAGTCCATTCTTAATCAAATGATTGATTAAGATTATGACTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTAAACCGGTAACGGTCGGGGCGG‑TTCGGGGTAGTTAt > 1:199642/1‑239 (MQ=255) aTCGCACAGTCCATTCTTAATCAAATGATTGATTAAGATTATGACTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGGGGAATTATGTCtttt > 1:515565/1‑238 (MQ=255) cGCACAGTCCATTCTTAATCAAATGATTGATTAAGATTATGCCTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGa < 1:392971/239‑1 (MQ=255) cGCACAGTCCATTCTTAATCAAATGATTGATTAAGATTATGACTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGa < 1:780745/239‑1 (MQ=255) cGCACAGTCCATTCTTAATCAAATGATTGATTAAGATTATGACTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGGAGGTCTATCTTTTGa > 1:392627/1‑239 (MQ=255) tCCATTCTTAATCAAATGATTGATTAAGATTATGACTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGGTTTTGTCATTTTCCTTTTCAGTATCTCCCTGCAAACTACACCGGTAACGGTCGGGGCGG‑TTCTGGGGAGATATGTTTTTTCATACtttt > 2:516656/1‑238 (MQ=255) tCTTAATCAAATGATTGATTAAGATTATGACTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGCGGTAGGTATGTCTTTCGCGTCTTTGGGttt > 1:592445/1‑239 (MQ=255) tCTTAATCAAATGATTGATTAAGAATATGACTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTGTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGttt < 1:423820/239‑1 (MQ=255) cTTAATCAAATGATTGATTAAGATTATGACTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑a < 1:217354/239‑1 (MQ=255) aTCAAATGATTGATTAAGATTATGACTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAACCTACACCGGTAACGGTCGGGGCGG‑TTTCGGTAAGGTTTGTTTTTTGATTCTTTGGGgtttatg > 2:870700/1‑234 (MQ=255) aTCAAATGATTGATTAAGATTATGACTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGGTTTCGAAGAAATT‑TTTCTTTCGGTTCTTTGGGTGT‑AAAcc > 2:336445/1‑239 (MQ=255) aTCAAATGATTGATTAAGATTATGACTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGGGTGATTATGTCTTTCGATTCTTTTGGTTT‑aatc > 1:210484/1‑236 (MQ=255) aTCAAATGATTGATTAAGATTATGACTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGGGTAGTTATGTCTTTCGATTCTTTGGGttttaac > 1:875684/1‑234 (MQ=255) aTCAAATGATTGATTAAGATTATGACTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGGTT‑AAGc > 1:88861/1‑238 (MQ=255) aTTATGACTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTTTGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TCCGCGCCg > 1:619573/1‑239 (MQ=255) aTGACTCCATGGGGGAGTTGTCCAGTAGGGCTAAGAATTTTAGCAACGCCAGTACCAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGGTCCCTCATGACAGTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGAGGCGG‑TTCTGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTg < 1:824526/239‑1 (MQ=255) tGACTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAACCTACACCGGTAACGGTCGGGGCGG‑TTCGGGGGAGTTATGTCTTTCGATTCTTTGGGGTT‑TAGCCCCGTTAT‑CC‑GTCCCGCCGTTGc > 2:546435/1‑239 (MQ=255) tGACTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGGGTTGTTATGTCTTTTGTTTTTTTGGGGTT‑TAGCCCTGTAAT‑CC‑TGGGCGCCGTGGc > 2:629858/1‑239 (MQ=255) tGACTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGGAGTTATGTCTTTCGATTCATTGGGTTT‑AAGCCCCGATAT‑CC‑TGCGCCCCGttt > 1:165119/1‑237 (MQ=255) cATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTTGGGTT‑AAGCCCTGATAT‑CC‑TGCGCGCCggttgcgggca > 2:196618/1‑229 (MQ=255) cATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑GTTGGAGGAGTTTTGTCTTTTGATTCTTTGGGTTTAAAGCCCCGAATC‑CC‑TGCGC‑CCCTTGCC‑ggacg > 2:860524/1‑235 (MQ=255) aGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACCCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGGTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGAGAT‑CC‑TTCGCGCCGTTGCC‑GAGCCAGGTTAcc > 1:459873/1‑239 (MQ=255) ttGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTTGGGGTAGTGTTTTCCTTTGATTCTTTGGGTTT‑CAACCCTGATAA‑TC‑TGCCGGCCGTTGCCGGGGCAGGGTTAcgg > 2:816115/1‑237 (MQ=255) ttGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGGTGAGTTATGTCTTTCGATTCTTTTGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGGTTCC‑GGGCAGGGGTACCGt > 1:393741/1‑239 (MQ=255) ttGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGGGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑AC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGt > 1:392486/1‑239 (MQ=255) ttGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTGTTTATGTCTTTCTATTCTTTGGGTTT‑AAGCCCCGATTA‑CC‑TCCTCGCCGTTCCC‑GAGCCGGGTTAcccg > 1:877086/1‑237 (MQ=255) ttGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTTTGTCTTTCGATTCTTTGGGTTT‑AAGCCCGGATAT‑CA‑TGGGCGCCGGTACC‑GACACGGGTTTCCGt > 1:734294/1‑239 (MQ=255) ttGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGGTACCgg > 1:297905/1‑238 (MQ=255) ctgtttGGCTAAAAATTTTAGCCACGCCAGTCACAGGGTTAATTTATGCGCTGCGTCCCAAAAACTGCTACCCTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAacc < 2:81911/234‑1 (MQ=255) ccgttgggttAAGAATTTTAGCAACGCCAGTCACAGGGTTAATTTATGCGTTGCGGCACAAAAACTGCTACACCCCGCTCCCTCATGACATTGTTGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAacc < 2:601267/230‑1 (MQ=255) cAGTTTTGCTTAAAATTTTAACAACGCCAGTTCAAGGGATTATTTATGCGTTGCTTCAAAAAACCTGCTACACCCCGGTCCCTCAAGAAATTGTGGTTTTTGGCATTTTCCTTTTCAGTATCTCCCTTAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAacc < 2:875684/239‑1 (MQ=255) tGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGGTTCTTTGTGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑CAGCAGGGGTACCGGGAacccaac > 2:891171/1‑236 (MQ=255) tGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAacccccc > 1:81911/1‑238 (MQ=255) cTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTTGGAGTAGTTATGTCTTTCGGTTCTTTGGGGTT‑AAGCCCTGAAGT‑CCTTGCGC‑CCGTTTCC‑GACGAAGGTTTCCGTTAACCCAccccaa > 2:616109/1‑237 (MQ=255) cTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGGTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GGGCAGGGTTACCGTGAACCCAACCCtt > 1:793381/1‑238 (MQ=255) aGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑GTCGGAGTTGTTATGTCTTTTGGTTCTTTTGGGTT‑TAGTCCTGATTTACG‑TGCGC‑CCGTTGCC‑GGGGCGGGGTTCCGGCAACCCCCCCCTATTc > 2:505913/1‑239 (MQ=255) aaTTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGGTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCACCCCCATTccg > 1:730393/1‑237 (MQ=255) gCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCCGGGTTACCGTGAAACCACACCTATTCAGCAGCAGGCggt > 1:81302/1‑236 (MQ=255) gtccaaGGTATTATTTTTGTGTTGCTTCAAAAAAACTGCTACCCTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTg < 2:297905/234‑1 (MQ=255) tAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑ACGCCCTGTTGT‑CC‑TGCGCGCCGTTGCC‑GGGCAGGGTTACCGGGAACCCACCCCTATTCAGCCGCAGGCGCTCCCTTCGGGGCTGGa > 2:729646/1‑239 (MQ=255) aTGCGCTGCGTCTCAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCcg < 1:73417/239‑1 (MQ=255) tGCGCTGCGTCACAAAAACTGCTTCCCTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCcgc < 1:816115/239‑1 (MQ=255) tGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACGCACCCCCATTCAGCACCAGGCGATCCCTCCGGGGCTGGAAGGCcgc > 1:391680/1‑239 (MQ=255) gcgcTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTTGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGGTAT‑CC‑TGCGCGCCGTTTCC‑GCGCAGGGTTACCGGGAACCCCCCCCTCTTCAACAGCCGGCGAACCCCGCGGGGGTGGAAagcagc > 2:44231/1‑238 (MQ=255) gcgcTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑CTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑TAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGGTACCGTGAACCACCCCCCATTCAGCAGCAGGCGATCCCTGCGGGGCTCGAAGccccc > 1:728849/1‑236 (MQ=255) cgCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGGAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TTCGCGCCGTTGCC‑GGGCAGGGGTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGTCCTGGAAAGcccggc > 1:561487/2‑232 (MQ=255) cGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTTGGTTT‑AAGCCCTGGTAT‑CC‑TGCGCGCCGTTGCC‑GAGCCGGGGTACCGTGGACCCCCCCCTATTCCGCAGCCAGCGGACCCTGCCGGGGTGGAGGGCCGCGccccaa > 2:639880/1‑236 (MQ=255) cGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAg > 1:477402/1‑169 (MQ=255) cGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAg < 2:477402/169‑1 (MQ=255) cGTCACAAAAACTGCTACACTCCGCTCACTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGGAGTTATGTCTTTCGATTCTTTCGGGTT‑AAGGCCTCACAT‑AC‑TTCGCGCCGTTGTC‑CAGCAGGGTTACCGTGAACCCCACCCCACTCCGCAACAGGCGCTCCCCGCGGTGCTGGAAAGCcgcgcacaga > 2:125671/1‑233 (MQ=255) cGTCAC‑AAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAg > 1:198892/1‑168 (MQ=255) cGTCAC‑AAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAg < 2:198892/168‑1 (MQ=255) caAAAACTGCTACCTTCCTCTCCCTCATGACATTGTGGTTTTTGGCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCCGCGACCTGATGGCt < 1:305073/239‑1 (MQ=255) tCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTTCC‑GAGCAGGGTTACCGGGAACCCCCCCCCATTCCGCCGCCGGCGGTCCCCTCGGGGCCGGAAAGCCGCGCACTCATTGCTA‑CGccccacacccg > 2:105534/1‑230 (MQ=255) tCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCCGCGACCTGATGGCTAGCGCCCAGaccggc < 1:806552/239‑1 (MQ=255) cccccccTCATGACATTGTGGTTTTTGTCATTTCCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCCGCGACCTGATGGCTAGCGCCCAGaccggcac < 2:730393/235‑1 (MQ=255) cGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCACCCCCATTCAGCAGCAGGCGATCCCCGCGGTGCTGGAAGGCCGCGACCTGCTGGCTAGGGCCCCGacccgca > 1:614432/1‑238 (MQ=255) cGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGGTT‑AAGCCCTTATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCCCCCCCATTTCGCCGCCGGCGATACCCTCGGGGCTGGAAGGCCGCGGCCTGATGGGTAACGCCCAGacatcccc > 2:94770/1‑233 (MQ=255) gACATTGTGGTTTTGGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCCGCGACCTGATGGCTAGCGCCCAGACCGGCACCGGCAAAACAg < 1:616109/239‑1 (MQ=255) aCATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGGGTAGTTATGTCTTTTGCTTCTTTGGGGTT‑AAGCCCTGATAT‑CC‑TGCCCGCCGTTTCC‑GAGCAGGGTTACCGGGAAACCACCCCTCTTCAGCAGCCGGCGATCCCCGCGGGGTCGGAAAGCCCCCACCCGATGGGCACGGCCCCAACCCGCACCGCCCAAACaac > 2:615383/1‑237 (MQ=255) tgtgGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGGGCTGGAAGGCCGCGACCCGATGGCTAGCGCCCAGACCGGCACCGGCCAAACAGCgg > 1:209714/1‑237 (MQ=255) gtgGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGGGGAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TTCGCGCCCTTTCC‑CAGCCGGGTTACCGTTGACCCACCCCTTTTCAGCAGCAGGCGATCCCCGCGGGGCTGGAAGGCCGCGACCTGATGGCTAGCGCCCAGACCGGCCCCCGCAAAAAACCggggt > 2:357799/1‑237 (MQ=255) tttttGTCATTTTCCTTTTCAGTAGCTCCCTGAAACCTACTCCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCCGCGACCTGATGGCTAGCGCCCAGACCGGCACCGGCAAAACAGCGGGCTTTa < 1:539302/238‑1 (MQ=255) gTCCTTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGGCGGGGCGG‑TTCGGAGTAGTTAGTTCGTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCCGCGACCTGATGGCTAGCGCCCAGACCGGCACCGGCAAAACAGCGGGCTTTACGCTGc < 1:443920/239‑1 (MQ=255) gTCATTTTCCTTTTCAGTTACCTCCTGAAAACTACCCCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCCGCGACCTGATGGCTAGCGCCCAGACCGGCACCGGCAAAACAGCGGGCTTTACGCTGc < 1:742827/239‑1 (MQ=255) attttcattttcAGGATCCCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATTTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCCGCGACCTGATGGCTAGCGCCCAGACCGGCACCGGCAAAACAGCGGGCTTTACGCTGCCGc < 1:10344/239‑1 (MQ=255) ttttCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGAGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCCCCGTTGCC‑GCGCAGGGTTACCGTGGACCCCCCCCTATTCAGCACCCGTCGGTCCCTGCCTGGCCGGAAGGCCCCCCCCTGATGACTAGGGCCCCAACACGCACCCGGCAAACAGCGGGCCTTAAGcgcccacg > 2:881819/1‑232 (MQ=255) cTTTTCAGTATCTCCCTGAAAACTACGCCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCCGCGACCTGATGGCTAGCGCCCAGACCGGCACCGGCAAAACAGCGGGCTTTACGCTGCCGCTGTTGc < 1:860524/239‑1 (MQ=255) tccccGGGAACGGTCGGGGGGG‑TTTGGGGTTGTTTTGTCTTTCGGTTCTTTGGGTTT‑AAGCCCTGATTT‑CC‑TGCGGGCCGTTGCC‑GAGCCGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCCGCGACCTGATGGCTAGCGCCCAGACCGGCACCGGCAAAACAGCGGGCTTTACGCTGCCGCTGTTGCAACACCTGATCACTCGCCAGCCGc < 2:210484/236‑1 (MQ=255) accccGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCCGCGACCTGATGGCTAGCGCCCAGACCGGCACCGGCAAAACAGCGGGCTTTACGCTGCCGCTGTTGCAACACCTGATCACTCGCCAGCCGc < 1:196618/236‑1 (MQ=255) cccaggTAACGGTCGGGGCTG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCGGTGGCC‑GAGCAGGGTTACCGTGAACCCACCCCTATGCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCCGCGACCTGATGGCTAGCGCCCAGACCGGCACCGGCAAAACAGCGGGCTTTACGCTGCCGCTGTTGCAACACCTGATCACTCGCCAGCCGCa < 1:435407/235‑1 (MQ=255) aaCGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCCGCGACCTGATGGCTAGCGCCCAGACCGGCACCGGCAAAACAGCGGGCTTTACGCTGCCGCTGTTGCAACACCTGATCACTCGCCAGCCGCACGCCaa < 1:891171/238‑1 (MQ=255) gcGGGGGGG‑TTTGGGGTTTTTTTGTTTTGCGATTCTTTGGGTTT‑AAGCCCGGATAT‑CC‑TGCGGCGCGTTGCC‑GAGCAGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCCGCGGCCTGATGGCTAGCGCCCAGACCGGCACCGGCAAAACAGCGGGCTTTACGCTGCCGCTGTTGCAACACCTGATCACTCGCCAGCCGCACGCCAAAGGGc < 2:793381/237‑1 (MQ=255) ggAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATTT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCCCCCCTATTCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCCGCGACCTGATGGCTAGCGCCCAGACCGGCACCGGCAAAACAGCGGGCTTTACGCTGCCGCTGTTGCAACACCTGATCACTCGCCAGCCGCACGCCAAAGGGCGTCGTCCGGTACg < 1:885699/239‑1 (MQ=255) | ATGGCAGGATTATTCATCGCACAGTCCATTCTTAATCAAATGATTGATTAAGATTATGACTCCATAGGGGAGTTGTCCAGTATGGCTAAGAATTTTAGCAACGCCAGTCACAGGGATAATTTATGCGCTGCGTCACAAAAACTGCTACACTCCGCTCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGTCGGGGCGG‑TTCGGAGTAGTTATGTCTTTCGATTCTTTGGGTTT‑AAGCCCTGATAT‑CC‑TGCGCGCCGTTGCC‑GAGCAGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCCGCGACCTGATGGCTAGCGCCCAGACCGGCACCGGCAAAACAGCGGGCTTTACGCTGCCGCTGTTGCAACACCTGATCACTCGCCAGCCGCACGCCAAAGGGCGTCGTCCGGTACG > NC_000913/830627‑831101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |