| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_000913 | 1,619,080 | Δ35 bp | 12.3% | intergenic (‑172/‑6) | marC ← / → marR | UPF0056 family inner membrane protein/transcriptional repressor of multiple antibiotic resistance |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1619079 | 40 (0.800) | 6 (0.120) | 6/402 | NT | 12.3% | intergenic (‑171/‑41) | marC/marR | UPF0056 family inner membrane protein/transcriptional repressor of multiple antibiotic resistance |
| ? | NC_000913 | 1619115 = | 47 (0.970) | intergenic (‑207/‑5) | marC/marR | UPF0056 family inner membrane protein/transcriptional repressor of multiple antibiotic resistance | |||||
AGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGG > NC_000913/1618852‑1619306 | aaaggaaggcagcaaaCCCCCCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAA < 2:487218‑M1/221‑1 (MQ=255)aGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAA > 1:589906‑M1/1‑228 (MQ=255) caACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATcccc > 1:497044/1‑226 (MQ=255) caccacCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTCCCTGGGCAActaatgtgaaactg > 1:487218‑M1/1‑213 (MQ=255) cctccaTCCCCAGGCCAATTGCTTTAAACAAATCTAACACTGGAGGTTGTTAACCTGTGTTACTGGGTTATCCGCCAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTTCATCGCATTGAACAAAACTTGAACCAATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGACTGGGCAATATTATCCCCTGCAACt < 1:231962/225‑1 (MQ=255) aGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCATTTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctttt > 2:60826‑M1/1‑200 (MQ=255) aGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCCTTTGACTTATACTTGCCTGTGAAATATAATCCCCTGCAACTAATTACTTGcc > 1:290212/1‑228 (MQ=255) gCCAATTGCTTTAAACAAATCTAGAATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTTTCACTCTTTTGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAg < 2:387166/228‑1 (MQ=255) ttAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCAAGGGCAACTaa > 2:196597/1‑227 (MQ=255) ggtggtTTTTATCCTGTGTATCTGGGTTAGCAGGGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCCCTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGAt < 2:396822/228‑1 (MQ=255) ggtggtTGTTATCCTGTTTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGAt < 2:361891/228‑1 (MQ=255) ggtggtTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTAATTCATTTGACTTATACTTGCCTGGGCCATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGAt > 1:638168/1‑228 (MQ=255) gtggtTGTTATCCTGTGTATCTGGGATATCAGCGAAAAGTATAAGGGGTAAACAATGATAAAGTGTCACTCTTTAGCTATCCTTGCATCGCATTGAACAAAACTTGAACAGATTTAGCAAAACGTTGCATCGTGCAATTCATTCATTTGAGTTATACTTGCCTGGGCAATATTATCCCCTGCAACCAAATACTTTCCAGGGGAACTAATGGGAAAAGGACCAGcaaat > 2:432988/1‑224 (MQ=255) tgtATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAatt > 1:50768/1‑227 (MQ=255) tgtATCTGGGATATCAGCGAAAAGTATAAGGGGTCAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATAGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCACTATTATCCCCTGCAACTAATTACTTGCCAAGGCAACTAACGTGAAAAGTAACATCTATCTGTTCAATGAActta > 2:603395/1‑228 (MQ=255) cTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCa > 1:153720/1‑228 (MQ=255) cTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCa < 1:196597/228‑1 (MQ=255) gggTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCAtt > 1:514741/1‑228 (MQ=255) aGCGAAAAGTTTAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctg < 2:589906‑M1/228‑90 (MQ=255) gCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCtt < 1:507757/228‑1 (MQ=255) caaaaaGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATCCTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTa < 1:206211/226‑1 (MQ=255) gAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGTTTaa > 2:438023/1‑228 (MQ=255) aaaGTGTAAGGGGTTTACATGGATAAAGTGTCACCCTTTAGCTTGCCTTGCCTCGCATTGAACAAAACTTGAACCGATTTAGGAAAACGTGGCATCGGTCAATTCATTCATTTTCCTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATc < 2:290212/228‑1 (MQ=255) gTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAAt < 1:129729/228‑1 (MQ=255) gTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAAt < 1:389297/228‑1 (MQ=255) ggATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTAGCTTAATCCCTATGGTTAATCAtaaaaa > 2:111169/1‑228 (MQ=255) aGTGTCACTCTTTAGCTAGCCTTGCATCGCATTTAACCAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCg < 2:164858/228‑1 (MQ=255) gtgtCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGACCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCACATTGTAAATCAACAAAAAGATCGc > 2:244253/1‑228 (MQ=255) tttttACCTTGGCTTGCATCGCATTTAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTa < 2:35688/226‑1 (MQ=255) gcCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCATTTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAACGATTTGTTCAATGAAATCATTCCATCGGGTCGCTTAATCCATATGTGTAATCAACAGCAAAATCCCCTCCTTAACgggaaact > 2:408436/1‑221 (MQ=255) gcCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTACCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTCTTCCATTGGGTCGCTTAATCCTTATGGTTAATCAGAAGAAAGATCGCTTGCTTAACGAGTATCt > 1:642925/1‑228 (MQ=255) aaCAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagagtaaagatcgcttgcttaacgcgtatctgtctccgctggatattaccgcggcacagtttaaggtgctctgctctatccg > 1:641841‑M1/1‑74 (MQ=255) aaCAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGACGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATAtt > 1:46363/1‑228 (MQ=255) aaaCTTTACCCGATTTACCAAAACGTTGTATCTGTCAATTTATTCATTTGCCTTATACTGTCCTTGGCAATATTATTCCCTGCAATTAATTACTGTACAGTGCTATTAATGTTAAAATTACCAGCGTTTTGTTCAATGAAATTATTCCATTGGGTCGCTTATTCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCCCCGCTGGATATTACcg < 2:320398/228‑1 (MQ=255) aaCTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACcgc > 1:516043/1‑228 (MQ=255) cTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagtatctgtctccgctggatattaccgcggcacagtttaaggtgctctgctctatccgctgcgcg < 1:60826‑M1/228‑162 (MQ=255) tttaaCCGATTTAGCAAAACGTTGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGc < 1:280543/225‑1 (MQ=255) gAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAAc > 1:532815/1‑80 (MQ=255) aaCCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACt < 2:532815/80‑1 (MQ=255) aaaCGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGGGCCACAGTTTAAGGggccc > 2:248110/1‑226 (MQ=255) aaCGTGGCTTCGGTCAATTCATTCATTTGCCTTATCATGGACTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTCCCGCGGCACAGTTTAAGGtgctct < 2:33603/228‑1 (MQ=255) gTCAATTCATTCATTTGACTTATACTTGCCTGGGCAActaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagtatctgtctccgctggagattaccgcggcacagtttaaggtgctctgctctatccgctgcccggcgtgtattaccccggtgtaactgaaaaa > 2:175578‑M1/1‑37 (MQ=255) ttttcattgtgcTTTTACTTGCCTGGTCAATATTCCCCCCGTCAACTAATTTCTTGCCAGGGAAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCgcggc < 2:497044/217‑1 (MQ=255) tcattTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCgcggcgcg > 1:644025/1‑226 (MQ=255) tttGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGGGTAt > 1:496336/1‑228 (MQ=255) gCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGTTATTACCGCGCCACAGTTTAAGTTGCTCTGCTCTATCCGCTGGgcgg > 2:249624/1‑207 (MQ=255) ccTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCgcggc < 1:249624/207‑1 (MQ=255) gggCCActaatgggaaaagtacccgcgaatttgtcaatgaaattattccattgggtcgcttaactcatatggttaatcagaagaaagatcgcctgcttaacgagtatctgtctccgctggatattaccgcggcacagtttaaggtgctctgctctatccgctgcgcggcgtgtattactccggttgaactgaaaaaggtattgtcggtcgacctgggagcactgaccc < 2:179491‑M1/228‑223 (MQ=255) gggCACataaggtgaaaaggtccaggggtttgttcaaagaaattaatccatggggctgattaagccttatggttaatcagagtaaaggtcgccggcttaacgagtatctgtctccgctggatagtaccgcggcacagtttaaggtgctctgctctatccgctgcgcggcgtgtattactccggttgaactgaaaaaggtattgtcggtcgacctgggagcactgaccc < 2:186189‑M1/228‑223 (MQ=255) gggCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGaa < 2:516043/228‑1 (MQ=255) ggCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGaaa < 1:438023/228‑1 (MQ=255) ggCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTCCGCGGCGTGTATTACTCCGGTTGAAcgtaaa > 2:39417/1‑223 (MQ=255) actaatgtgaaaaggaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagtatctgtcgccgctggatattaccgcggctcagtttaaggtgctctgctctatccgctgcgcggcgtgtattactccggttgaactgaaaaaggtattgtcggtcgacctgggagcactgacccgtatg < 1:487414‑M1/228‑228 (MQ=255) | AGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGG > NC_000913/1618852‑1619306 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |