| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,874,505 | T→C | 15.6% | G305G (GGA→GGG) | cysN ← | sulfate adenylyltransferase, subunit 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,874,505 | 0 | T | C | 15.6% | 130.4 / 3.4 | 66 | G305G (GGA→GGG) | cysN | sulfate adenylyltransferase, subunit 1 |
| Reads supporting (aligned to +/- strand): ref base T (40/11); new base C (4/7); total (45/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.73e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTAATATCAACCTGATAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CCACCACTCGCTGGATCTCCACGGTTTCCAGCACTT > NC_000913/2874287‑2874731 | ttaATATCAACCTGATAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGCAGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCCCCA‑CAGCCAGATCGCCCCGGCCGATGTCGATCCCATCCGCCAGCACCAGGGGGAGCG‑C‑TTCTCCGGCaaaa > 2:127976/1‑227 (MQ=255)ttaATATCAACCTGATAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGGGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGCCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TCCTCCCGCaacg > 1:325025/1‑226 (MQ=255) tCAACCTGATAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCTCCGGTAACGCTTCGTCTGCCGCCCGCAC‑CCGATCGCCACGGCAGATGTCGACCCCATCCGTCAGCCCCACGGCG‑TCGCC‑CTCTCCGGCAAAGGcttct > 2:647102/1‑228 (MQ=255) cAACCTGATAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAC‑CCGATCCCCCCGGCCGCGGTCGATCCCATCCCTCCGCCCCCGGGTGACCG‑C‑TTCACCGGCCAAGGcttcat > 2:558570/1‑226 (MQ=255) cAACCTGATAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACCCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCCCCCCGGCTGATGTCGATCTCATCCGTCAGCACCAGGGCGCACG‑C‑TTTCCCCGCAAAGGgttcct > 2:436081/1‑226 (MQ=255) ccTGATAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCATAACTCTGCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCCGCACCGCCGGTAACCCTTCGCCTGCCGCCAGCAG‑CCGACCGCCACGACGGACGTCGATCCCATCCGTCACCACCAGGGACACCG‑C‑TTCTCACGCAAAGGccacctcaa > 2:62187/1‑220 (MQ=255) aTAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCCCGGCTGATGTCGCTCTCATCCGTCAGCCCCAGCGGGATCG‑C‑TTCTCCGGCAAAGGCTCCTTCCCGATc > 2:619178/1‑228 (MQ=255) aTAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCTTCAGCACCAGGGGGATCG‑C‑TTCTCCGGCAAAGGCttcttcccccta > 2:644413/1‑222 (MQ=255) aTAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCCCGAt > 1:359783/1‑227 (MQ=255) aaTGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCCTAACTCTGCCCTGCAGAAAGCGGCTCTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTCACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCCCGGCTGACTCCGATCTCACCTGCCCGCCCCCTGCTCCTCC‑C‑TTATCCGCCAAAGCCCTCTTCCCTACCACCAt > 2:387136/1‑227 (MQ=255) aaTGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGGCGGAACTCTGCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGGAGGCCTCCAGCAG‑CACATCGCAACGGCCGATGCAGATGTCATCCGTCAGCCCCACAG‑GATAG‑CGTTCTCCGGCACAGGCCGCTCCGCGTACAccca > 2:448002/1‑225 (MQ=255) aTGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CCGATCGCCACGGCTGATGTCAACCTCTTCCGCCAGCACCACGGTGACCC‑C‑TCCTCCGGCAAAGGCTCTTTCCCGCTCACCaac > 2:655966/1‑225 (MQ=255) cAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGGGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTcc > 1:370084/1‑227 (MQ=255) cgcgcgTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGCCGATCTCATCCGTCAGCACCAGGGCGATCA‑C‑TTCTCCGGCAAAGGCTTCTTCCCGATCACCCTCCAAAGTCACGATCcgc > 1:89041/1‑227 (MQ=255) cgcgcgTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCACAAG‑CAGATCGCCACGGCTGATGTCGCTCTCATCCGTCAGCCCCAGGGAGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGACACGATCcgc > 1:655191/1‑227 (MQ=255) cgcgTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACCGCTGATGTCGATCTCATCCATCAGCACCAGGGAGATCG‑C‑CTCCCCGGCAAAGGCTCCTTCGCGATCACCATCCAAAGTCACGATCcccgg > 2:627940/1‑226 (MQ=255) cgcgTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAACTCGCCACGGCCGATGTCGGTCTCCTCCGTCAGCCCCAGGGTGATCG‑C‑TTCCCCGGCCAAGGCCTCTTCCCCATCACCATCAAAAGCCACCATCcgcag > 2:504295/1‑225 (MQ=255) gCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑Ccac > 1:13350/1‑227 (MQ=255) tGCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCT‑C‑TTCTCCGGCAAAGGCTTCTTCGCGTTCACCATCAAAAGTCACGATCCCCGCG‑ACGTTTGATT‑CCCCACCAAAGGGCAGAACttgaa > 2:316848/1‑223 (MQ=255) gCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCCCGGCTGATGTCGCTCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCCTCTTCGCCATCACCATCCAAAGTCACCATCCCCGCG‑ACCTTTGATT‑CACAACCAGAGGGCACACCTTTGac > 2:380095/1‑226 (MQ=255) gCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCCCGATCACCATCAAAAGTCACGATCCGCCCG‑ACGTTTGATT‑CCACACCCGCGGGCAGCACTTTGaca > 1:354343/1‑227 (MQ=255) cccTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCCCGCTCCCCATCAAAAGCCACAGTCCCCCCG‑ACGTTTGATT‑CCCAACCCAAGGgccgtgctcttaa > 2:21329/1‑214 (MQ=255) gagaAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑Ttct > 1:83474/1‑137 (MQ=255) gagaAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGCCAGCACTTTGACACGTTGc > 1:246434/1‑227 (MQ=255) gaAAGCGGCTCTCCCGCCACCCCTCCCACCTCCCCCGCCGCGCTCGCCCCCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGcc < 1:267590/226‑1 (MQ=255) agcgggCTGTTCCGCCTCCAATCCCCCACCCACCGCCGCGCTCTGCCCCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGAc < 1:619178/224‑1 (MQ=255) aGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGCTCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCCCCATCAAAAGTCACGATCCCCGCG‑CCGTTTGCTT‑CCCCACCACAGGGCCGCACTTTGACCCGTTGCCCCACt > 2:541391/1‑228 (MQ=255) aGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGCTCACCATCAAAAGTCACGATCCGCCCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACCTTGACACAGTGCCCGACt > 1:134029/1‑228 (MQ=255) aGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCCCACCAGAGGGCAGCACTTTGAAAAGTGGCCCgcc > 2:267590/1‑225 (MQ=255) cTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGCTGTCGATCTCCTCCGTCAGCCCCAGGGTGACCG‑C‑TTCTCCGGAAAAGGCTTCTTCGCGATCACCACCAAAAGTCACCACCCGCCCG‑ACGTTTGATT‑CCCCACCGAAGGGCAGCACTTTGACCCGTTGCCCCACTTTCaa > 2:649396/1‑227 (MQ=255) cTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCCCG‑CCGTTTGTTT‑CCACACCCGAGGGCAGCCCTTTGACACGTTGCCCGACTTCCa > 1:378264/1‑227 (MQ=255) aTCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGTCAAAGGCTTCTTCGCGATCACCATCACAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCATAGGTCAGCACTTTGACACGTTGCCCGCCTTCCACGCGCCCGGTGGCCAGCGTTcc > 1:184213/1‑228 (MQ=255) aTCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGATCCCCGACTTCCACGCGACCGGATTCCACCGTTcc > 1:347477/1‑228 (MQ=255) aTCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGGGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCCGAGGGAAGCACTTTCACACGTTGCCCGACTTCCACGCGACCGGTAGCCGACGTTcc > 2:309460/1‑228 (MQ=255) aTCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCACCACCAGGGGGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCCCGATCACCATCAAAAGTCACGATCCGCCCG‑ACGTTTGATTCCCACCCCA‑AGGGCAGCACTTTTACACGTTTCCCGCGTTCCACCCACCCGGAGTCCAGCGTTcc > 2:596749/1‑228 (MQ=255) gACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGGGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCACG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCCACCGGATGCCCGCGTTCCGGccgaa > 2:526843/1‑224 (MQ=255) gcgcTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGCTCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCT‑CCGTTTGATT‑CCACACCCGAGGGCCGCACTTTGCCCCGTTGCCCGCCTTCCCCGCGACCGATGGCCACCGTTCCGCCGTAcccc > 1:198785/1‑227 (MQ=255) gttcggccccgccgGTACCGCTTCGGCTGCCGCCAGCAG‑CAGTTCGCCAAGGCTGATTACGATCCCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACg < 1:316848/220‑1 (MQ=255) ccgGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGCAAATCGAGAt > 1:88515/1‑228 (MQ=255) cgGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCAACCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCCCGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGAAGCACTTTGACACGTTGCCCGACTTCCACCAGACCGGGTGCCAGCGTTCCGGGGCAACACCGAAAAtgcaaat > 2:433251/1‑221 (MQ=255) tAACGCTTCGTCTGCCGGCAGGAG‑CAGATCGCCCCGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGAACG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCgg < 2:13350/228‑1 (MQ=255) cTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGGCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGAt < 1:436081/228‑1 (MQ=255) tccgcTGCCTCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTa < 1:433251/224‑1 (MQ=255) tCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGGGATTCGGGCGAtt > 1:199347/1‑227 (MQ=255) tGCCGCCAGCCG‑CAGATCGCCACGGCTGATGGCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTa < 1:127976/228‑1 (MQ=255) tGCCGCCAGCAG‑CAGATGGCCCCGGCTGATGCCGATCTCATCCGTCAGCTCCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTa < 1:309460/228‑1 (MQ=255) gccggcAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCCCCGGCAAAGGCTTCTGCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTa < 1:380095/227‑1 (MQ=255) gccgccAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTa < 1:373452/227‑1 (MQ=255) ccAGCAG‑CAGACCGCCACGGCTGATGTCGATCTCACCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCa < 1:196289/228‑1 (MQ=255) gATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCCCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGGGATTAACCGAATGCCCCGGGAAgc > 2:638406/1‑228 (MQ=255) cGCCACGGCTGATGTCGATTGCATCCGTCAGCACCAGGGTGATCG‑C‑TTCGCCGGCAAAGGCTTCCTCGCGATCACCATCAAAAGTCACGATCCGCTCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑Ca < 1:596749/228‑1 (MQ=255) acggatgagatcGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTCACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACTGAAATCGACATTCGGGCGATTAAGGTCCTTGACC‑GGAAGAGCCATTGGCTGAGCCT‑cc > 2:374057/12‑228 (MQ=255) tctcCTCCCTCCGCACCAGGGTGATCG‑G‑TTCCTCGGCAAAGGCTTTCTCGCGATCACCAACAAAAGTCACCATCCG‑GCGCACTTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑ccacca < 2:359783/228‑1 (MQ=255) tctcACCCGTCAGCACCAGGGTGAGCG‑C‑TTCTCCGGCAAAGGCTGCTTCGCGATCACCAGCAAAAGTCACGAACCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑ccacca < 2:89041/228‑1 (MQ=255) cccacccGTCAACACCATGGTTATCG‑C‑TCTACCGGAAAAGGCTTTTCCGCTATCACGATCAAAGGTCACGATCCGCGCG‑CTGTTTGATC‑CCACACCAGAGGGCCGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑ccacca < 2:347477/222‑1 (MQ=255) ccAGGGTTATCG‑C‑TTCCCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCC‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CCACCACTCGCTGGATCTCCa < 1:644413/228‑1 (MQ=255) cAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAACTCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CCACCACTCGCTGGATCTCCa > 1:122286/1‑227 (MQ=255) aGGGTGATCG‑C‑TTCCCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CCACCACTCGCTGGATCTCCACg < 1:37861/228‑1 (MQ=255) aGGGTGATCG‑C‑TTCCCCCGCAAAGGCTTCTTCCCGATCCCCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACCCCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CCACCACTCGCTGGATCTCCACg < 1:638406/228‑1 (MQ=255) gggTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCTGGCGATTAACGTACTGCACCGGGAAGGG‑CATTGTCCGAGCAT‑CCACCACTCGCGGGAACCCCACgg > 2:89142/1‑228 (MQ=255) aTCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCTGGCGATTAACGTACTGCACCGGGAATCG‑CATTGGCTGTGCAT‑CCCCCACTCGCTGGATATCCACGGTTTcc > 1:21444/1‑228 (MQ=255) aTCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CCACCACTCGCTGGATCTCCACGGTTTc > 1:481791/1‑227 (MQ=255) aTCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGAAATTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACTACCTGCACCCGGAACCG‑CATTGGCACA‑CATACCACCACTCGCTGGTtccacccgtgttc > 2:92298/1‑216 (MQ=255) tCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCCCCGCGACGCG‑CATTGGCTGGGCAT‑CCCCCACTCCCTGACTACCCCCGGTTTccc > 2:46976/1‑227 (MQ=255) tccc‑TTCCCCGGCAAAGGTTTCTTCGCGATCCCCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGCCACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CCACCACTCGCTGGATCTCCACGGTTTCCa < 1:243018/225‑1 (MQ=255) cG‑C‑TTCCCCGGCAAAGGCTTCTTCGCGATCCCCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CCACCACTCGCTGGATCTCCACGGTTTCCa < 1:541391/227‑1 (MQ=255) cG‑C‑TTCACCGGCAAAGGCTTCTGCGCGATCACCATCAAAAGCCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CCACCACTCGCTGGATCTCCa < 1:46976/218‑1 (MQ=255) ctcCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑cc > 2:247456/1‑62 (MQ=255) ctcCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGCGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAACTCGCGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CAACCACTCGCTGGATCTCCCCGGGTTcaaaacctc > 2:551590/1‑220 (MQ=255) ctcCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGCCTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGCTTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CAACCACTCGCTGGATCTCCACGGTTTcacgaactt > 1:164457/1‑220 (MQ=255) tcCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑Cca < 1:247456/62‑1 (MQ=255) | TTAATATCAACCTGATAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGGCTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CCACCACTCGCTGGATCTCCACGGTTTCCAGCACTT > NC_000913/2874287‑2874731 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |