| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,630,551 | A→G | 11.3% | S121S (TCT→TCC) | ydfI ← | putative NAD‑dependent D‑mannonate oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,630,551 | 0 | A | G | 11.3% | 133.4 / 2.3 | 56 | S121S (TCT→TCC) | ydfI | putative NAD‑dependent D‑mannonate oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (21/28); new base G (4/3); total (25/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGTAGGAAGTGACAACGTCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTAC‑GGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCAACGGTATAAAGATTATCTTGCTGTTGTAAATCGGCAATTTGCTGTTCGCCGCCGATTAAGTTGACCTCATAATATCCCCAGTCACTGAAATGTTCCGTAGCAAGAATA > NC_000913/1630316‑1630788 | cGTGGGAAGTGACAACCTACCGCATAACTGGACCGTTTTCGGGTATGTTGTCACATGCAATGCAGGTAAATGCGGGAAGTCCTGCCGCTTTAC‑GGCGAGCCCGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCagaga < 2:489102/238‑1 (MQ=255) gTGACAACGTCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTAC‑GGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCTGCAGCTACCATCGGGAGATCGAGCATTAACTGTCCGGTCGCCGGGGAGTGGTAATACCCTTTTTCGGAGATTGTCAGGGAGACAAAcgc > 1:268149/1‑239 (MQ=255) aCAACGTCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTAC‑GGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑t > 1:146477/1‑239 (MQ=255) aCGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTAC‑GGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGGGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGt > 2:668011/1‑238 (MQ=255) aCATGACCGTTTTCTGGCATGTTGTCACATAACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTAC‑GGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGCGAGGGGAAATACCCTTTTTCGGGAATTGTCAGAGAGAAAATCGCCA‑TTTGCGGTTccacac > 1:254332/1‑233 (MQ=255) cattacttttttCTGGCGTTTTGGCACGTGGCAGGACGGTAAAGTCGGGAAGTCTGGGCGCGTTCC‑GGGGAGCCAGCGCATCAACAATCACCCCTGTTGGGGTTTTCGGCTGGTGGGGATTTTGCAAGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATc < 2:19268/231‑1 (MQ=255) aCCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTAC‑GGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGGTTGTAAGGAAGACAATCACGA‑TTTGCGGCTca‑caccacact > 1:376382/1‑232 (MQ=255) aCCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTAC‑GGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGGGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGGGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTTATTGCAAGAGAGGCAACCGCGA‑TTTGGGGTTcc‑caactccct > 2:47120/1‑231 (MQ=255) ttCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTAC‑GGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCCCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACACTCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAac > 1:25794/1‑238 (MQ=255) tCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTAC‑GGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAacac < 1:353133/239‑1 (MQ=255) gtggcacaTTACATGGCGGTAAATGCGGGGAGGCCTGCCGCTTTAC‑GGCGAGCCCGCGCCTCAACAATCCCCCCTGGTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTa < 1:10973/234‑1 (MQ=255) tttCACATGGCATGACCGTAAATGCGGCAAGTCCTGCCGCTTTAC‑GGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGGCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAg < 2:481602/237‑1 (MQ=255) tgacGGTAAATGGGGGAAGTCCGGTCGCTTTAC‑GGCGAGCCAGCGCCTCAACAATCGCCCCTGTTGCCGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGt < 2:146816/239‑1 (MQ=255) tgacGGTAAATGCGGGAAGTCCTGCCGCTTTAC‑GGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTTTCAAGGAGACAATCCCGA‑TTTGCGGGTCC‑CACCCCGC‑TCCCCAACCGGTTTCTAAGCAATCTA‑TCTGt > 2:687716/1‑239 (MQ=255) ggTAAATGCGGGAAGTCCTGCCGCTTTAC‑GGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTg > 1:10752/1‑189 (MQ=255) ggTAAATGCGGGAAGTCCTGCCGCTTTAC‑GGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTg < 2:10752/189‑1 (MQ=255) gataTGCGGGAAGTTTTGCCGTGTTGC‑GGCGAGCCAGCCCCTCAAAAATCACCCCTGTTGCTGGTTTCGGCTGGTGGGGATTTTGGACGTCGGCAGATACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGc < 2:556731/236‑1 (MQ=255) ccTGCCCGTTTACGGGAGAG‑CAGCGCCTCAACAATTCCCCCTGGTGCTGGTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAac < 1:855507/239‑1 (MQ=255) ttAC‑GGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGCAATACCCTTTTTCGGTGATTGTCAGAGAGGCAATCGCGA‑TTTGCGGTTCACCACTTC‑C‑TGCCAACACGGTTTCTCAGCCCTCTT‑TTTTTACGGCCAAGGCCTTTTTAaagaccaccaa > 2:39069/1‑233 (MQ=255) aGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGa < 1:775942/238‑1 (MQ=255) gCCATCGCCTCAACAATCCGCTCGTTTGCTGTTTTCGGCGTGTGGGGATTTGGCAGGTCGGCAGCTTCTATCGGGTTATCGAGTATTATCTGTCCGGTCTCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTATAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAg < 2:268149/238‑1 (MQ=255) cgcCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAAAGACAATCGCGA‑TTTGCGGTTCC‑TACATCGC‑TGCCAACACGGTTTCCAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACCCGACCCGT‑c > 1:630813/1‑238 (MQ=255) taaaaaaccacccTGGTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCCTCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑Ccacaca < 1:238093/229‑1 (MQ=255) tCACCCCTGTTGTTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGGTCGAGCATTAACTGTCCGGTCGACGGAGAGTTGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGcc < 1:422901/239‑1 (MQ=255) tCACCCCTGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTCCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACACCGCCAACGACCCGAGCCGT‑CCCCAAATAGGc > 1:345991/1‑238 (MQ=255) aCCCCTGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGGGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTTTAAGCCCTCTA‑TCTTTACGTGCAAGGCTTTTTTAACGACCCCAACACCGCCAACCGTCCcacacacgcccgc > 2:883535/1‑232 (MQ=255) cccTGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTTTCAGAGAAACAATGCGGA‑TTTGCGGTTCA‑C‑CATCGCTTGCCACAACGG‑TTCTTAGCCCTCTATTCTGTCGGTCCAAGCCTTTTTTAACAAGGCCACGGACCCGAGCGGC‑CCCCAC‑TCGGcccgcca > 1:140902/1‑234 (MQ=255) tGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCCCGA‑TTTGCGGTTCA‑CGCATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGGGCAAGGCTTTTTTAAAGACCCCAACGAACCAGACCGT‑CCACAAAACGGCCGACaat > 2:358727/1‑236 (MQ=255) gTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAAAATGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGTTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCACCGACGCGAGCCGT‑CACCACATCGGACGCCAttt > 1:34481/1‑238 (MQ=255) tGCTGTTTTCGGCTGGGGGGGATTTTGCACGTCGGAAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCg < 1:890002/239‑1 (MQ=255) gttttttCGGCTGGGTGGGTTTTTGCCCGTCGGCAGCTGCCATCGGGTGGTCGGGCATTAACTGTCCGGTCCCCGGGGGATGGAAATTCCCTTTTTCGGTGAGTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGGCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCa < 2:443795/236‑1 (MQ=255) cTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACCCGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACACCCGGAGCCGT‑CCACACCTCGGCCGACCTTTCCGCa > 1:462686/1‑239 (MQ=255) ttttttCGGCTGGGGTGGGTTTTGCCCGGCGGGAGCCTCCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATGCCCTTTTTCGGGTATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCaa < 2:621496/237‑1 (MQ=255) tGTTTTCGGCTGGTTGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGGCCGGTCGCCGGGGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCa < 1:269919/238‑1 (MQ=255) ttCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCC‑CACATAGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTTGACGTGCAAGGCTTTTTTACCGGCGCCAACAACACGAGCCGT‑CCACCCATCCGCCCAACTTTCCGCacgggg > 2:709287/1‑234 (MQ=255) aTTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATTCCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCAACGGTATAAAGATTATCt < 1:39069/238‑1 (MQ=255) aCCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCCCACATCGGCCGACATTTCCGCAACGGTATAAAGATTATCTTGCTGTTGTAAATCGGCAAt > 1:348861/1‑239 (MQ=255) ctggCATTAACTGTCCGGGCGCCGGAGAGGGGAAATCCCCTTTTCCGGTGATTGTCAGAGAGACAATCGCTA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCGGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCAACGGTATAAAGATTATCTTGCTGTTGTAAATCGGCAATTTGCTGTTcgcc < 1:443718/235‑1 (MQ=255) aTTAACTGTCCGGTCGCCGGAGAGTGGAAATCCCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCAACGGTATAAAGATTATCTTGCTGTTGTAAATCGGCAATTTGCTGTTCGCCGCCGa < 1:47120/238‑1 (MQ=255) aCTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGCCATTTCCGCAACGGTATAAAGATTATCTTGTTGTTGTAAATCGGCAATTTGCTTTTCCCCCCCGATTaaa > 2:541012/1‑238 (MQ=255) tGTCCGGTCGGCGGAGGGTGGAAATCCCCTTTTGGGGGGATTGGCAGAGTGACAATCGCGA‑TTTGGGGTTCA‑CACATCGC‑TGCCAACCCGGTTTATAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACTTCGGCCGACATTTCCGCAACGGTATAAAGATTATCTTGCTGTTGTAAATCGGCAATTTGCTGTTCGCCGCCGATTAAGtt < 2:345991/239‑1 (MQ=255) ctttcgttCGCCGGGGATTTAAAATACCCTTTTTCGGTGTTTGCCAGAAAGACTAGC‑CGATTTTGCGGTTCA‑CAACTCGC‑TTCCATCACGGTTTCAAAGCCAACTA‑TCTGTACGTGCAAGGCTTTTTTAACGGCGCCAACGACGCGAGCCGT‑CCCCACTTCAGCCGACATATCCGCAACGGTATAAAGATTATCTTGCTTTTGTAAATCGGCAATTTGCTGTTCGCCGCCGATTAAGtt < 2:376382/232‑1 (MQ=255) gTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGGGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGAAGCGAGCCGT‑CCACACATCGGCCGACCTTTCCGCCACGGTCTAAAGATTATCTTTATGTTGTAAATCGGCAATTTTCTGTTGGCCCACGGTTaattg > 2:294034/1‑235 (MQ=255) cgggccccGGGGAGTGGAAATCCCCTTTTTCGGTTATTGTGAGGGATACAAACGGGT‑TTTGCGGTTCC‑CAAATGCG‑TGCCAACACGGGTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGTCGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCAACGGTATAAAGATTATCTTGCTGTTGTAAATCGGCAATTTGCTGTTCGCCGCCGATTAAGTTGAcc < 2:25794/233‑1 (MQ=255) cGGTCGCCGGGGAGTGGAAATTCCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACAGCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCAACGGTATAAAGATTATCTTGCTGTTGTAAATCGGCAATTTGCTGTTCGCCGCCGATTAAGTTGAcc < 2:420480/239‑1 (MQ=255) cGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACCCGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCAACGGTATAAAGATTATCTTGCTGTTGTAAATCGGCAATTTGCTGTTCGCCGCCGATTAAGTTGAcc < 1:687716/239‑1 (MQ=255) ggTCGCCGGAGAGTGGAAATTCCCTTTTTCGGTGATTGTCAGAGAGACAATCGAGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCAACGGTATAAAGATTATCTTGCTGTTGTAAATCGGCAATTTGCTGTTCGCCGCCGATTAAGTTGACCt < 1:169191/239‑1 (MQ=255) ggTCCCCGGAGAGGGGAAATACCCTTTTTCGGTGATTGTCAGGGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACAAGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGAAGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCAACGGTATAAAGATTATCTTGCTGTTGTAAATCGGCAATTTGCTGTTCGCCGCCGATTAAGTTGACCt < 1:294034/239‑1 (MQ=255) cGCCGGAGAGTTGAAATACCCTTTTGCGGTTATTGGCAGGAAGCCAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCAACGGTATAAAGATTATCTTGCTGTTGTAAATCGGCAATTTGCTGTTCGCCGCCGATTAAGTTGACCTCat < 1:901985/239‑1 (MQ=255) gTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGACGACATTTCCGCAACGGTATAAAGATTATCTTGCTGTTTTAAATCGGCAATTTGCTGTTCACAGCCGATTAAGTTGACCTAATAAAATcccc > 2:693436/1‑239 (MQ=255) ggAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCAACGGTATAAAGATTATCTTGCTGTTGTAAATCGGCAATTTGCTGTTCGCCGCCGATTAAGTTGACCTCATAATATcccc < 1:668011/237‑1 (MQ=255) aaTCCCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCAACGGTATAAAGATTATCTTGCTGTTGTAAATCGGCAATTTGCTGTTCGCCGCCGATTAAGTTGACCTCATAATATCCCCAGTCa < 1:709287/239‑1 (MQ=255) cccTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCAAc < 1:319699/153‑1 (MQ=255) cccTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCAAc > 2:319699/1‑153 (MQ=255) cccTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCAACGGTATAAAGATTATCTTGCTGTTGTAAATCGGCAATTTGCTGTTCGCCGCCGATTAAGTTGACCTCATAATATCCCCAGTCACTGa > 1:109078/1‑239 (MQ=255) tttCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCAACGGTATAAAGATTATCTTGCTGTTGTAAATCGGCAATTTGCTGTTCGCCGCCGATTAAGTTGACCTCATAATATCCCCAGTCACTGCAATGt > 1:273867/1‑239 (MQ=255) ttttCAGAGAGTCAATCGCGA‑TTTGCGGTTCC‑CACACCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCAACGGTATAAAGATTATCTTGCTGTTGTAAACCGGCAATTTGCTGTTCGCCGCCGATTAAGTTGACCTCATAATATCCCCAGTCACTGAAATGTTCCGTAGc < 2:348861/235‑1 (MQ=255) gagagaCAATCGCGA‑TTTGCGGTTCA‑CGCATCGC‑TGCCAACCCGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCAACGGTATAAAGATTATCTTGCTGTTGTAAATCGGCAATTTGCTGTTCGCCGCCGATTAAGTTGACCTCATAATATCCCCAGTCACTGAAATGTTCCGTAGCAAGAata < 1:358727/239‑1 (MQ=255) | CGTAGGAAGTGACAACGTCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTAC‑GGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGTGGGGATTTTGCACGTCGGCAGCTACCATCGGGTGATCGAGCATTAACTGTCCGGTCGCCGGAGAGTGGAAATACCCTTTTTCGGTGATTGTCAGAGAGACAATCGCGA‑TTTGCGGTTCA‑CACATCGC‑TGCCAACACGGTTTCTAAGCCATCTA‑TCTGTACGTGCAAGGCTTTTTTAACGACGCCAACGACGCGAGCCGT‑CCACACATCGGCCGACATTTCCGCAACGGTATAAAGATTATCTTGCTGTTGTAAATCGGCAATTTGCTGTTCGCCGCCGATTAAGTTGACCTCATAATATCCCCAGTCACTGAAATGTTCCGTAGCAAGAATA > NC_000913/1630316‑1630788 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |