| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,403,737 | T→C | 8.3% | L85P (CTC→CCC) | acuI → | putative acryloyl‑CoA reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,403,737 | 0 | T | C | 8.3% | 200.0 / 2.6 | 70 | L85P (CTC→CCC) | acuI | putative acryloyl‑CoA reductase |
| Reads supporting (aligned to +/- strand): ref base T (30/33); new base C (3/4); total (33/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
CAGGACGGCAAAACTCTCGCATCAGTACAGACTCTGGACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGCCGGTTTTACCGCCATGCTGTGTGTGATGGCGCTGGAAGATGCCGGTGTTCGCCCGCAGGACGGGGAGATTGTCGTGACGGGTGCCAGTGGTGGCGTCGGCAGTACCGCCGTG > NC_000913/3403508‑3403975 | cagGACGGCAAAACTCTCGCATCAGTACAGACTCTGGACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGGGTTACTCCctggctg > 1:501199/1‑239 (MQ=255) aaaCTCTCCCCTCAGTACCGACTCTGGACGAAAGTCGCCTGCCGGAGGGCGATTTCACGGTCGATGTTCACTGCGCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCCTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGt < 1:906875/239‑1 (MQ=255) cgctcGCATCCGTACAGACTCTGGGCGAAAGTCGCCTGCCGGATGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGaa < 1:283272/237‑1 (MQ=255) cctccgtaTCAGTACAGGCTTGGGACGAAATTCGCCTGCTGGAGGGAGATGGCACGGTCGATGTTCAATGGTCGAGCCTGAACTATAAA‑GATGCGCTGGTGATTCCCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGaa < 2:448002/232‑1 (MQ=255) gCATCAGTACAGACTCTGGACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAAcc > 1:853841/1‑238 (MQ=255) ccctccgtccAGACTTCGGAAGAAAGGCGCCTGCCGGGGGGCGATGTCACGGTCTATGTTGACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCa < 2:772423/230‑1 (MQ=255) tACAAACTCTGGAAGGAAGTCCGCTGCCGGGGGGCGATGGCACGGTCGATGTTCACGGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTGCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCGCCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTgggg < 2:501199/238‑1 (MQ=255) cgACTTTGGAAGAAAGTCGCCTGCGGGGGGGGGCTGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAACCATCCGTAATTTGCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTggg < 2:369426/238‑1 (MQ=255) aCTCTGGACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTCCCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATTCCGGTCAGGAGGTGTTACTCACTGCCTGGGGGGTTGGGGAAAACCACTGGGGTgg > 1:122924/1‑236 (MQ=255) aCTCTGGACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGCACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCCGGCGGCGTTACTCACTGGCTGGGGCGTTGGTGAAAACCAATTGGGTgg > 1:886016/1‑236 (MQ=255) aCTCTGGACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGGGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTgg > 1:750979/1‑236 (MQ=255) ccttGGACGAAAGTGGCCTGCCGGAGGGCGATGGCACGGTCGATTTTCACTGGTCGGGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAAGTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTggg < 2:853841/233‑1 (MQ=255) tctGGACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGaa < 1:846817/220‑1 (MQ=255) tGGACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGGGTTACCCACTGGCTGGGGCGTTGGTGAAAACCCCTGGGGGGGGCggggg > 2:625968/1‑237 (MQ=255) cggACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGGAAACCACTGGGGGGGGCTGGCg > 1:903197/2‑239 (MQ=255) ggACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCGGGTGGTGTTACCCACGGGATGGGGCGGTGTGGAAAACCACTGGGGGGGGATGGCgg > 1:379046/1‑239 (MQ=255) ggACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGGGGGGTTACTCACTGGCTGGGGCGTTGGGGAAAACCACGggggggggggggggg > 2:718957/1‑232 (MQ=255) ggACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTc < 2:94842/196‑1 (MQ=255) ggACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTc > 1:94842/1‑196 (MQ=255) ggACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGGGTTACTCCCTGGCTGGGGGGGTGGGGAAAACCCCTGGGGGGGGGcggcgg > 2:549312/1‑239 (MQ=255) aGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCCGGAGGTGTTACTCACTGACTGGGGCGTTGGCGAAAACCACTGGGGTGGGCTGCCCGAGCCGgc > 1:84147/1‑239 (MQ=255) aGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCAGGGGCGTTGTTGACAAc > 1:238634/1‑213 (MQ=255) cGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGaa < 1:56617/238‑1 (MQ=255) aTGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGACCCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGCGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGGGActgg > 1:206704/1‑239 (MQ=255) aTGTTCACTGGCCGAGCCTTAACTATAAA‑GATGCGCTGGCGATTGCCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCAt < 1:411532/238‑1 (MQ=255) cACGGGGCGAGCCTGGACTATAAAGGGTACG‑TGGCGAGTCCCGGTAGGGGAAAAATCATCCGTAATTTTCCGATGATTCCTTGGATCGATGTTGGCGGAACTGTACGCTCCAGCGAAGATCCGCGTTTTCATGCCGGTCGGGAGGGGTTACTCACTGGCTGGGGCGTTGGGGAAACCCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCa < 2:404622/239‑1 (MQ=255) tCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCa < 1:622296/173‑1 (MQ=255) tCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCa > 2:622296/1‑173 (MQ=255) tCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGGGACGGCGGGGGGGGAAGGGGACGGGCTGGGTGCCATCCCCCAAggggg > 2:176759/1‑237 (MQ=255) cgcTGAACTTAAAA‑GGTGCGCTGGCAATTACCGGTAAGGGAAAAATCCTCCGTAATTTTCCGATGATTCCTGGGATCGATTGTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGAc < 1:23333/237‑1 (MQ=255) ttaAA‑GATGCGCTTGGGATTCCCGGTAAGGG‑AAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAg < 1:710953/238‑1 (MQ=255) taAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCActggctg > 2:439038/1‑141 (MQ=255) taAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCActggctg < 1:439038/141‑1 (MQ=255) taAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGGGAGTGAAAGGTGACTGGCCGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAg > 1:400709/1‑239 (MQ=255) taAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAg < 1:608410/239‑1 (MQ=255) aTGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGGGAAAGGTGACTGGCTGGTTGACATGCCGCAAGGGCTGGACGAGGGCAAAGCAATg > 1:139755/1‑239 (MQ=255) cgcTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGAtt > 1:654604/1‑239 (MQ=255) cgcTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGGGAAAGGGGACTGGCTGGTTGCCCTGCCGCAAGGGCTGGAGCCGCGGAAAGCAAGGAtt > 1:47753/1‑239 (MQ=255) tGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTAt < 1:549312/238‑1 (MQ=255) gggttACCGGTAAGGGAAAAATTCTCCGTAATTTTCCGTTTATTCCTGGGATCGATTTTGCCGGAACGTTACGCCCCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCgg < 2:287868/235‑1 (MQ=255) ctaTTACCGGTAAGGGAAAAATCATCCGTAAGTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGAACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCgg < 1:176759/236‑1 (MQ=255) ccaTTACCGGTAAGGGAAAAATCATCCGTAATTTCCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCgg < 1:291490/236‑1 (MQ=255) ccGGAAAGGGAAAAATCCCCCGCTATTTCCCGATTATTCCTGGGGTCGTTTTGGCCGGACCTGTACGCCCCGGCGAAGATCCGCGTTTTCATGCCGGTCGGGAGGTTTTACTCACTGGCTGGGGCGTTGTTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGcc < 2:654604/239‑1 (MQ=255) gTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGAAGCGGGTAAGGCAATGATAATCGGTAATGCCGGt > 1:681441/1‑239 (MQ=255) gAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCCCCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGCCGGTTTTa < 1:625968/237‑1 (MQ=255) aaaaaaTCATCCGTAATTTTCCGATGATTCCTGGTATCGATTTTGCCGGAACTGTTCGGACCAGCGAAGATCCGCGTTTTCAGGCCGGTCAGGAGGTGTTACCCACTGGCTGGGGCGTTGGTGAAACCCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGCCGGTTTTa < 1:915018/236‑1 (MQ=255) aaaTCCTCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGTTCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGCCGGTTTTACCGcc < 1:718957/239‑1 (MQ=255) aaaTCATCCTTATTTTTCCGTTTTTTCCTGGGTTCGTTTTTGCCGAGACGGTCCGCCCCGGGGAAGTTCCGGGTTTTCATGCCGGTCAGGAGTTGTTACTCCCTGGTGGGGGCGTTGGTGAAAACCCTTGGGGGGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCAGGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGCCGGTTTTACCGcc < 2:47753/239‑1 (MQ=255) aaTCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCa < 2:786731/186‑1 (MQ=255) aaTCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCa > 1:786731/1‑186 (MQ=255) tcCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGGGGGAAAGGGAACCGGCGGGTTGCCATGCCCCCAGGGGTGGGCCCGCGCAAAAGAATGATTTTTGGTCATGCCGGGTTTTACGCCCTgggg > 2:896904/1‑236 (MQ=255) tCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGCCGGTTTTACCGCCCTGCTGTTCGGGATGGCGCTGGAAg > 1:15064/1‑239 (MQ=255) ggggagtGTCCGCACAGGGGAATATCCGGGTTTTCAGGCCGGTTGGGGGGTGTTACCCCCGGGGTGGGGCGTGGGTGAAACCCCCGGGGGTGGGCTGGCGGGGCAGGCGCGGGTGAAAGGTGCCGGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGCCGGTTTTACCGCCATGCTGTGTGTGATGGCGCTGGAAGATGCCGGTGTTCGCCCg < 2:522080/232‑1 (MQ=255) cGGAACTGTCCGCCCCAGGGAAGTTCCGCTTTTTCATGCCGGTCAGGAGGTGTTACTCGCTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGCCGGTTTTACCGCCATGCTGTGTGTGATGGCGCTGGAAGATGCCGGTGTTCGCCCGc < 1:135795/239‑1 (MQ=255) tACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGGGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGCCGGTTTTACCGCCATGCTGTGTGTGATGGCGCTGGAAGATGCCGGTGTTCGCCCGCAGGACggg > 1:522080/1‑239 (MQ=255) aCGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACCCACTGGCTGGGGCGTTGGTGAAGACCACTGGGGTGGGCTgg > 2:351026/1‑89 (MQ=255) aCGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACCCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTgg < 1:351026/89‑1 (MQ=255) ccaagggAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTCCTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGCCGGTTTTACCGCCATGCTGTGTGTGATGGCGCTGGAAGATGCCGGTGTTCGCCCGCAGGACGGGgaga < 1:531293/232‑1 (MQ=255) ttCCGGGTTTGCAGGCCGGTCAGGGGGTTTTACCCCCTGGCGGGGGGGTTGGGGAAACCCGATGGGGTGGGCTGGCGGAGCAGGCGCGAGTTAAAGGTGCCTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGCCGGTTTTACCGCCATGCTGTGTGTGATGGCGCTGGAAGATGCCGGTGTTCGCCCGCAGGACGGGGAGATTGTCGTGACg < 1:135527/238‑1 (MQ=255) cgTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGCCGGTTTTACCGCCATGCTGTGTGTGATGGCGCTGGAAGATGCCGGTGTTCGCCCGCAGGACGGGGGGATTGTCGTGACGGGGGc > 1:395625/1‑239 (MQ=255) tgtTACTCACTGGCTGGGGCGTTGGTGAAAACCACTgtgg < 1:847321/40‑1 (MQ=255) tgtTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGCCGGTTTTa < 1:705221/141‑1 (MQ=255) gtTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGCCGGTTTTACCGCCATGCTGTGTGTGATGGCGCTGGAAGATGCCGGTGTTCGCCCGCAGGAGGGGGAGATTGTCGTGACGGGTGCCAGGGGTGGCGTCGGCCGTAcc > 1:882867/1‑238 (MQ=255) ttACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGAc > 1:452368/1‑102 (MQ=255) ttACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGAc < 2:452368/102‑1 (MQ=255) ttACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGAtt > 1:656077/1‑120 (MQ=255) ttACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGAtt < 2:656077/120‑1 (MQ=255) ttACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGcc < 1:848035/132‑1 (MQ=255) ttACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGAAATGGTTATCGGTACTGcc > 2:848035/1‑132 (MQ=255) aCTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGCCGGTTTTACCGCCATGCTGTGTGTGATGGCGCTGGAAGATGCCGGTGTTCGCCCGCAGGACGGGGAGATTGTCCGGACGGGTGCCCGGGGGGGGGTCGTCAGGAccggcg > 1:687793/1‑239 (MQ=255) tCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGCCGGTTTTACCGCCATGCTGTGTGTGATGGCGCTGGAAGATGCCGGTGTTCGCCCGCAGGACGGGGGGATTGTCGTGACGGGTGCCAGTGGGGGCGTCGGCAGTACCGCCGTg > 1:909480/1‑239 (MQ=255) | CAGGACGGCAAAACTCTCGCATCAGTACAGACTCTGGACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAA‑GATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGCCGGTTTTACCGCCATGCTGTGTGTGATGGCGCTGGAAGATGCCGGTGTTCGCCCGCAGGACGGGGAGATTGTCGTGACGGGTGCCAGTGGTGGCGTCGGCAGTACCGCCGTG > NC_000913/3403508‑3403975 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |