New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 845711NA (NA)4 (0.050) 4/270 11.4 NA noncoding (81/99 nt) RIP78 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP78 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 = 845722 NA (NA)noncoding (92/99 nt) RIP78 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP78 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
Rejected: Coverage evenness skew score above cutoff.

TTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGC  >  NC_000913/845571‑845849
                                                                                                                                            |                                                                                                                                          
tttCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATaa                                                                                                                                          >  2:592041/1‑143 (MQ=255)
tttCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATaa                                                                                                                                          <  2:1235734/143‑1 (MQ=255)
tttCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATaa                                                                                                                                          >  2:679832/1‑143 (MQ=255)
  tCGGGTGACAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGc                                                                                                                                        <  1:167953/143‑1 (MQ=255)
   ctggTGAAAGGGAGTAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCg                                                                                                                                       <  1:1265552/141‑1 (MQ=255)
         aaaGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAgcgc                                                                                                                                 >  1:839224/1‑143 (MQ=255)
           aGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCAt                                                                                                                               >  2:430952/1‑143 (MQ=255)
            gggAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGGGCATc                                                                                                                              >  1:501184/1‑143 (MQ=255)
            gggAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATc                                                                                                                              <  1:737514/143‑1 (MQ=255)
              gaggaAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAg                                                                                                                            >  2:283672/1‑143 (MQ=255)
               aggaAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTCGCGCGTCAgg                                                                                                                           >  1:820069/1‑143 (MQ=255)
               aggaAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAgg                                                                                                                           <  2:1001453/143‑1 (MQ=255)
                 gaAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCAGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAACTTTAATAAGTTGCAAGATACCATATAAGACTAATCAGCGAAGCGCATCACGCa                                                                                                                         >  2:422578/1‑143 (MQ=25)
                     ggATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtgt                                                                                                                     <  2:167293/143‑1 (MQ=255)
                     ggAGATTAAGCAGGTGGCTGACCGCGTGCGGGCTTTTTTGCCGGATGCGGCGTTTACGTCTTATCCGTCCTACAAGTTCATGCAATTGAAATAAGTAGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAcgt                                                                                                                     <  1:480029/143‑1 (MQ=25)
                           tgggCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCtta                                                                                                               <  1:951811/140‑1 (MQ=255)
                           tAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCtta                                                                                                               <  1:951879/143‑1 (MQ=255)
                            aaGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCttat                                                                                                              >  1:985216/1‑143 (MQ=255)
                                aGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAag                                                                                                          <  1:158494/143‑1 (MQ=255)
                                 ggTTGCTGACAACGTGCGGGAATCGTTGCAGGAGGCGGCGGAAACGCCTTATCCGTCCTACGAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAaga                                                                                                         <  1:1110983/143‑1 (MQ=25)
                                  gTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCCTGCACTTATAATAAGTTGCCCGATATCCTGTGGGCCCGCTAAACGTAGCGCGTCAGGCAATGTGTCTTACTAacag                                                                                                        >  2:781117/1‑143 (MQ=37)
                                       tGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGtg                                                                                                   <  1:1089916/143‑1 (MQ=255)
                                       tGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGta                                                                                                   >  1:561148/1‑142 (MQ=255)
                                        gACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTACTATGTGTCCAGATGTACACCCAACCGTATAAGCGTAGCGCCTCAGGCACTGTGTCTTATTAAGAGACGtgc                                                                                                  >  2:305255/1‑143 (MQ=25)
                                          cAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCGATGTGTCTTATTAAGAGACGtgctg                                                                                                >  2:658857/1‑143 (MQ=255)
                                              gggCGGGCTTTTATGCCGGATGCGGCGTGAACGCCTCATCCGTCCCACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCaaa                                                                                            <  1:1183245/141‑1 (MQ=255)
                                              gTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCTTGATACGCGTAGCGCATCAGGCAGTGTGTCTTATTAAGAGACGGGCCGCaaa                                                                                            >  1:193492/1‑143 (MQ=37)
                                               tgagggCTATATAGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCAGGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCaaaa                                                                                           <  2:680705/140‑1 (MQ=37)
                                                     cTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGATACGTGCTGCAAAAATTACt                                                                                     >  1:283614/1‑143 (MQ=255)
                                                     cTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCt                                                                                     <  2:873439/143‑1 (MQ=255)
                                                     cTTTGTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCt                                                                                     <  2:965139/143‑1 (MQ=255)
                                                       tttttGCCGTAGTCTGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATGTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGc                                                                                   <  2:103458/143‑1 (MQ=38)
                                                        ttttGCCGGATGCGGCGTGAACGCCTTATCCGTCGTACAAGTTCATGAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCaa                                                                                 <  2:340494/143‑1 (MQ=255)
                                                        ttttGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCa                                                                                  >  2:921778/1‑143 (MQ=255)
                                                          ttGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAg                                                                                >  1:1162519/1‑143 (MQ=255)
                                                          ttGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAg                                                                                >  2:1147590/1‑143 (MQ=255)
                                                             ccGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAgcgc                                                                             <  1:680629/143‑1 (MQ=255)
                                                              cGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATGCCTGCAAgcggt                                                                            >  2:1064939/1‑141 (MQ=255)
                                                               ggATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTg                                                                           <  1:430952/143‑1 (MQ=255)
                                                                      gcgTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTcggc                                                                    >  1:180345/1‑143 (MQ=255)
                                                                      ccgTGCACGCCGTATCCGTCCTACATGTTCCTGCTATTTTAATACTTTGCGAGATATCCTGTAGGAGTAACGGGCGGAGCGCCCCCGGCAATTTGTCTTATTGAGATACGTTCTGCAAAAATTCCTGCAAGCGCTGGCTcggc                                                                    <  2:173021/142‑1 (MQ=255)
                                                                         tGAACGCCTTCTCCGTCCCACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTCGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCggg                                                                 <  1:619857/143‑1 (MQ=255)
                                                                         tGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCggg                                                                 <  1:206320/143‑1 (MQ=255)
                                                                           aaCGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGtt                                                               >  1:860215/1‑143 (MQ=255)
                                                                            aCGCCTTATCCGTCCTACAAGTTCATGCAATTTGAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTc                                                              <  1:222900/143‑1 (MQ=255)
                                                                            aCGCCTGATCCGTCCCACTAGGTCATGCAACTCTAATCAGTCGCCAGCTATCCTGTCGGGCTGGTCAGCGGTCTGCAGCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCGCGGCGGGTTc                                                              <  2:787395/143‑1 (MQ=255)
                                                                              gcgttATCCGGCCTACAATTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCtt                                                            <  1:1071311/140‑1 (MQ=255)
                                                                                cTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGCTATCCTGTAGGCCTGATCAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCCAAAATTCCTGCAAGCGCTGGCTCGGCGGGCTCCTGa                                                          >  2:808044/1‑143 (MQ=39)
                                                                                cTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAACAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGa                                                          >  1:119074/1‑143 (MQ=255)
                                                                                cTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGa                                                          <  1:88557/143‑1 (MQ=255)
                                                                                cTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGa                                                          <  1:1296868/143‑1 (MQ=255)
                                                                                 ttATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGAt                                                         <  1:834609/143‑1 (MQ=255)
                                                                                 ttATCCGTCCTACAAGTTCATGCAATTGTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGAt                                                         <  2:617082/143‑1 (MQ=255)
                                                                                   aTCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCa                                                       <  1:841936/143‑1 (MQ=255)
                                                                                    tcggTCATACAAGTTCATGGAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGAGAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCaa                                                      <  2:551729/140‑1 (MQ=255)
                                                                                     ccGTCCTACAAGTTCATGCAATTGTAATAAGTTGCCCGATATCAGGTAGGCCTGAGAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAac                                                     <  1:987616/143‑1 (MQ=255)
                                                                                      cGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAaca                                                    >  1:632061/1‑143 (MQ=255)
                                                                                        tCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACAcc                                                  >  1:976868/1‑143 (MQ=255)
                                                                                         ccTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCt                                                 <  1:918747/143‑1 (MQ=255)
                                                                                             cAAGTTCAGGCAATGTTAAGAAGTGGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCgg                                             <  1:617865/143‑1 (MQ=255)
                                                                                              aaGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGa                                            <  2:1074652/143‑1 (MQ=255)
                                                                                               aGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGAt                                           <  1:182115/143‑1 (MQ=255)
                                                                                                gTTCATGCAATTTTAGTAAGTTGCCAGATATACTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTTCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGAtt                                          <  2:289511/143‑1 (MQ=255)
                                                                                                gTTCATGCAAGTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTGTCTTATTAAGAGACGTGCTGCAATAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGttt                                          <  2:1386158/143‑1 (MQ=255)
                                                                                                    aTGCAATTTTAATAAGTTGCGAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCa                                      <  1:760498/143‑1 (MQ=255)
                                                                                                    aTGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCa                                      >  1:856482/1‑143 (MQ=255)
                                                                                                                     tggcAGAGATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCCGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGcc                     <  2:1000780/140‑1 (MQ=255)
                                                                                                                     tGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCCATGTGTATTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATTAACCGCTGCGGATTGCCATCTTCATCAATCCGTcc                     >  2:100633/1‑143 (MQ=38)
                                                                                                                      gCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGGTTGCCATCTTCCGCAATCCGGCCt                    >  1:695515/1‑143 (MQ=255)
                                                                                                                         aGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATGCGGCCCTTg                 >  2:887820/1‑143 (MQ=255)
                                                                                                                         aGATACCCTGTAGGCCTGATAGGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAATATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTg                 <  2:1302145/143‑1 (MQ=255)
                                                                                                                          gATATCCTGTCGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGt                <  1:923188/143‑1 (MQ=255)
                                                                                                                          agtatCCTCTAGGCCTGATAAGCGTAGCGCATCAGGCACTGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTGGGCGGGTTCTTGATCAGCGCCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGt                <  2:626747/141‑1 (MQ=255)
                                                                                                                            tatCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCg              >  2:166749/1‑143 (MQ=255)
                                                                                                                             atCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGa             >  2:992955/1‑143 (MQ=255)
                                                                                                                             atCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGa             <  1:693736/143‑1 (MQ=255)
                                                                                                                             atCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGa             <  2:1275754/143‑1 (MQ=255)
                                                                                                                                 tGTAGGCCTGATAGGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAGAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCGGCGAATTGCCATCTTCCGCAATCCGGCCTTTGTCGATaaa         <  2:711958/143‑1 (MQ=255)
                                                                                                                                 tGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCCGCGGATTGCCAGCTTCCGGCATCCGGCCTTTGTCGAGaaa         >  2:398536/1‑143 (MQ=39)
                                                                                                                                  gTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAg        <  2:1162884/143‑1 (MQ=255)
                                                                                                                                    agcccTGATAAGCGTAGCGCATCAGGCAATGCGTCTTATTAAGAGACGTGCTGCAAAAATGCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGAt      <  1:15864/140‑1 (MQ=255)
                                                                                                                                    aGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACCCCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGAt      <  1:1068948/143‑1 (MQ=255)
                                                                                                                                     ggCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATc     <  1:592041/143‑1 (MQ=255)
                                                                                                                                      gCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTCTTACGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGACGGGTTATTGATCAACACCTGCTGATTGCCATCTTCCGCAATCCGGCCTTTGTGGATAAAGAtga    >  1:465577/1‑141 (MQ=255)
                                                                                                                                      gCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCa    >  1:53019/1‑143 (MQ=255)
                                                                                                                                      gCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCa    <  1:1138661/143‑1 (MQ=255)
                                                                                                                                      gCCTGACAAGCGTCGCCCATGAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAACATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCa    <  2:1375163/143‑1 (MQ=255)
                                                                                                                                        cTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACCCCTGCGGATTGCCACCTTCCGCAATCCGGCCTTCGTCGATCAAGCTCAGc  >  2:722842/1‑143 (MQ=255)
                                                                                                                                            |                                                                                                                                          
TTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGC  >  NC_000913/845571‑845849

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.