New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1207805	66 (0.810)	12 (0.170)	11/252	7.0	15.2%	coding (305/630 nt)	stfP	e14 prophage; uncharacterized protein
	?	NC_000913	= 1209602	75 (1.040)					pseudogene (18/501 nt)	stfE	pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGA  >  NC_000913/1207664‑1207947                                                                                                                                              |                                                                                                                                               gTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCACGAATCCGTTTGGCGATAACAAATCGGATGGCACTGTGCAAGCGGCCGTCGAAAACGTGGGGTTGGGAGAAGGa                                                                                                                                               >  2:885659/1‑143 (MQ=17)    ccAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAgggctct                                                                                                                                            >  1:663970/1‑139 (MQ=255)           cgagaAGGTGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCa                                                                                                                                     <  1:722516/142‑1 (MQ=255)            gagaAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                                    <  2:111615/143‑1 (MQ=255)              gaAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATg                                                                                                                                  <  1:955315/143‑1 (MQ=255)              gaAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACGCAATg                                                                                                                                  >  2:359272/1‑143 (MQ=255)               aaGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAGTgc                                                                                                                                 >  2:77994/1‑143 (MQ=255)               aaGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                                                                                                 >  1:1219943/1‑143 (MQ=255)               aaGGGCCGGCACGACCAGTTCCTTACCGCACTTCGCGCGCTGCTGCTAAGCCGCAAGAATCCGTTTGGCGATATCAAAGCGGATGGCACTGTGCAAACGGTTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                                                                                                 <  1:914188/143‑1 (MQ=18)                    gcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAGACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCaa                                                                                                                            >  1:433/1‑143 (MQ=255)                      ggcACGTCCAGTTACTTACCGCGCTTCGCGCGCTCATGTTATGCCGCAAGAATCCGTTTGGCGATATCCAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACg                                                                                                                          <  2:1403876/143‑1 (MQ=21)                         aggACCAGTTACTTATCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCt                                                                                                                       <  2:416649/141‑1 (MQ=255)                          cGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCCACGGCTa                                                                                                                      >  2:1365908/1‑143 (MQ=255)                           taCCATTTACTTACCGCACTTCCCGCGCTGCCGTTACGCCGCAAGAATCCGTTTGGCGATATCAAATCAGTTGTCACGGCGCAACCGGCCCTCTAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTAc                                                                                                                     <  2:172834/142‑1 (MQ=21)                           gACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTCTGGGAGAAGGAGCAAAACCCAATGCAGCAACGGCTAc                                                                                                                     >  2:1161751/1‑143 (MQ=255)                                gtgactgacCGCACTGCGCGCGCTGCTGTTAAGCCGCAAGAGTCCGTTTGGCGATATCCACGCGGCTGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCACCGGCTACATTAg                                                                                                                <  2:479843/140‑1 (MQ=21)                                  tacttacCGCACTTCGCGCGCGGCGGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGa                                                                                                              <  2:1082298/143‑1 (MQ=255)                                      tacCGCACCTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCa                                                                                                          <  1:675100/143‑1 (MQ=255)                                       acCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGGCCTTAACTCAATGCAGCAACGGCTACATTAGGACGCAc                                                                                                         >  1:1123067/1‑143 (MQ=255)                                         cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGCGAAGGAGCAAAACTCAATGCAGCAACGGCTACAGTAGGACGCAACg                                                                                                       >  2:963955/1‑143 (MQ=255)                                             cTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGttt                                                                                                   <  2:816754/143‑1 (MQ=255)                                              ttCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCCGCAACGGCTACATTAGGACGCACCGGcttt                                                                                                  >  2:1001426/1‑142 (MQ=255)                                              ttCGCGCGCTGCGTTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                                                                                  <  1:187395/143‑1 (MQ=255)                                              tgcgcgcgCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                                                                                  <  1:888157/141‑1 (MQ=255)                                                cgcgcgCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCACACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCCGCCACGGCTCCAGTGGGGCGCACCGGCTTCAt                                                                                                >  2:331430/1‑143 (MQ=18)                                                 gcgcgcTGCTGTGAGGCCGCAAGAGTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCCCCCGGCTGTCAAAAACCACAGTTTATATATAATAGCAATTCTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                                                                                               <  1:673294/143‑1 (MQ=16)                                                  cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCCGCAACGGCGACATTAGGACGCACCGGTTTCAtcg                                                                                              >  1:1445835/1‑141 (MQ=255)                                                  cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                                                                              <  1:1248617/143‑1 (MQ=255)                                                        gctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCCACGGCTACATTAGGACGCACCGGCTTCATAGCTGTAc                                                                                        >  2:743460/1‑143 (MQ=255)                                                           gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGCAAACCTTGGTTTGGGAGCAGGAGCAAAACTCAATGCAGCACCCGCCACATTAGGACGCACCGGTTCAATAGCTACACCgg                                                                                     >  2:214391/1‑143 (MQ=25)                                                           gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTGGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACCATAAGACTCACCGGTTTCATAGCTATACCgg                                                                                     >  2:569149/1‑143 (MQ=25)                                                                 ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGGTTCATAGCTATACCGCTTATgg                                                                               >  1:1274852/1‑142 (MQ=255)                                                                   gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCCATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGGtt                                                                             >  2:142477/1‑143 (MQ=255)                                                                           ccGTTTGGCGAGATCAAAGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAt                                                                     <  1:1021778/143‑1 (MQ=255)                                                                              cttGGCGATATCAACTCGGATTGCACTGTGCAAACTGCTCTCGCAATCCGTGGTTTGGGAGAAGGAGCAGAACTCTATGCAGCAACGGTTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                                  <  2:424727/142‑1 (MQ=255)                                                                               tgggCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg                                                                 <  2:134967/141‑1 (MQ=255)                                                                                 ggagttatTAAATTGGATAGCACTGTTAAAAATATTTTTGAAAATCTTTATTTAGGAGAAGGAGTAAAAATTAATGTAGTAATTGCTATATTAGTATGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCa                                                               <  2:225346/138‑1 (MQ=255)                                                                                   cGATATCACATCGGATGGCAGTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt                                                             <  2:939907/143‑1 (MQ=255)                                                                                   cGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGGTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt                                                             <  1:161274/143‑1 (MQ=255)                                                                                     gtatCAAATCGGGTGGCACTGTGCAAACGGTTCTCCAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGTAGCAACGGCTACATTAGGACGCCCCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCa                                                           <  2:477194/142‑1 (MQ=39)                                                                                      tatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAg                                                          <  2:775792/143‑1 (MQ=255)                                                                                      tatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTCGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAg                                                          <  1:1310798/143‑1 (MQ=255)                                                                                           aaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGCCGGTGCAAAACTCAATGCAGCAAAGACTACATAAGGACGCACAGGTTACATAGCTATACCGGTTATGATTGATGGTATTGAGAAATAAGTAAta                                                     >  1:110326/1‑142 (MQ=37)                                                                                           aaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATc                                                     >  1:1107790/1‑143 (MQ=255)                                                                                            aTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCa                                                    >  1:1418205/1‑143 (MQ=255)                                                                                            aTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCa                                                    <  2:1303265/143‑1 (MQ=255)                                                                                             tCGGATGGCACTGGGCAAACGGCTGTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTcatcat                                                   <  2:322981/143‑1 (MQ=255)                                                                                                      aCTGTGCAAACGGCTCTCGAAACCCTTGGTTTGGGAGAAGGGGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgggg                                          <  2:389276/143‑1 (MQ=255)                                                                                                            ccaaCGGCTCTCGAAAACCTTGGTTAGTAGGTTGTTTCTAAACTCAATGCAGCACCGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGaa                                    <  1:978968/141‑1 (MQ=255)                                                                                                             aaaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGCGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAAt                                   >  1:1135106/1‑143 (MQ=255)                                                                                                               aCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCATAGTGTAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGc                                 >  2:1033487/1‑143 (MQ=255)                                                                                                                cGGCTCTCGAAAACCTTGGTTTGGGAGCAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc                                <  2:330659/143‑1 (MQ=255)                                                                                                                 ggCTCTCGAACGCCGTGGTTTGGGGGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGGTTCATAGCGATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCg                               <  2:1375720/143‑1 (MQ=255)                                                                                                                    tctcGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCGGTGAGGCTGGCATGCCGCaa                            >  2:687203/1‑143 (MQ=255)                                                                                                                    tctcGAAAACCAAGGGTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTACTGAGCAATCAGTAATCATTCAGTAGGGGCGGAATGCCGcca                            >  2:1420459/1‑141 (MQ=255)                                                                                                                      tcGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaaa                          >  1:1354976/1‑143 (MQ=255)                                                                                                                      tcGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaaa                          >  2:1123295/1‑143 (MQ=255)                                                                                                                        gAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGCCGCACCGGTTTCATAGCTATACCGGTTATGACTGGTGGTATTGAGCAATCCGTAATCATTCGGTGGGGGTGGAATGCCGCGAAAGc                        >  1:193579/1‑143 (MQ=255)                                                                                                                        gAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGc                        >  2:383037/1‑143 (MQ=255)                                                                                                                                     tGGGACAAGGAGCAAAACTCCATGCAGCAACGGCTACAGTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggg           <  2:1190125/143‑1 (MQ=255)                                                                                                                                      gggAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCCCCgggc          >  2:888053/1‑142 (MQ=255)                                                                                                                                       ggAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGACATGATCGGTGGTATTGAGCAATCAGTGATCATTCAGTGGGGGTGGAATGCCGCAAAAGCAACTGCCACTggggg         >  2:188573/1‑143 (MQ=255)                                                                                                                                        gagaAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGGTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGCGGAATGCCGCAAAAGCCTCTGCTTCTgtgggg        >  1:839135/1‑143 (MQ=255)                                                                                                                                           agtgAGCAAAACTCAATGCAGCAGCGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGAt     <  2:888902/140‑1 (MQ=255)                                                                                                                                            aGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATg    >  1:1316767/1‑143 (MQ=255)                                                                                                                                             ggAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATgg   <  1:383037/143‑1 (MQ=255)                                                                                                                                              gAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGa  >  1:1191852/1‑143 (MQ=255)                                                                                                                                              |                                                                                                                                               GTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGA  >  NC_000913/1207664‑1207947

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.