| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,065,745 | A→G | 12.5% | E54G (GAG→GGG) | agp → | glucose‑1‑phosphatase/inositol phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,065,745 | 0 | A | G | 12.5% | 194.6 / 3.6 | 76 | E54G (GAG→GGG) | agp | glucose‑1‑phosphatase/inositol phosphatase |
| Reads supporting (aligned to +/- strand): ref base A (33/30); new base G (9/2); total (43/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTTGCGAACCTGTTCCCGGAAAAAAGTCATATTTCTGTCACACTCTTTAGTGATTGATAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGA > NC_000913/1065508‑1065982 | tttGCGAACCTGTTCCCGGAAAAAAGTCATATTTCTGTCACACTCTTTAGTGATTGATAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATC‑GCCGCAGCTGTGGCAGGGATAGGTTTAC‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGGGCTCATGATGAGCCGCCATAACTTACGCGCGCCGCCGGCGGACAATGGCCGGGGGCTGGAg > 1:258269/1‑239 (MQ=255) tGTTCCCGGAAAAAAGTCATATTTCTGTCACACTCTTTAGTGATTGATAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCCCTGGCGAAAAAAGGCAGGGTGCTGGGGCA‑GTCGACg > 1:132164/1‑238 (MQ=255) taattcttttttctttcACCCTTTTTTGTGATTAAT‑ACAAAAAGGGGGCCCAGAAAACACCAAACCCTAAACGGCCCGAGCTGTGGCAGGGATAGTTTAAC‑TCCTTTCAAACCCACATGCAAAAACCGTACCGGAAGGCTATCAGCTAAGGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGc < 2:267868/230‑1 (MQ=255) gTCACACTCTTTAGTGATTGATAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCCGGCGGAAAATGGCCGTGGGATGGGGCA‑GGCGACGCCGAATAAATGGCCAGAATGGGACGt > 1:510879/1‑238 (MQ=255) tttAGTGATTGATAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGgggg > 1:80436/1‑238 (MQ=255) ggttgaaAAAAAAAGGGGTGCCAGGAAGAAAAAAACCGCTAACC‑GCCGCACGTGGGGCAGGG‑TAGTTTTACGCCGCGTAAACAGACCAGGCCAAAACCTCACCGAAGGGCAACCGGCACAAGCATGTCCTCAGGAGGGGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTc < 2:246822/237‑1 (MQ=255) ttgatAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGGGGGCTGGAGCA‑GTCGCCGCCGAATAAATGGCCCAAATGGGACGGCCCCGGTGGGCacatcc > 1:246822/1‑233 (MQ=255) ttgatAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCCGGCGAACAATGGCAGTGTGCTGGGGCA‑GTCGACCCCGAAAAAAAGGCCAAAAAGGGACGGTCCCGGGGGGCaaacccc > 2:918785/1‑234 (MQ=255) gatAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCCGAATGGGa > 1:119398/1‑216 (MQ=255) gatAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTcacc > 1:9118/1‑238 (MQ=255) gatAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAA‑TCGCTTCAAACGGTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCCTAACTTACGTGCGCCGCCGGCGAACAAAGGCAAGGTGCGGGGGCA‑GTCGACCCCGAAAAAATGGGCAGAAAGGGGAAGCCCCGGGGGGGAACCcaca > 2:982017/1‑237 (MQ=255) aaGAGGTGCCAGGAATGAACAAAACGCTAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGCCCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCCCTGTCGAACAATGGCAGTGGGCTGGGGCA‑GTCGCAGCCGAGAAAATGGCCAGAATGGGGCGTCCCCGGTGGGGGACCCACCACCaaaaag > 2:1038450/1‑236 (MQ=255) ggcccAGGAATGAAAAAAACCATAACC‑GCCGCAGGTGGGGCAGGGATAGTTTTAC‑CCGCTTCAAACGCTCAGGCAAAAACCGTCCCGGAAGGCTAGCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCg < 1:602368/235‑1 (MQ=255) gTGCCAGGAATGAACAAAACGCTAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTTTCAGCCACCACAAGTGCTCATGATGAGCCGCCATAACTTACGGGCGCCGCTGGCGAACAATGGCAGTGTGCTGGGGCA‑GGCCACGCCCAACAAAATGCCCAAATGGGACGGCCCCGGGGGGGAAATCACCCCCCAAAGGGGCGt > 2:978658/1‑239 (MQ=255) gTGCCAGGAATGAACAAAACGCTAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGGGGGCTGGGGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGGGGGCAACTCACCACCAAAGGGGGCg > 1:355334/1‑238 (MQ=255) ccAGAAATAAACAAACCGATAACC‑CCCGCAGGTGTGGCAGGGATATTTTTAC‑TCGTTTCAAACGCTCGGGTACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCt < 1:283744/239‑1 (MQ=255) aGGAATGAACAAAACGCTAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGCATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCCCCACCAAAGGTGGCGTGCTCg > 1:1002912/1‑239 (MQ=255) gAATGAACAAAACGCTACTC‑GCCGCAGCTGTGGCAGGGGTAGTTTTAC‑TCGCTTCCCACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCAGAAATTACGGACCCCCCCGGCGGACAATGGCGTGGCGCTGG‑GCACATCGACCCCCAATAAAAGGCCAGCATGGGGGGAGCCCAGGGTGCAACACAACACCCAAGgcggcgacgtagaa > 2:239240/1‑231 (MQ=255) aaggAACAAAACCGTAACC‑GCCGCGTGTGTGGCAGGGATATTTTTCC‑TCGTCTAAAACGCTAAGGCACAAACCGTCCGGGAAGGCTAACAGCTAACGCAAGGGCTAAGGATGAGCCGCCAGAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGa‑a < 2:80436/235‑1 (MQ=255) aagaaaCAAACCGCTAAGC‑GCCGCAGCTGGGGCAGGGATAGTTTTAC‑TCGCTTCAAACGCCCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGa‑a < 1:836742/234‑1 (MQ=255) aacaaaCAAACCGCTAACC‑GCCGCAGTTGTGGCAGGGATATTTTTCC‑TCGCTCAAACCGCTCAGACACAACCCGAACCGGAAGGCTTTCAGCTACAGAAGGTGCTCAGGAGGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCg < 2:247400/232‑1 (MQ=255) aaagAACAAAACGCTAAAC‑ACCTCAGCTGTGGCAGGGAAAGTTTTAC‑TCGCTTCAAACCCCAGGGCAAAAACCGTTCCGGAAGTCTATCAGCTACGGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGa‑a < 1:388736/235‑1 (MQ=255) aaTGAACAAACCCTAAACC‑CCCGCAGTTGTGGCAGGGATAGTTTTCC‑CCGCTTCAAACCCTCAGGCAAAAACCGTACCGGAAGGCTATAAGCTAAAGCAAGTGCTAATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCg < 1:982017/236‑1 (MQ=255) aaTGAACAAAACGCTAACC‑GCCGCAGCTGTGGCAGTGATAGTTTTAC‑GCGGTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGAAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCg < 1:872143/236‑1 (MQ=255) aaTGAACAAAACGCTAACC‑CCCGCGGCTGGGGCAGGGATAGTTTTAC‑TCCCTACAACCGCTCAGGCACAACCCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGCGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGa < 1:112799/237‑1 (MQ=255) aaCAAAACGCTAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGCTCCGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGta > 1:960229/1‑239 (MQ=255) aCAAAACGCTAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCCAAAGTGGCGGGCTCGA‑AGTGgat > 1:247400/1‑239 (MQ=255) cAAACCGCTAATC‑GCCGCAGCTGGGGCAGGGATAGTTTTAC‑TCGCTTCAACGTCCAAGGCACAAACCGTCCCGGAAGGCTACCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGtata < 1:1038450/239‑1 (MQ=255) aaCGCTAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGGGTatattg > 1:652399/1‑237 (MQ=255) aTC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGGGGCGTGCTCGA‑AGGGTATATGGGCCCTTa > 1:422052/1‑239 (MQ=255) cgcAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGGGCA‑GTCGACGCCGAATAAATGGCCAGAACGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGGGCTCGA‑AGGGGATATTGGGCATTACACGc > 1:552579/1‑239 (MQ=255) gCAGGGATAGTTTTAC‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGGGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGGGAAtg > 1:1035588/1‑236 (MQ=255) ttttAC‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGGGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAg > 1:1016643/1‑239 (MQ=255) ttttAC‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATAAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGGGCA‑GTCGACGCCGAATAAATGGCCCAAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGGGGCGGGCTCGA‑AGGGGATATGGGGAATTACAAGCGGGAATGGCTGGCAgaggag > 2:417109/1‑239 (MQ=255) c‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGGGAATGCCTGGCCGAGCAGGGGAt > 1:702428/1‑239 (MQ=255) cAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACCTGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGa > 1:732873/1‑239 (MQ=255) aCCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTggg > 2:378008/1‑138 (MQ=255) aCCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTggg < 1:378008/138‑1 (MQ=255) cGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGGGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCccgccg > 1:1072806/1‑238 (MQ=255) tACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGTACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGAATCTGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGGGAAACCgggg > 1:75980/1‑224 (MQ=255) tACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACg < 1:1042031/98‑1 (MQ=255) tACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACg > 2:1042031/1‑98 (MQ=255) tACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCccgccgccg > 1:919673/1‑239 (MQ=255) tACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGAGGGTGAAATCGGGGGAATGCccgccgccg > 1:1084594/1‑239 (MQ=255) tACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGGGAATGGCTGGCAGAGCAGGGGATGGGGAAATCGGGGGAATGCccgccgccg > 1:770338/1‑239 (MQ=255) gggatggatcgcAGCTACATGAAGCACTCATGGAGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGGGTGCTGGAGCA‑GGCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCTCCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTac < 1:581815/228‑1 (MQ=255) ggCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGGATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGGACACCGt > 1:498220/1‑239 (MQ=255) aTCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGAGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGCTGGCGTGCTCGA‑AGTGTATATGGGCCCTTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGGGAAATCGGGGGAATGCCCGCCGCCCTACACCGTTta > 1:315552/1‑238 (MQ=255) tCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGGAGTCCCCGGTGGGCAACTCACCACCAAAGGGGCCGTGCCTGAGGGTGT‑TTTGGGCCATTAAAGCCGGGAATGGCTGGCACAGCAGGGGGAGGGGAAAACGGGGGAATGCCCCGCCCCGGACACCGTTtat > 2:545856/1‑238 (MQ=255) tCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGTCCGCCCCCGTAAACCGTTtat > 1:523868/1‑238 (MQ=255) tACAGCAAGTTCTAGTGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTtatgcc < 1:580403/236‑1 (MQ=255) cAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGGGCTCGA‑AGTGCATATGGGCCATTACATGCGCGAATGGCTGGCAGGGCAGGGGGTGGGGAAATCGGGGGAAGGGCCGCCGCCGGACACCGTTattgccctgcc > 2:261390/1‑234 (MQ=255) aGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTatat > 1:631462/1‑151 (MQ=255) aGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTatat < 2:631462/151‑1 (MQ=255) aggTGCTCATGAGGGGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCa < 1:164742/235‑1 (MQ=255) ctaatggtgGGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTc < 1:978658/235‑1 (MQ=255) taagggacgggccATAACTTCCGGGCGCCGCTGGGGAACAAGGGCGGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCa < 2:402259/229‑1 (MQ=255) tcggggcgcCGCTGGGGAAAAATGGCAGTGGGCTGGGCCA‑GTGGACGCCGAATAAAGGGCCAGAATGGGACGTCCAGGGTGGGCACCCCCCCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGca < 2:844225/234‑1 (MQ=255) tACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGca < 1:379714/239‑1 (MQ=255) tACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGca < 1:526871/239‑1 (MQ=255) gcGTGCGCCGTTGGCGAACAGTGGCGGTGGGCTGGAGCA‑GGCGGCGCCGAAAAAAGGCCCAGAAGGGGACGTCCCCGGTGGGCAACCCACCACCAAAGGTGGCGTGCTGGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGca < 2:498220/237‑1 (MQ=255) cGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGtt > 1:402259/1‑228 (MQ=255) cGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGGGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGCCTGCAACGTACCGTTGCGGCCGccca > 1:573835/1‑239 (MQ=255) cgccgcTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAAAAGTCTGCAACGAACCGTTGCGACCGCCCAGt > 1:158253/1‑237 (MQ=255) cgccgcTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTAAACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCCCACAGt > 1:922252/1‑237 (MQ=255) cgccgcTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGACAAGGGGATGGTGAAATCGGGGGACTGCCCGCCGCCGTACCCCGCTTATGCCTATGCCAATAGTCCGCAACGCACCGTTGCCACCCCACAAttt > 2:696019/1‑238 (MQ=255) cAATGGCAGTGTGTGTGAGCA‑GTCGAGGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGgcg < 1:359181/239‑1 (MQ=255) cAATGGCAGTGTGCTGGGGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGgcg < 1:417109/239‑1 (MQ=255) tgtgCTGGAGCG‑GTCGACGCCGAAAAAATGGCCAGAATGGGACGCCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑GGTGTAAATGGGCCCTTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCg < 2:158253/238‑1 (MQ=255) gtgggggAGCA‑GGCGCCGCCGAATAAAGGGCCGGAATGGGACGTCCCCGGGGGGCAACTCCCCACCAAAGGGGGCGTGCTCGA‑AGTGTATATGGGCCATTACAGGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCggg < 2:592954/234‑1 (MQ=255) gtgCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCccg < 2:415679/153‑1 (MQ=255) gtgCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCccg > 1:415679/1‑153 (MQ=255) ggCTGGAGGG‑GTCGACGCCAAATAAAGGGCCAGAAGGGGACGTCCCCGGGGGGCACACCCCCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTCCATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCgggg < 2:1035588/238‑1 (MQ=255) ggCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCgggg < 1:173940/238‑1 (MQ=255) gcgggAGCA‑GGCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCgggg < 1:696019/235‑1 (MQ=255) cTGGCGCA‑GTCCACCCCGAATAAAGGGCCAGAAGGGTGCGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGgtg < 2:1003608/239‑1 (MQ=255) aGCA‑GTCGACGCCGAAGAAATGGGCAGAATGGGGCGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGGGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGa < 1:517484/238‑1 (MQ=255) | TTTGCGAACCTGTTCCCGGAAAAAAGTCATATTTCTGTCACACTCTTTAGTGATTGATAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATC‑GCCGCAGCTGTGGCAGGGATAGTTTTAC‑TCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCA‑GTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGA‑AGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGA > NC_000913/1065508‑1065982 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |