| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,978,166 | T→A | 21.0% | Y245F (TAT→TTT) | lysA ← | diaminopimelate decarboxylase, PLP‑binding |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,978,166 | 0 | T | A | 21.0% | 88.6 / 4.9 | 46 | Y245F (TAT→TTT) | lysA | diaminopimelate decarboxylase, PLP‑binding |
| Reads supporting (aligned to +/- strand): ref base T (19/16); new base A (2/8); total (21/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.76e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCAGCTGCCAGGGCACTGATATGGTGGTAACTACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGG‑CTCCCCATTTGTTTGACGCTCCG‑CACCTGAGTAATTAATACGCCAGACTGCGCTACCA‑GGA‑AGCGACCCGGTTCAATTT‑CCAGTTTCACAGGGTGGCCCAAA‑T‑GGCGGGCGATTTGCTCACGCGCGGC‑ATTCCACAGA‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCACGTCCAGTGCGGCGGGCAGATCGGTGTACC > NC_000913/2977932‑2978400 | tCAGCTGCCAGGGCACTGATATGGTGGTAACTACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGG‑CTCCCCATTTGTTTGACGCTCCG‑CACCTGAGTAATTAATACGCCAGACTGCGCTACCA‑GGA‑AGCGACCCGGTTCAATTT‑CCAGTTTCACAGGGTGGCCCAAA‑T‑GGCGGGCGATTTGCTCACGCGCGGC‑ATTCCACAGA‑CCataata < 1:739386/239‑1 (MQ=255) cTGCCAGGGCACTGATATGGTGGTAACTACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGG‑CTCCCCATTTGTTTGACGCTCCG‑CACCTGAGTAATTAATAAGCCAGACTGCGCTACCC‑GGG‑AGCGACCCGGTTCAATTT‑CCCGTTTCACAGGGTGGCCCAAA‑A‑AGCGGGAGGATTGTTCACCCCCGGC‑GTTTCACAGA‑CCCtaacaaatt > 1:661931/1‑236 (MQ=255) tGCCAGGGCACTGATATGGTGGTAACTACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGG‑CTCCCCATTTGTTTGACGCTCCG‑CACCTGAGTAATTAATACGCCAGACTGCGCTACCA‑GGA‑AGCGACCCGGTTCAATTT‑CCAGTTTCACAGGGTGGCCCAAA‑T‑GGCGGGCGATTTGCTCACGCGCGGC‑ATTCCACAGA‑CCATAATAATGtt < 1:179834/239‑1 (MQ=255) cAGGGCACTGATATGGTGGTAACTACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGG‑CTCCCCATTTGTTTGACGCTCCG‑CACCTGAGTAATTAATACGCCAGACTGCGCTACCA‑GGA‑AGCGACCCGGTTCAATTT‑CCAGTTTCACAGGGTGGCCCAAA‑T‑GGCGGGCGATTTGCTCACGCGCGGC‑ATTCCACAGA‑CCATAATAATGTTCgg < 1:1011610/239‑1 (MQ=255) ttatgtggtgtTACCTCCCGTTCTTTGCGGGGCGCATCAGATTTTGGAACCCGGCATAACCCAGAACAAAGGGGGGG‑CCCCCCATTTGTTTGACGCTCCG‑CACCTGAGTAATTAATACGCCAGACTGGGCTACCA‑GGA‑AGCGCCCCGGTTCAATTT‑CCAGTTTCACAGGGGGGCCCAAA‑T‑GGCGGGCGTTTTGCTCCCGCGCGGC‑ATCCCAAAGA‑CCATAATAAGGTGCGGTATCAAcc < 2:376965/234‑1 (MQ=255) gtggtAACTACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGG‑CTCCCCATTTGTTTGACGCTCCG‑CACCTGAGTAATTAATACGCCAGACTGCGCTACCC‑GGA‑AGCGACCCGGTTCAATTT‑CCAGTTTTACAAGGGGGCCCACA‑T‑TGCGGGCGATTTGCTCACCCGCGGC‑CTTTCCCCAA‑CCATAATAATGTTCGGGATCCACccccctt > 1:172804/1‑235 (MQ=255) aaCTACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGG‑CTCCCCATTTGTTTGACGCTCCG‑CACCTGAGTAATTAATACGCCAGACTGCGCTACCA‑GGA‑AGCGACCCGGTTCAATTT‑CCAGTTTCACAGGGTGGCCCAAA‑T‑TGCGGGCGAATTTCTCACCCGCGGC‑ATTCCCCCAA‑CCAACATAATATTCGGGATCCAACCCCTCtttcac > 1:315889/1‑234 (MQ=255) cGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGG‑CTCCCCATTTGTTTGACGCTCCG‑CACCTGAGTAATTAATACGCCAGACTGCGCTACCA‑GGA‑CGCGACCCCGTTCAATTT‑CCAGTTTCACAGGGTGGCCCAAA‑T‑GGCGGGCGATTTTCTCCCCCGCGGC‑CTTTCACAGA‑CCCTAATAATTTTCGGGATCACACGCCCCTTCAccccctttg > 1:187825/1‑233 (MQ=255) tACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGG‑CTCCCCATTTGTTTGACGCTCCG‑CACCTGAGTAATTAATACGCCAGACTGCGCTACCA‑GGA‑AGCGACCCGGTTCAATTT‑CCAGTTTCACAGGGGGGCCCCAA‑T‑GGCGGGCGAGTTTCTCACGCGCGGC‑ATTCCCCAGA‑CCCTAATAAAGTTCGGTGTCAACCCCCCCTTTAcccctttgtat > 1:678883/1‑231 (MQ=255) tGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGG‑CTCCCCATTTGTTTGACGCTCCG‑CACCTGAGTAATTAATACGCCAGACTGCGCTACCA‑GGA‑AGCGACCCGGTTCAATTT‑CCAGTTTCACAGGGTGGCCCAAA‑T‑GGCGGGCGATTTGCTCACGCGCGGC‑ATTCCACAGA‑CCATAATAATGtt < 1:72148/203‑1 (MQ=255) cccGGCACCAACCAGCACAAAGGGGCCG‑CTCCCAATTTGGTGGACCCCCCG‑CACCTGAGTAATTAATACGCCAGACTGCGCTACCA‑GGA‑AGCGACCCGGTTCAATTT‑CCAGTTTCACAGGGTGGCCCAAA‑T‑GGCGGGCGATTTGCTCACGCGCGGC‑ATTCCACAGA‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGaaa < 1:297543/239‑1 (MQ=255) caccgCATCACCCA‑CAAAAAGGGGGGGCCTCCCCTTTTGTTTGAGGCTCGG‑ACACTGATTACTTAACCCGCCAGCCGGCGC‑ACCC‑GGAGAGCGACCGGGTTCATTTC‑CGGGTTTAAAGGGGTGGCCTAAA‑T‑GGCGGGCGTTTTGCCCCCGCGCGGC‑TTCCCACAGA‑CAATAATAATGTTGGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCCCCGCCCGCAGaaa < 2:661931/235‑1 (MQ=255) ggcaccccccAGCCCAAAGTGGC‑G‑CCCCCCATTTTGTTGGCGGCCCGCCACATATGAAATTAAGCCGCCAGTC‑GGGCCACCAGGGA‑AGCGCCCCGTTTAAATTC‑CCAGTTCCCCGGGGGGCCCAAAA‑T‑GGCGGCCGTTTGCCTCCCGCGCGGC‑TTCCCACAGA‑CAATAATAATGTCCGTTACCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAg < 2:644915/231‑1 (MQ=255) ggCATCAACCAGCACAAAGTGGCGG‑CTCCCCATTTGTTTGACGCCACG‑CACCTGAGTAATTAATAAGCCAGACTGCGCTACCA‑GGA‑AGCGACCCGGCTCAATTT‑CCAGTTTTACAGGGGGGCCCCAA‑A‑TGCGGGCGATTTTGCCGCCCGCGGC‑ATTCCCCACA‑CCAAAAAAAAGTTCGGTCTCAACACCCCCTTCACCCCGTTGATAAGAAACAAAAAAACCACCCCCCCCACAAATa > 2:118239/1‑238 (MQ=255) ttttttggccccTCCC‑CCCCGGAGTAATTAATCCGCCGGGCTGCGCTCCCA‑GGA‑AGCGACCCGGTTCAATTC‑CCAGTTTCACAGGGTGGCCAAAA‑T‑GGGGGGCGATTTCCTCCCGCGGGCA‑ATTCCA‑AGACCCAAAATAATGTTCGGTACCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGa < 2:1014075/228‑1 (MQ=255) tttgACGCTCCG‑CACCTGAGTAATTAATACGCCAGACTGCGCTACCA‑GGA‑AGCGACCCGGTTCAATTT‑CCAGTTTCACAGGGTGGCCCAAA‑T‑GGCGGTCGATTTGCTCACCCGCGGC‑ATTCCACAGA‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGc > 1:761320/1‑238 (MQ=255) gccGCTCCG‑CCCCTGAGTAATTAAGCCGCCAGACTGCCCTACCA‑GGA‑AGCGCCCCGGTTCAATTT‑CCGGTTTCACGGGGTGGCCCAAA‑G‑GGCGGGCGATTTGCTCACGCGCGGC‑ATTCCACAGA‑CCATAATAATGTCCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCa < 1:503129/237‑1 (MQ=255) aCGCTCCG‑CACCTGAGTAATTAATACGCCAGACTGCGCTACCA‑GGA‑AGCGACCCGGTTCAATTT‑CCAGTTTCACAGGGTGGCCCAAA‑T‑GGCGGGCGATTTGCTCACGCGCGGC‑ATTCCACAGA‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCCCCAt > 1:1079525/1‑239 (MQ=255) cGCTCCG‑CACCTGAGTAATTAATACGCCAGACTGCGCTACCA‑GGA‑AGCGACCCGGTTCAATTT‑CCAGTTTCACAGGGTGGCCCAAA‑T‑GGCGGGCGATTTGCTCACGCGCGGC‑ATTCCACAGA‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGaaa > 1:93959/1‑195 (MQ=255) caaacgcgtatatttatCCGCCAGCCGGCGCTAGCA‑GGA‑GGCG‑CCCGTGTCAAACT‑CCCCTGTCCCAAGGGGGCCCAAA‑TGGGCGGGCAGTTGGCCCACGC‑CGGCAATTCCCAAGC‑CCAGTATAATGGCCGGGAGCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGcacca < 2:591351/228‑1 (MQ=255) aGTAATTAATACGCCAGACTGCGCTACCA‑GGA‑AGCGACCCGGTTCAATTT‑CCAGTTTCACAGGGTGGCCCAAA‑T‑GGCGGGCGATTTGCTCACGCGCGGC‑ATTCCACAGA‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACcacaca > 1:1093246/1‑236 (MQ=255) aattaacCCCCCAGGCTGCGCTCCCA‑GGG‑AGCG‑CCCGTTTCTAATT‑CCCCGTTCCCAGGGTGGCCCAAAGG‑GGCGGGCGTTTTGCTCCCCGGCGCC‑TTCCCCAAGC‑CCATAAAATTGTCCGGTAACACCCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGtt < 2:231284/239‑1 (MQ=255) aatACGCCAGACTGCGCTACCA‑GGA‑AGCGACCCGGTTCAATTT‑CCAGTTTCACAGGGTGGCCCAAA‑T‑GGCGGGCGATTTGCTCACGCGCGGC‑ATTCCACAGA‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCGTCAATAGCCCGTAAATCCTGACCGAATTCGCCAACCCGACGCACCATAACACAACACACCCCTTCCaa > 2:34279/1‑238 (MQ=255) aatACGCCAGACTGCGCTACCA‑GGA‑AGCGACCCGGTTCAATTT‑CCAGTTTCACAGGGTGGCCCAAA‑T‑GGCGGGCGATTTGCTCACGCGCGGC‑ATTCCACAGA‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAAAAAGCCCACCGCCCGCCGAAACAGCCTGTAAATCCTGACCGAATTCGAGGACCTGAAGCACCAAAACACCACAAACCCGGTCCaa > 2:365347/1‑238 (MQ=255) gCCAGACTGCGCTACCA‑GGA‑AGGGACCCGGTTCAATTT‑CCAGTTTCACAGGGTGGCCCAAA‑T‑GGCGGGCGATTTGCTCACGCGCGGA‑ATTCCACAGA‑CCATAATAATGATCGGCATCAACCTCCTCTTCACCCTGTTGATAAGGAACAAAAAGACCACCCCCCGCAGAAATAGCCGGTAAATCCTGACCGAATTCCACGACCTTAAGCACCATAGCACCACACACCTCGTCCCGAttg > 2:164202/1‑236 (MQ=255) gcgccccccA‑GGA‑GGCGCCCCGGTTAATGTA‑CCAGTTCCCCAGTGTGCACAAAA‑G‑GGCGGGCTCTTTGCCCACGGCCGGC‑ATTCCACAAA‑CAAAAAAAATTTGCGGATCCAACCGCCTCTTCCCCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTTACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATc < 2:761320/232‑1 (MQ=255) ggcttcccgggA‑AGCGGCCCGTTTCAATTT‑CCAGTTTCCAGGGGTTGCCAAAA‑T‑GGCGGGCGATTGTCTCACGCGGGGC‑ATTCCAAAGA‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCa < 1:100210/230‑1 (MQ=255) gCGACCCGGTTCAATTT‑CCAGTTTCAGAGGGTGCCCAAAA‑T‑GGCGGGCGATTTGCTCACGCGGGGC‑ATTCCACAGC‑CCAAAATAATGTTCGGTACCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCa < 1:161912/238‑1 (MQ=255) gccgcgTTTAATTTCCCGGTTGCACAGGGTGCCCAAAA‑T‑GCGGGGCGTTTTGCCCAGGCGGGGC‑ATCCACCAGA‑CCAAAAAAAGGTTGGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAAt < 2:172804/233‑1 (MQ=255) aCCGGGTTCAATTC‑CCATTTTCACAGGGTGGCCCAAA‑G‑GGCGGCCGTTTGGCTCCCGCGCGGC‑ATCCCACAGA‑CCAAAAAAATTTTCGGTACCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAAtgt < 1:1086993/239‑1 (MQ=255) aCCCGGTTCAATTT‑CCAGTTTCACAGGGTGGCCCAAA‑T‑GGCGGGCGATTTGCTCACGCGCGGC‑ATTCCACAGA‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCATACACCTGTTCCAGATGGGCATAAt > 1:660954/1‑221 (MQ=255) gTTCAATTT‑CCAGTTTCACAGGGTGGCCCAAA‑T‑GGCGGGCGATTTGCTCACGCGCGGC‑ATTCCACAGA‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACCACCCATAGCACCACATACCTGTTCCAGATGGGCATAATCAAACCCAAAACCacagcgcagg > 1:1074225/1‑230 (MQ=255) ggggCCAAAA‑T‑GGCGGGCGTTTTGCTCCCCGCCGGC‑ATCCCCAAAA‑CCAAAAAAATGTTCGGTACCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCa < 1:402422/234‑1 (MQ=255) ggCCCAAA‑G‑GGGGGGCGATTGCCACACGGCTGGC‑ATCCCCCAGA‑CCATAATAATGTTCGGTATCAACCGCCTCTTCCCCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAgatga < 1:494481/239‑1 (MQ=255) gCCCAAA‑T‑GGCGGGCGATTTGCTCACGCGCGGC‑ATTCCACAGA‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAgatgat > 1:220610/1‑239 (MQ=255) cccAAA‑T‑GGCGGGCGATTTGCTCACGCGCGGC‑CTTCCACAGA‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTTTAAATCCTGACCGAATTCGCTGACCTGACGCACCATAGCACCCCACCCCTGGTCCAGATGGGCATAATCAACCCCAGAACCAATGAGCATGTGAATGACGACAAGATTCAgatgaaa > 2:256723/1‑237 (MQ=255) caaaa‑G‑GGCGGGTGATTTGCTCCCGCGCGGC‑ATCCCACTGA‑CCATAATAAGGTGCGGTACCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGatgatg < 1:255281/236‑1 (MQ=255) aaa‑G‑GGCGGGCGATTTCCCCCCGCGGGGC‑ATTCCACAGA‑CCAAAATAAGGTTCGGTAACAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACg < 1:293236/239‑1 (MQ=255) a‑T‑GGCGGGCGATTTGCTCACGCGCGGC‑ATTCCACAGA‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGt > 2:358408/1‑118 (MQ=255) a‑T‑GGCGGGCGATTTGCTCACGCGCGGC‑ATTCCACAGA‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGt < 1:358408/118‑1 (MQ=255) a‑T‑GGCGGGCGATTTGCTCACGCGCGGC‑ATTCCACAGA‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGCCGtt > 1:434318/1‑239 (MQ=255) cgcgcgGC‑ATTCCACAGA‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGa < 1:99215/156‑1 (MQ=255) cgcgcgGC‑ATTCCACAGA‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGa > 2:99215/1‑156 (MQ=255) cttatcccaaGA‑CAATAATAATTTTGGGTATCAACCGCCTCTTCCCCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCACGTCCAGTGCGGCGGGCa < 1:520897/229‑1 (MQ=255) cacaGA‑CCATAATAATGTTCGGTATCAACCGCCTATTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCACGTCCAGTGCGGCGGGCAGATCGgt < 1:365347/239‑1 (MQ=255) acagccAAAAAAATGTTCGGTAACAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCACGTCCAGTGCGGCGGGCAGATCGgt < 1:327942/233‑1 (MQ=255) a‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGATCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATCATCAACTCCAGAACCAATGTTCTCATCAATCCCGACCAGATGCAGATAATGACGTTGTATCACGTCCAGAGCGGCGGGCAGATCGgtgtccg > 1:510731/1‑236 (MQ=255) a‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCACCGCCAGATGATAACGTAGAATACCATCCAGTGCGGCGGGCACATCgggggaca > 2:104129/1‑233 (MQ=255) | TCAGCTGCCAGGGCACTGATATGGTGGTAACTACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGG‑CTCCCCATTTGTTTGACGCTCCG‑CACCTGAGTAATTAATACGCCAGACTGCGCTACCA‑GGA‑AGCGACCCGGTTCAATTT‑CCAGTTTCACAGGGTGGCCCAAA‑T‑GGCGGGCGATTTGCTCACGCGCGGC‑ATTCCACAGA‑CCATAATAATGTTCGGTATCAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCACGTCCAGTGCGGCGGGCAGATCGGTGTACC > NC_000913/2977932‑2978400 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |