| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 647,210 | A→C | 21.2% | G100G (GGT→GGG) | citG ← | 2‑(5''‑triphosphoribosyl)‑3'‑dephosphocoenzyme‑A synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 647,210 | 0 | A | C | 21.2% | 100.2 / 2.6 | 54 | G100G (GGT→GGG) | citG | 2‑(5''‑triphosphoribosyl)‑3'‑dephosphocoenzyme‑A synthase |
| Reads supporting (aligned to +/- strand): ref base A (33/7); new base C (2/11); total (35/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.33e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGCCAGCCCAGCAGGG > NC_000913/646974‑647445 | gcaccGGTAAGGCCAAGCGTGTGGTAAAACCGTTGCCCTGCCGGCAGTTGAGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCAc < 1:473790/235‑1 (MQ=255) gCCAAGCTTTTGTAACAACGGTTGACCTGCCGGCAGTTGAGAATTATTGGTACGCAGTGCGCGATCGGTCAGGCCCCGGCAGAACCTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGc < 1:1044731/237‑1 (MQ=255) aaGCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCGG‑CCTTTATGCGTGTTTACGCCCGCAGGGGCC‑CGGAACATATCACCTAAGCAAGCCATAc > 1:355530/1‑239 (MQ=255) tGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTgg > 1:981292/1‑239 (MQ=255) cAACCGTTGACCGGCCGTCCGTTGTGAATTATGGGTACGCAGTGCGCGATCGGTCGGGCCACGGAAAAAATTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTa < 1:92266/239‑1 (MQ=255) aCCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTaa > 1:254609/1‑238 (MQ=255) aCCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGGGTTTACGCCCGCAGGGGCG‑CGGAACAAATCACCTTAGCAAGCCATACCAATTggggggaa > 2:92266/1‑233 (MQ=255) ttGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACCTATCACCTTCGCAAGCCATACCAATTGAGCGTAATCCGt > 1:697287/1‑239 (MQ=255) ttGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACAGATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGt > 1:135384/1‑239 (MQ=255) tGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTg > 1:510444/1‑239 (MQ=255) gACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGCAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAAAATATAACCTTCGCAAGCCATACCCATTGGGGGGAACCCgggg > 2:906368/1‑239 (MQ=255) gACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGGTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑ACTG‑CCTTTATGCGTGTTTACGCCCCCAGTGGCG‑CGGAACATAACACACTCGCAAGCAAAACCAATTAGGGGTAACCCGTgg > 2:652168/1‑239 (MQ=255) gCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATCCCAATTGGGCGTAATCCGTGGAGTa > 1:763137/1‑238 (MQ=255) gCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGGGTTTACGCCCGCAGTGGCG‑AGGAACATATCACCTTCGCAAGCCATCCCAATTGGGCGTAATCCGTGGAGTa > 1:1104119/1‑238 (MQ=255) ccGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATCCCAATTGGGCGTAATCCTTGGGGTAc > 1:275755/1‑238 (MQ=255) aGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCGGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGGGTTTACCCCCCCAGGGGCC‑GGGAACAAATACCCTTCCAAAACCATCCCCATTGGGGGCAATCCGGGGGGAACCCCttt > 2:653964/1‑238 (MQ=255) aGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGGGTTTACGCCCGCAGGGGCG‑CGGAACATATCACCTTCGCCAGCCCAACCAATTGGGTGTAATCCGGGGGGTACCCCTTc > 2:822586/1‑239 (MQ=255) ttGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCAGTGGAGTACCGCTTCTGGG‑GCCAttt > 1:810520/1‑238 (MQ=255) cAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGCGTTGACGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATCCTTGTTTACACCCGCAGCTGCG‑CGGAACCTATCCCCCTCGAACCCCCTACCAATTGGGCGGCAACCGCGCGGAACCCCTCCTTGT‑GCCCTTTccccccacc > 2:406910/1‑232 (MQ=255) ttCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGGGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCACAAGCCATACCAATTGGGCGCAATCCGGGGAGAACCGCTTCCGGG‑CCCATTTCCGCACCACAg > 2:471657/1‑238 (MQ=255) cgcgATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGGTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGAACATAGCAGCCCTAAAGAAAAAAT‑CCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGG‑GCCATTTCCGCAACACAGGc > 1:780224/1‑238 (MQ=255) gcgATCGGCCGGGCCACGGCAAAAACTGGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAACCGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCAc < 1:245528/239‑1 (MQ=255) cGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAAt > 1:913600/1‑239 (MQ=255) gTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGCAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGGTTACGCCCGCAGTGGCG‑CGGACCAACTCACCTTCCCAAGCCATACCAATTGGCCGTAACCCGTGGAGAAACGCTT‑TGGTCGCCATTTCCCCACCCAAGCCACCaaaacc > 2:37140/1‑236 (MQ=255) gTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCC‑CGGAACATATCACCTTCGCAAGCCATACCACTTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCCCACTACAGGCACCAAAtta > 1:568574/1‑238 (MQ=255) cgcggaaaacaCTGGCCGCCGAAAAAAAAACGGTTGTTGGCTTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCGTCCCTAAAAAAAAAAT‑GCTG‑CCTTTAGGCGTGTTTACGCCCGAAGTGGCG‑CGGAAAATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGaa < 2:810520/228‑1 (MQ=255) caggggaaaaaCTGGCCGCCGTAGAACAAACGGTTGTGGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGaa < 1:506450/230‑1 (MQ=255) cGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACg > 1:1079719/1‑239 (MQ=255) acttggccggtgTAGAACAAACGGTTTTTGGCGTTCCCGGTTGGTTGAGTTGAAGCAACCGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTagc < 1:342545/228‑1 (MQ=255) aCGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAACTTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAacg > 1:1016465/1‑238 (MQ=255) tgttgGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCCCCAAATTCACGGAAACGGGCTAGCCAGCCCTGAATCGCCAGCGCGCTGc > 1:776949/1‑239 (MQ=255) tACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCa > 1:610458/1‑181 (MQ=255) ttggtggAGTTGAAGCAAACGGCCAATTGCCCAACATAGCAGCCTTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAAGCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTcc < 1:850596/238‑1 (MQ=255) ttggtggAGTGGAAGCAAGCGGCAAGTTGCCGCCGATAGC‑GCCCCAAAAAAAAAAA‑GGTGCCCTTAATCGGTGTTTCCCCTCGC‑GTGGGGCCGGACCATACCCCCTTCGAAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTcc < 2:296131/238‑1 (MQ=255) gagttgaAGAAAGCGGCCAATTGCCGCACAGAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCGGTGGCG‑CGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCa < 1:822586/239‑1 (MQ=255) aaCGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTCCGCCCGCAGTGGCG‑CGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTgc < 1:1092612/239‑1 (MQ=255) ccGGCCATTTTCCCAACATACCCGCCCTAAAAAAAAAAG‑TCTG‑CCTTTAGGCGTGTTTCCGCCGTGGGTGGCG‑CGGAACATATCGCCCTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCCCCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTgcg < 2:1094671/238‑1 (MQ=255) aCGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAACCGGGGTAGCCAGCCCTGACTCGCCACCCCGCTCCGGGGGAAATCTTCCAGCCCCCTATCTTTGTgc > 2:779877/1‑238 (MQ=255) cGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGGACCGCTTCTGGG‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCGGCGGGGGAAATATTCCAGCGCCATACCTTTGGgcgc > 2:720304/1‑239 (MQ=255) ttGCCCCACATAGCAACCCAAAAGAAAAAAT‑GCTG‑CCTTTAGGCGTGTTTACGCCCGCAGGGGCG‑CGGAACATATCACCTGCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAg < 1:195725/239‑1 (MQ=255) tccaTAGCCACCCTAAAAAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGTAGTGGCG‑CGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATg < 1:264601/237‑1 (MQ=255) tccttcgcgcCCCAAAAAAAAAATGGCTT‑CTTTTAGGGGGTTTTCCGCCCGGAGGGGCG‑CGGAATATCCCCCCTTCTAAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATg < 2:254609/231‑1 (MQ=255) agcagcCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCCGTTAATGCgtc > 1:405598/1‑236 (MQ=255) cagcCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAACCGCCAGCCCGCGCCGGTGGGAATCTTCCAGCGCCAAACCTTTTTGCCAACCCAAGTTAAtcgaaacc > 2:894587/1‑231 (MQ=255) tAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGGGGAAATCTTCCAGCGCCCTATCTTTTGGCCAACCCCAGTTAATGCGATCCCCGCgg > 1:427664/1‑238 (MQ=255) aaGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCatat > 1:998304/1‑201 (MQ=255) aaaaT‑GCTG‑CCTTTATGCGTTTTTACGCCCGCAGTGGCG‑CGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGttt < 1:471657/239‑1 (MQ=255) tttATGCGGGTTTCCGCCCGAGGGGGCG‑CGGAACACTGCCCCCTGCCAAGCCCTACCAATTGGGCGTAACCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGAt < 1:652168/239‑1 (MQ=255) aTGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTg > 1:892991/1‑238 (MQ=255) tttACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACCGATTGACTtcag > 1:1028870/1‑238 (MQ=255) tttACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGCTTGACTtcag > 1:174697/1‑238 (MQ=255) cggaGTGGCA‑CGGCACATCCCCCCGTCGCAAGCCATACCAATTGGGCGTAATCCGTTGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATgg < 1:37140/236‑1 (MQ=255) tatCCCCTCCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCGGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGCCAGCCCAGCAgg < 1:433181/239‑1 (MQ=255) atCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGGAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGGGCCAGCCCCGCAggg > 2:804551/1‑239 (MQ=255) | GCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGCCAGCCCAGCAGGG > NC_000913/646974‑647445 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |