| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,274,349 | T→G | 21.8% | G57G (GGT→GGG) | yejB → | microcin C ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,274,349 | 0 | T | G | 21.8% | 148.8 / 5.5 | 75 | G57G (GGT→GGG) | yejB | microcin C ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base T (14/39); new base G (15/5); total (31/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.18e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TACCTGGTGGTATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGA‑GTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGC > NC_000913/2274115‑2274578 | tACCTGGTGGTAGGACGTCAATAAAGCGGCCAAACTGCCTTCCGCCAGCAAACAGGGAGA‑GTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGtt < 1:1210311/238‑1 (MQ=255) tggtggTATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGA‑GTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGGCGCCATTGAGTTTGGTAATGCCGGGGTATTACCCGGCCCCGCCGGTGGAGGGGTTtgtg > 2:265613/1‑238 (MQ=255) tggtggTATGACGTCAATAAAGCGGCCAAACTACCGTCCGCCAGCAAACAGGGAGA‑GTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGCCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGGGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTg > 1:1276042/1‑238 (MQ=255) ggtATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGA‑GTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCTGg‑ccag > 1:1049429/1‑238 (MQ=255) ccggtcaaaacgCGGCCAAACGGCCGTCCGCCAGAAAACAGGGGCA‑GTAGGTGGGTGCTTACCTGGTTCGCCGTCTGTTGCTGGGGATCCCAACATTGTGGGCGATTATCCCCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATgcg < 2:1071354/228‑1 (MQ=255) gTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGA‑GTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGGGAAGGGGTTCTGG‑CCAGCCATggcca > 1:315683/1‑235 (MQ=255) aaaaaggCGGCCACCCTGCGTCCCGCCAAAAAACAGGGGGA‑TTAGATGGCCGCTTCCCTGTTTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCaaa < 2:73807/232‑1 (MQ=255) aGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGA‑GTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGGGATCCCAACATTATGGGCGGTTATCACCCTCAAATTTTTCATCGTG‑CCAATTGCGCCTGGCGGTCCGGTCGACCAGGCCACCGCCGCCATTTAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGGGAAGGGGTT‑GTGTACAGCCAAGGGCAAACcgggg > 2:438656/1‑237 (MQ=255) ccAAACTGCCGTCCGCCAGCAAACAGTGAGA‑GTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAACTTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGCGTATTACCCGGCGCAGGCGGTGAAAGGGTTCGTG‑CCAGCCACGAGCAAACGGGTGTCGGc > 1:287688/1‑239 (MQ=255) ccAAACTGCCGTCCGCCAGCAAACAGGGAGA‑GTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGGTCCTG‑CCAGCCCAGCGCAAACGCGGGTccgg > 1:1196378/1‑236 (MQ=255) gTCCGCCAGCAAACAGGGAGA‑GTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTTCCCGGCGCAGGCGGTGAAGGGGTTGGTG‑CCCGCCAGGCGCAAACGGGGGTGGGCAAAAACAGCg > 2:114314/1‑239 (MQ=255) cccccccgaaaCAGGGGGGGGTAGTTGGGCCGTTACCGTATTCCCCGTTTGTTCGTGGTGGTCCCAACATTTTGGGCGATTATCCCCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGa < 2:1324729/231‑1 (MQ=255) ccccccagaaaCTGGGGGG‑GTGGGTGGGCGTTTTCCTGTTTCGCCGGTTGTTTATGGTGAACCCAACATTATGGGGGATTTACCCCCACAACTTTTTTATCGTG‑AAAATTGCGCGTGGCGGGCGGGTCGACCCGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGAc < 2:766484/231‑1 (MQ=255) cccccAGCAAAGGGGGGGA‑TTAGGTGGGGCTTTTCCTTATTCCCCGTCTGTTGCTGGGGATCCCAACATTATGGGCGATTATCCCCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGAc < 2:332369/236‑1 (MQ=255) tggtGGGGGTTTCCCTGCTTCGCCTTTTTTTTCGGGTGCCCCCAACTTTATGGGCTATTTGCCCCATCAATTTTTTCATCGTG‑CAAATTGCGCCGGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGAcg < 2:599379/235‑1 (MQ=255) aGATGGGGGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGAcg < 1:1353135/238‑1 (MQ=255) gATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGTTTCGGG‑CCAGCCAACCCCAAACCGGTGTCGGCAAAATACGGGACAGGAAATACCGggggggcggcg > 2:170513/1‑234 (MQ=255) tGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCCTTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGACGGCGTTCGTG‑CCACCCCAGCGCAAACGGGGGTCGGGCATATCAGCGCCCGTAATTACCCTGGCGGACACggg > 2:255463/1‑238 (MQ=255) gggCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGGGAAGGTGGTTGTG‑CCAGGCCTGCGCAAACGGGGGTCGGCCATATCAGCGCGAGGAATTACCGTGGGGGGCgggggt > 2:1162952/1‑237 (MQ=255) gtccTTACCTGATTCGCCTTCTATTGCTGGTTATCCCAACATTATGGGCGATTATCACCATCAACTTGTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGAtt < 1:733349/235‑1 (MQ=255) gcgcTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGAtt < 1:186243/238‑1 (MQ=255) gcgcTTACCTGATTCGCCGTCTGGTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGAtt < 1:750381/238‑1 (MQ=255) cTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGGTGCGGACGCGGATTAGa > 1:1065802/1‑238 (MQ=255) cTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTG‑CCCGCCATGCGCAAACGGGTGTGGGCAAAATCAGCGACAGTAATTACCGTGGCGGagccgggtttga > 1:1110620/1‑227 (MQ=255) cTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGGG‑CCAGCCATGGGCAAACGGGGGTCGGCAATATCAGCGACCGTAATTACCGTGGCGGACCCGGGTTAGa > 1:917526/1‑238 (MQ=255) aCCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGGGTCGGCAAAATCAGCGACAGTAATTACAGTGGCGGACGCGGAGTAGATCCa > 1:1128057/1‑239 (MQ=255) aCCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGCGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGAAATTACCGTGGCGGACCCGGATTAGATCCa > 1:681140/1‑239 (MQ=255) ccGTTTTTTTCTGGTGTTCCCAACATTTGGGGCGTTTATCCCCATCAACTTTTTCACCGGG‑CAAATTGCCCCTGGCGGGCCGGTCGACCGGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCg < 2:1276235/239‑1 (MQ=255) gTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCCTGGCGGACCCGGATTAGAACCCGaaaccggttct > 1:430590/1‑230 (MQ=255) tCTATTGCTTGTGATCCCAACAGTATGGGCGATTATCACCATTAACTTTTTCATCGTG‑CAAATTGCGCCGGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGccg < 1:886108/239‑3 (MQ=255) ttgttacccccACTTTGTGGGCGATTATCACCCTCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACt < 2:244839/232‑1 (MQ=255) gTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCCGGCGGTGAAGGGGTTCGTG‑CCAGCCCTGCGCCAACGGGGGTCGGCACTATCCGCCACAGGAATTACCGTGCGGGGCGCGGGTTTGATCCCAAAAGGATGGCTgagcgaaacc > 2:694189/1‑231 (MQ=255) gttccccAACTTTTTGGGCGTTTATCCCCATCACTTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGGCCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCAt < 2:895753/235‑1 (MQ=255) ggtCCCAACATTAGTGGCGATTATCCCCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCAt < 1:57686/236‑1 (MQ=255) cccAACATTCTGGGCTATTATCACCATCAACTTTTGCATCGGG‑AAAATTGCCCGTGGCGGTCCGGTCGACCGGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCt < 1:530299/239‑1 (MQ=255) tGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGGGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCAATCATCGCTACGGGTTTGa > 1:493159/1‑239 (MQ=255) aTTATCCCCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCAATCGCCGACATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGc < 1:58590/238‑1 (MQ=255) aTTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGGG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGCCAGAAATTACCGTGGGGGACGCGGGTTAGAGCCAGAAATGATGCCTGGGGTAACTCATCCCTCCGGTTTTGTAAAGcc > 2:900663/1‑239 (MQ=255) ttATCCCCATCAACTTTTTCATCGTG‑CAAATTGCGCCGGGCGGTCCGGTCGACCGGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCg < 1:119934/239‑1 (MQ=255) ttttcccacttaCTTTTTTTTCCTGCCAAATTGCCCTGGGCGGGCCGGTGCACCGGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCg < 2:729307/228‑1 (MQ=255) aCCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGGTTAGATCCCGAAGGGATAGCCGAGATCACTCATCGCACCGGGTTTGGTAAACCGAA‑cc > 1:925118/1‑238 (MQ=255) cAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACCGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGGAGTGATCGCTGGAATCACTCCTCGCTACGGGTTTGATAAGCCGAG‑CCACGaa > 1:18946/1‑238 (MQ=255) aaCTTTTTCATCGTG‑CAATTTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACg < 1:1162952/239‑1 (MQ=255) ttCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCCGCGACAGTAATTTCCGTGGCGGACGCGGGTTAGATCCCGAAAGGGTCGCTGAGGTCACCCAACCCCACGGGTTTGGTAAACCGATACCAC‑AACGGTACtt > 2:280299/1‑239 (MQ=255) ccGTG‑GAAATTGCGCCTGGGGGTCCGGTCGAACCGGCCATCGCCGCCATTGATTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCaaa < 1:1202007/238‑1 (MQ=255) atttGGGCCGGGCGGTCCGGTCGACCGGGCCATCGCCGCCATTGGGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGctct < 2:167134/237‑1 (MQ=255) aaTTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGctct < 1:694189/239‑1 (MQ=255) gggcCTGGGGGCCCGGTCGACCAGGCCATGGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGCTCTGGGa < 1:280299/237‑1 (MQ=255) gCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGCTCTGGGACTACAt < 1:900663/238‑1 (MQ=255) cgccAGGCCATGGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGAtt < 1:255463/236‑1 (MQ=255) tCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGAtt < 2:280250/127‑1 (MQ=255) tCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGAtt > 1:280250/1‑127 (MQ=255) cccccgccATTGTGTTTGGTAATGGTGGGGGTTACCCCGTGGCAGGCGGTGAAGTGGGTCTGG‑CCGGCCAGGCGCAAACGGGGGGCGGGAATATCAGCGACAGTAATTACCTGGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGAACACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGc < 2:1223671/236‑1 (MQ=255) cgccgcCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGGG‑CCAGCCATGCGCAAACGGGGGGCGGCAATATCAGCGGCAGTAATTACCGGGGCGGACCCGGATTAGGTCCAGAAAGGATCGCTGAGATCACCCATCGCCCCGGTTTTTGTAAGACGAT‑TCCCCAACGGTAATTCCAAATGCCCTGGGACTACAACCGCTTTTGGTTTGGGGGTAGcc > 2:634829/1‑239 (MQ=255) gccgccATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGGGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGGCGCGGAGTAGATCCAGAAGGGATCGCTTAGATCACTCCTCGCTTCGGTTTTGGTAAACCGAT‑CCCCGAACCTTACTTCCAAATGGTCTGGGCCTACAAACCCTTTGAttttttggaaaaccc > 2:120763/1‑228 (MQ=255) aTTGAGTTTGGGAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCAAGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGGCGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCg < 1:938578/239‑1 (MQ=255) tttGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGGTTAAAGCCAGAAGTGATCCCTGGGATAACTCAACGCCACGGTTTTGGAAAGCCGCT‑CCCAGAACGTTACTTCAAAAGGGCCTGGGACAAAATCCCCTTTTATTTTGGGGTTAACCTtttttgaacgg > 2:1257699/1‑231 (MQ=255) tttGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGGGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGAAGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTTGTAAGCCGAT‑CCACGAACGTTACTTCAAAATGCTCTGGGACTCAATCCGCTTTGATTTTTGCGTTAGCCTGTTTCCCaagg > 1:924358/1‑235 (MQ=255) ttgTAATGCCGGGGTGTTCCCCGGCGGCGGGTGTGAAGGTGGTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCt < 2:493159/237‑1 (MQ=255) tGGTAATGCCGGAGTATTTCCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCt < 1:114314/239‑1 (MQ=255) tGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCaaaa < 1:298348/179‑1 (MQ=255) gggtttttcccGGCGGAGGCGGTGAAGGGTGTCGTG‑CCCGCCAGGGGGAAACGGGTGTCGGCAATTTCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACg < 2:715666/231‑1 (MQ=255) ttATTACCCGGGGCAGGGGGTGAAGGTGTTCGGG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc < 1:3891/237‑1 (MQ=255) gttttccccGGCGCGGGGGGTGAAGGGGTTCGGG‑CCAGCCAGGGGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc < 2:924358/232‑1 (MQ=255) gTATTCCCCGGCGCGGGGGGTGTAGGTTGTCGGG‑CCAGGCATGGGCAAACGGGTGGCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCTCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGTCGc < 2:287688/238‑1 (MQ=255) gTATTACCGGGCGGGGGCGGTGAAGGGTGTCGTG‑CCAACCATGGCCAAACGGGTTTCGGAAATATCAGCGAAAGTAATTCCCGTGGCGGACGCGGATTAGATCCAGGAGGGAGCGCTGAGATCACGCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc < 2:992145/238‑1 (MQ=255) gTATTACCCGGGCCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc < 1:446735/238‑1 (MQ=255) gTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGctct < 2:1058203/178‑1 (MQ=255) gTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGctct > 1:1058203/1‑178 (MQ=255) ttccccGGGCCAGGCGGTGAAGGTGTTCGGG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGAt < 2:1067915/236‑1 (MQ=255) gggccAGGCGGTGAAGGGGTTCGTG‑CCAGCCATGCGCAACCGGGTGTCAGCAAAAACAGCGACAGGAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGa < 1:1301729/235‑1 (MQ=255) cgcAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCCAAATGCTCTGGGGCTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGGGCTGACGCTGATTTAAGACa > 1:1067915/1‑239 (MQ=255) cgcAGGAGGCGAAGGTGGTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGAAGCGGATTAGATCCAGAAAGGATCGCTTAGATCACTCATCGCCACGGGTTTTAATAGCCGAT‑CACCGACAGTTACTTCACAAAGCTCTGGGACTACATCCGCTTTGATTTTGGGGTTAACCTTTTTTCCAGCGCCACGCGGCGGGAGCGGATTaaaaaaa > 2:1232401/1‑235 (MQ=255) gggggAAGGTTTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGGGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTg < 2:1110620/234‑1 (MQ=255) ggTTAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGc < 1:68601/238‑1 (MQ=255) | TACCTGGTGGTATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGA‑GTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTG‑CAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTG‑CCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGAT‑CCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGC > NC_000913/2274115‑2274578 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |