| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,680,185 | T→G | 25.3% | V256G (GTG→GGG) | kdgK → | 2‑dehydro‑3‑deoxygluconokinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,680,185 | 0 | T | G | 25.3% | 110.4 / 5.4 | 77 | V256G (GTG→GGG) | kdgK | 2‑dehydro‑3‑deoxygluconokinase |
| Reads supporting (aligned to +/- strand): ref base T (16/36); new base G (15/7); total (34/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.35e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AAGAAGAGACACAGCAGGTGTACCAACAAATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGT > NC_000913/3679948‑3680418 | aagaaaAGCCACAGCAGGTGTCCCAACAAATGCTGGAATTCACGGATATCGCCTTCCTGACGCTGGAGGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTg < 1:350420/239‑1 (MQ=255) acacAGCAGGTGTACCAACAAATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGGGATCggaa > 1:565598/1‑235 (MQ=255) acacAGCAGGTGTACCAACAAATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGGGGATGGTCCGGCGGGGGAACCCGCGGAAGAAAAAGAGAGTGATa > 2:670813/1‑238 (MQ=255) gcagGTGTACCAACAAATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAAATGCCGAAAGGAAAAATGATCGGTacacccc > 1:1008758/1‑234 (MQ=255) gcagGTGTACCAACAAATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGGGAAACTGCCGAAAGAAAAAGGGATCGGTaccacc > 1:600765/1‑238 (MQ=255) tgtACCAACAAATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGGGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGGGAAACTGCCGAAAGCAAAATGGATCGATaccacccgcacg > 1:608688/1‑233 (MQ=255) tACCAACAAATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGGGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGGGGGGAAACTGCCCGAAGAAAAAAGGAACGATaccaccccggcggg > 2:783959/1‑231 (MQ=255) aacaaaaaATGCTGGAATGCACGGAAATCGCCTTCCTGACGGTGGACGCCGAAGACGCGGTGGGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGc < 2:957718/237‑1 (MQ=255) ccacaaATGCTGGAATGCACGGCTATCGTCTTCCGGACGCTGGCCGACGAAGACGCGCTGTGGGGTCCACAGCCGGTGGAAGACGTCATTGCGCGCACCCATATCGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGa < 1:1076826/237‑1 (MQ=255) aacaaATGGTGGAATGCACGGATATCGACTTCCGGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGAc < 1:903424/239‑1 (MQ=255) aaaTGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGGAAAAGGGATCGATACCACCGCAGCTGGCGAccct > 1:1010621/1‑239 (MQ=255) gAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGGTAGTGGATGTTCCGGCGGGGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAggg > 1:1031205/1‑236 (MQ=255) aaTGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGGGATCGATACCACCGCAGCTGGCGACCCTTTCAGGGcc > 1:896174/1‑239 (MQ=255) cACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGGGATCGATAACACCGCCGCCGGGGACCCTTTCAGGGCCgggg > 2:555147/1‑237 (MQ=255) cACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGCGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAACGAAAAAGTGATCGTTACAACCGCAGCTGGCGGACCTTTCAGGGCCgggt > 1:448326/1‑237 (MQ=255) aCGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGCAACCACCGCACCTGGCGACCCTTTCatggacgggta > 1:710992/1‑229 (MQ=255) atacCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGc < 1:920956/229‑1 (MQ=255) gCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGt < 1:1040603/239‑1 (MQ=255) ccTGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGGGGAAATGCCGAAAGAAAAAGTGATCGATACCCCCGCAGCTGGCGACACTTTCAGAGCCGGGTAACTGGCGGGAcaa > 2:68634/1‑236 (MQ=255) ccTGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGACTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGt > 1:867027/1‑238 (MQ=255) ggcTGGGGGGGTAACGGCCGGGGGAGGGCTTCATGGCGGCTAACAATAACGGGGGGGGGAAGGAAGTGGGGGTGAAACGCGGGGCGGATTCTTGCCAGGTGGCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGGGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGAc < 2:25024/238‑1 (MQ=255) cTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGGGAAACTGCCGAAAGAAAAAGGGATCGATACCACCGCAGCTGGCGCCTCTTTCAGTGCCGGTTTTCTGGCGGTACGTCGGACAGGCGGCAGCGCG‑GC‑AGCcgc > 1:438089/1‑239 (MQ=255) taaCCGCCGGTGGAAGACGTCATTGCGCGCCCCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGAGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAAc < 2:1015021/237‑1 (MQ=255) aaCAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGt < 1:743659/239‑1 (MQ=255) aCAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGATACTGCCGAAAGAAAAAGGGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGGCAGGCGGCAGCGCG‑GA‑AGGCgcggcgcaccggg > 1:858973/1‑232 (MQ=255) aCAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGCAAGAAAAAGGGATCGATACCACCGCAGCTGGCGACCCTTTCAGTGCCGGTTATCTGGCGGTACGTCTTACAGGCGGCGGCGCG‑GA‑AGACGCGGCGAAACggg > 1:942348/1‑237 (MQ=255) ccGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGCAAGAAAAAGTGATCGATACCACCGCAGCTGGGGACCCTTTCCGGGCCGGTTATCTGGGGGTACCCCTTACAGGCGGGAGCGCG‑GA‑AGACGGGGGGAAAAGggggaa > 2:1046029/1‑237 (MQ=255) cGTCATTGCCCCCACCCATAACGCGGGTGGGAAAGAATGGGGGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGc < 2:710992/237‑1 (MQ=255) ttCAATGCGCGGCCCCAGAACGGGGGCGTGAAAGAAGGGGTGGTGAACCGGGGGGCGGATTCTTGCCTGGCGGCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAg < 1:798754/238‑1 (MQ=255) ccccATAACGCGGGGGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCa < 1:173736/238‑1 (MQ=255) aCCCATAACGCGGGCGTGAAAGAAGAGGTGGTGAAACTCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAAATGCCCAAAGAAAAAGAGATCGATACCACCGCCGCTGGCGACTCTTTTATGGCCGGTTATTTGGGCGACCGTCCAACAGGCGGCAG‑GCGCGA‑AGCCGCGGCCAAATGGGGGAGCCAGGCCGCCAGGAcctgtaacaa > 2:860439/1‑231 (MQ=255) gggggggggAAAGGAGTGGTGGGGAAGCGCGGGGGGGATTTTTGCCTGGTGTCAATTGCGGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCgcgg < 2:947313/231‑1 (MQ=255) cggggCGGTAAAGAGGGGGGGGGGAAACAGGGGGCGGTTTCGTTCCGGGTGTCCCTTGGTGAGAAAGTGTTAGGTGGTGTTCCGGCGGGGAATCTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACATCTGACAGGCGGAAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTAGCGTTATTCAGTATCgagg < 2:448326/237‑1 (MQ=255) gggCGTGAAAGAAGGGGTGGTGAAACGGGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGCTATTCAGTATCgcgg < 1:670813/237‑1 (MQ=255) ggCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCCCAACGACCGGTATTTCGTAACGCGgcgc > 1:259065/1‑239 (MQ=255) ggCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGGGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTGATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGGATCCCGgcgc > 1:934758/1‑239 (MQ=255) ggCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGGGAAACTGCCGAAAGAAAAAGGGATCGATACCCCCCCCGCGGGGGACTCTTTCCGTGCCGGTTATCTGGCGGTACGCCTGCAAGGCGGCAGCGCG‑GAGAGAC‑CGTCGAAAAGTGGGCACCCGCCCCCACGGACCCTAATTCAGAAttggggggg > 2:288435/1‑231 (MQ=255) ggtggtgAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGt < 1:645313/238‑1 (MQ=255) gggggtgAAACGGGGGGTGGTTTTTTGCCTGGGTGCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGGAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGt < 2:438089/235‑1 (MQ=255) cggggggggggTTCTTGCCTGGTTGCCATTGCTGGGGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGGGATCGATGCCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGcc < 2:333536/236‑1 (MQ=255) cgcgggtgcgtttCTGGCGTGGGGGCGATTGCTGGAGGAGGGTTGGGGGATGGTCCGGAGGGGAGACTGCCGAAAGAAAAAGGGGTCGATCCCCCCGCAGCTGGCGACTCTTTCAGGGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGcc < 2:121454/228‑1 (MQ=255) gggCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGGATCGCGGCGCG‑ATTATCCCCCCGGAGGCGAGGCCCGcc > 1:12290/1‑238 (MQ=255) ttCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGGGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCCGAAGGACCGTTATTCAGTATCGCGGCGCG‑CTTATCCCCCGTGAGGCGATGCCAGCGTCAAAgc > 1:649307/1‑239 (MQ=255) ttttGCCTGGTGTCCATTGCGGGCGAAGGGTTAGTGGATGTTCCGGCGGGGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACgc < 2:867027/236‑1 (MQ=255) tCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACgca < 1:880669/239‑1 (MQ=255) tgtCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGGAACTGCCGAAAGAAAAAGGGATCGATACCACCCCAGCTGGCGACTCTTTCCGTGCCGGATATCTGGCGGTACCTCTGCCTGGCGGCAGCGGG‑GG‑AAACGCGGCGAAAAGTGGGACCCTGACCGCACGGACCGTTATTCAGTGTCCCGCGGCG‑GGCATCCCGCCGGAGGCGGAGCCCGCGAAAACgcaggcaatacaa > 2:319040/1‑230 (MQ=255) tggccATTGGTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCa < 1:555147/235‑1 (MQ=255) tCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGGGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCCCGTGAGGCGGTGCCCACGTAAAAGCAGCAAATGCaaaa > 1:732646/1‑239 (MQ=255) cATTGCTGGCTAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAgg < 1:829001/239‑1 (MQ=255) cATTGCTGGCGAATGGTTAGTTGATGTTCCGGCGGTTAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACGCTTTCAGGGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAgg < 1:736512/239‑1 (MQ=255) cATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCCGTATCGCGGCCCG‑ATTATCCCGCGTGAGGCGATTCCCGCCGAAACGCAGCAATTGCCAAAg > 1:95165/1‑238 (MQ=255) cATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGGTATTAAGTATCGCGGCGCG‑GTTATCCCGCCGGAGGCGATGCCCGCCTAAACGCAGCAAATGCcaaaag > 1:40677/1‑237 (MQ=255) cTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGGACCTGACCGCAAGGACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCCCGTGAGGCGATGCCAGCGGAAACGCAGCCTATGCAAAAGGcgcgg > 1:814786/1‑235 (MQ=255) gCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCCCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAAAGCAGCCTATGCAAAAAGCTGGGTaa > 1:833373/1‑239 (MQ=255) gCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGGGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GG‑AGACGCGGCGAAACGTGGGCACCCGACCGCCAGTACCGGTATTCAGGATTCCGG‑GCGCATTAGCCCCCGGGAGGCGAGGCCCGGCTAAACACAGCAAATGAAAAAAGCAgggaaa > 2:25757/1‑235 (MQ=255) tttgTGGATGTTCGGGCGGTGAAACGGCCGAAAGAAAAATGCATCCATCCCACCGCAGCTGGCGCCTCTGTCAAGGCCGGTTATCTGGGGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTa < 2:896450/235‑1 (MQ=255) ttAGTGGATTGTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTa < 1:288435/238‑1 (MQ=255) ttAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTa < 1:783959/238‑1 (MQ=255) ttAGTGGAGTGTCCGGGGGTGAAACTGCCGAAAGAAAAAGTGATCGAGACCTCCGCAGCTGGCTACCGTTTCAGTGCCGGTTATCGGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTa < 1:111681/238‑1 (MQ=255) tgggggtttgccGGCGGGAAAACTGCGGAAAGAAAAAGGTACCGAACCCCCCGGAGGCGGCGTCTCTTCGAGTGCCGGTTAGCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTAccc < 2:858973/229‑1 (MQ=255) aGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCACCGGAAACGCAGCATATGCAAAAAGCTGGCTAAAGTGTTAcc > 1:392734/1‑238 (MQ=255) tGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCg < 1:720350/141‑1 (MQ=255) ggATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCct < 1:557312/238‑1 (MQ=255) ggATGCTCCGGCGGTGAAACTGACGAAAGAAAAAGTGATCGATCCCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGGGGTACGTCTGACCGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCct < 1:754459/238‑1 (MQ=255) gTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATc < 1:775355/239‑1 (MQ=255) ggcggTGAAACCGCCGAAAAAAAAAGAGATCGATACCACCCCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGGACGTCGGACAGGCGGCAGCGCG‑GG‑AGACGCGGCGAAACGTGGGCACCTGGACGCAAGTACCGCTTTTCACCTTCCCGGCCAG‑ATTAATCCCCGCCAGGCGATGCCAGGGTCAACCCTGCACATGAAAAAAGCCGTATCAAGATTTACCCCCCATTCCAGc > 2:210074/1‑238 (MQ=255) gggtaatcggCCGAAAGAAAAAGTGATCCATACCCCCGCAGCTGCCGCCTCTTTCAGGGCCGGTTTTCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCa < 2:95165/229‑1 (MQ=255) ggTGAAACTGCCGAAAGAAAAAGTGATCGATCCCACCGGAGGTGGCGACTCTTTCAGGGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCa < 1:420048/238‑1 (MQ=255) aaCTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATa < 1:336420/239‑1 (MQ=255) aaCTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATa < 1:399025/239‑1 (MQ=255) cTGGCGAAAGAAAAAGGTATCGATCCCACCGCAGGTGGCGCCTCTTTCAGTTCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGGGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATaaa < 1:666802/239‑1 (MQ=255) cTGCCGAAAGAAAAAGTGATCGATACCACCGGAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATaaa < 1:195349/239‑1 (MQ=255) cGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGTTAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATa > 1:170361/1‑237 (MQ=255) aaaaGTTTTCGCTGCCCCCGCGGCTGGCGACTCTTTGCGTGCCGGTTATCGGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGAGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGt < 2:932287/239‑1 (MQ=255) aaaaGTGATCGATCCCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATgg < 1:1046029/238‑1 (MQ=255) aaaaGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGt < 1:814412/239‑1 (MQ=255) aaaaGGTATCGATCCCCCCCCAGCTGGCGACTTTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCGGCTCATCCATAAATACCTGATGGt < 2:1010621/239‑1 (MQ=255) | AAGAAGAGACACAGCAGGTGTACCAACAAATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCG‑GA‑AGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCG‑ATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGT > NC_000913/3679948‑3680418 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |