| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,177,123 | A→G | 8.7% | S394G (AGC→GGC) | tufB → | translation elongation factor EF‑Tu 2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,177,123 | 0 | A | G | 8.7% | 421.4 / 2.3 | 169 | S394G (AGC→GGC) | tufB | translation elongation factor EF‑Tu 2 |
| Reads supporting (aligned to +/- strand): ref base A (69/80); new base G (12/5); total (82/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.39e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 169 total aligned reads displayed.
TGAAGGCGGCCGTCATACTCCGTTCTTCAAAGGCTACCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGAAAAGCTAATACGCGTTTCGATTTGGTTTGCCTCGCGATCGCGGGGTGAAAATGTTTGTAGAAAACTTCTGACAGGTTGGTTTATG > NC_000913/4176888‑4177360 | tGAAGGCGGCCGTCATACTCCGTTCTTCAAAGGCTACCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCt < 1:136662/239‑1 (MQ=33) aGGCGGCCGTCATACTCCGTTCTTCAAAGGCTACCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGTCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTaa < 1:454166/238‑1 (MQ=18) aGGCGGCCGTCATACTCCGTTCTTCAAAGGCTAACGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTCCCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTaa < 1:612964/238‑1 (MQ=18) aGGCGGCCGCCTTACTCCGTTTTTCAAAGGCTACCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTaa < 2:633111/238‑1 (MQ=18) cggcCTTCAACCTCCGTTCTTAAAAGGCTCACGGCCGGAGTTTTACCTCCGTGCTACGTGCGGGGCTGGGTCCATCGAACTGCCGGAAGGCGTAGGGATGGGAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAAtt < 2:587354/237‑1 (MQ=11) cttCATCCTCCGTTCTTCAAACGCGTGCGTCCGCAGGTTTACTTCCGTACTACTGACGTGACGGGTACCATGGAAACGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGATAACAATGAAGTGGTTGTTACCCTGAGTCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGAt < 2:698415/237‑1 (MQ=11) ttcttcAAAGGCTACCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGGGATGGACGCAGGTCTGCGTTTAGCAATCCGTGAAGGCGTGCGTACCGTTGGCGCGGGCGTTGTAGCAAAAATTCTGGGCGAATTGGCGATAACATTTGACga > 2:453145/1‑238 (MQ=11) ttcttcAAAGGCTACCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGCCGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGGTGTATCAAAAGTTTTGGGCCAATTGCCGTTAACCTTTGCCGc > 1:256675/1‑239 (MQ=11) ttcttcAAAGGCTACCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGCCGGGCTGCGTTTCGACATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTACCAAAAGTTCTGAGATAATGACCGATAAAGTTTggggc > 2:324105/1‑235 (MQ=11) ttcttcAAAGGCTACCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTTCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGGCCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGACGAAAAAATTTGACga > 2:527832/1‑238 (MQ=255) ttcttcAAAGGCTACCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGCCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTGGCAAACGTCTTGGGTTAATTGCCGTTAACATTTGACGc > 1:375862/1‑239 (MQ=11) aaaGGCTACCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATgcg < 1:339772/239‑1 (MQ=255) aaaGGCTACCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATgcg < 1:1085320/239‑1 (MQ=255) aaaGGCTACCGTCCGCAGTTCTACTTCCGTACTACTGACGGGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATgcg < 1:721453/239‑1 (MQ=255) aGGCTACCGTCCGCAGTTCTACTTCCGTACTACGGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCa < 1:337946/239‑1 (MQ=255) aCCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGACGGCGGCCGTACCGTTGGCGCGGGCGTTGTTGCAAAGGTTCTGAGGTAATTGCCGCTAACATTTTACGAAATCCGACCTaaa > 2:848780/1‑239 (MQ=11) aCCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCCCGGGCGTTGTAGCAAAAGTTCTGGGCTAATTGCCGATAACATTTACCGCAATGGGCACCaaa > 2:60778/1‑239 (MQ=255) aCCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGGACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGCGCTAATTGCCGGAAAAATTTGACGCAATGCGCaacaaa > 2:342791/1‑234 (MQ=255) aCCGGCCCCTGTTTTTCTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTaaa < 2:248531/239‑1 (MQ=255) cggccGGAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAg < 1:1074162/236‑1 (MQ=255) ccGCAGTTCTACTTCCGTACTACTGGCGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGc < 1:718236/239‑1 (MQ=255) cGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGTTAACATTTGCCGCAATGCGCACTAAAAGGGct > 1:197331/1‑238 (MQ=255) gCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACCTCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTGCGAAAAGTTTTGAGCCAATTGCCGGAAACATTTTGAGCAAAGCGCCACAAAAgggaaa > 2:942351/1‑236 (MQ=11) cTTCCGTTCTTCCGGCGTGACTGGTACCAACGAACCGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGAAAACATCAAAATGGTTGTTACCCTGATCCCCCCGAC‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATg < 2:732513/239‑1 (MQ=18) ccGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGc > 1:634829/1‑237 (MQ=255) gTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGCTGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTGGCAAAAGTTCTGGGCTAATTGCCGTTAAAATTTACCGCAATCGCCACTAAAAAGGCCGCATTTGTTGCCCtt > 2:953414/1‑239 (MQ=14) gTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCACTCCGTGAAGGCGGCCGTCCCGTTGGCGCGGGCGTTGTCGCAAAAGTTCTGAGCTAATTGACGTAAAAATTTTACGCAATGGGCACTAAAAGGGCACCTTTTCAAGcccct > 2:244754/1‑237 (MQ=14) gTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTTACGCAATGGGCACTAAAAGGGCAACATTTGAGGCCCtt > 2:525717/1‑239 (MQ=255) gTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAA‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGGTGGCGCGGGCGTTGTAGCAGAAGTTCTGGGCTAATTGCCGCTAAACGTTGAGGCCATGGGCACAAAAAGGGCCTCAATTGATGCCCtt > 2:119246/1‑239 (MQ=14) ctggggtggcgggTACCATCGAACGGCCGGAAGGCGTAGAGATGGGAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCa < 1:324105/228‑1 (MQ=255) ctGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAACTGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCCAAAGTTCTGAGCTACTTGCCGATAAACTTTTAGCCAATGCGCCACAAAAGGGCATCATTTGATGCCCttttttc > 2:277310/1‑236 (MQ=14) ctGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATgcg > 2:971442/1‑205 (MQ=255) ctGAAGTTAATGGTACCATCGAACTGGCGGAAGGCGTAGAGATGGTAATGCCGGGCGACACCATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCa < 1:477518/239‑1 (MQ=255) aCGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCACTAGGCACTAAAAGGGCATCATTTg > 2:646359/1‑222 (MQ=255) gTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCCCTAAAAGAGCATCATTTGATGCCCTTTTTGCACTCtt > 1:562933/1‑239 (MQ=255) gACTGGGCCCATCGAACTGCCGGGAGGCGTAGAGATGGTAATGCCGGGGGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTc < 1:942351/239‑1 (MQ=255) aCTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTCAAAAGGCAACATTTGATGCCCTTTTTTCACGCttttg > 2:477518/1‑237 (MQ=255) tGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAg > 1:385157/1‑165 (MQ=35) tCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCACAAGTTCTGAGCTAATTGCCGATAACATTTGACCCAAGGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCCCGCTTTCGTACCATaa > 1:402098/1‑237 (MQ=255) aCTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCa < 2:599478/217‑1 (MQ=255) cTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCCAAAGTTATGGGCTCATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGAACCAAAACCGGGcc > 2:530013/1‑238 (MQ=255) cTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGGGCTAATTGCCGATAACCTTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAAAACCTGGcc > 2:1057071/1‑238 (MQ=255) tAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGCCGTTGTAGCAAAAGTTCTGAGCTACTTGCCGATAACATTTGCCGCAATGCGCACTAAAAGGGAATCATTTGATGCCCTTTTTGCACGCTTTCTGACCAGAACCTGGCTCAAAAGGGAtttt > 2:931876/1‑239 (MQ=21) gggaTGGGAATGCCGGGCGAAAACATCAAAATGGTTGTTCCCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCt < 1:434152/237‑1 (MQ=255) ggaTGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCt < 1:604921/237‑1 (MQ=255) gagtGGTAAGGCCGGGGGAAAAAATCAAAATGGTTGTTCCCCTGATCCACCCGAT‑CGCGATGGGCGACGGTCGGCGTTTAGCAATCCGTGAAGGCGGCCGAACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCt < 2:197331/235‑1 (MQ=255) gaTTGTAATGCCGGGCGACAACATCAAAATGGTTGTTAACCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCt < 1:768858/237‑1 (MQ=255) gaTGGTAATTGCGGGCGAAAACATCAAAATGGTTGTTACCCTGATCCCCCCGGT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCt < 1:953414/237‑1 (MQ=255) ggTAATTGCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTGCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCATTGCGCACTAAAAGGGCATCATTTGATGCACTTTTTGCa < 1:556036/196‑1 (MQ=255) tGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAAt < 1:67796/239‑1 (MQ=255) ggCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATACCATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTTTCATATTCATTg > 1:331957/1‑239 (MQ=255) ggCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCAtt > 2:617721/1‑238 (MQ=255) ggCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACACTTGACGCAATGCGCCCTAAAAGGGACTCATTTGATGCCCTTTTTTCCCGCTTTCCTACCAGAACCTGGCCCATCAGGGATTTTCTTTTTCCAAAACAtt > 2:484311/1‑238 (MQ=21) ggCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAAAATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCTTAATCATTg > 1:288968/1‑239 (MQ=255) gACAACATCAAAATGGTTGTTACCCTGATCCCCCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCt < 1:631659/238‑1 (MQ=255) acattcaaaTGGTTGGTTCCCTGGACCACCCGAT‑CGGGATGGACGGCGGTCTGCGTTTCGGAAGCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGAc < 1:817223/233‑1 (MQ=37) acaTCAAAATGGTTGTTCCCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGAc < 1:383467/239‑1 (MQ=255) acaTCAAAAGGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGAc < 1:525717/239‑1 (MQ=255) tataTGTTTGTT‑CCCTTATTCACCCCAGCCGCGACGGACGGTGTTCGTCGTGTAGCAAGCCGGGAAGGCGGCCTTACCGTTGGAGAGGGGTTTGTAGCAAAAGGTCTGAGCGAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTGTCTTTGTCAGAATCATTGCTGAGACAGGct < 2:774779/236‑1 (MQ=255) aaaaTGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGct < 1:24995/239‑1 (MQ=255) aaaTGGTTGTTACCCTGATCCCCCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGctc < 1:342791/239‑1 (MQ=255) tGGTTTTTTCCCTGATCCACCCGTT‑GGCGGTGGACGAGGGTTTTCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGGTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGt < 2:354577/239‑1 (MQ=38) gttgttACCCGGATCCACCCGAT‑CGCGATGGACGAAGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTg < 1:527832/239‑1 (MQ=255) ttgttACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGTTGCCCTTTTTGTACGCTTTCGTACCCGAACCTGCCCCATCATGGATTTTTTTTTTCATAACCCTTGCTAAGACAGGCCTTGttat > 2:1008367/1‑237 (MQ=25) tgttACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAg < 1:874261/239‑1 (MQ=255) tgttACCCTGACCCCACCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAg < 1:60778/239‑1 (MQ=255) gttACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCtcat > 1:89138/1‑191 (MQ=255) gttACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCtcat < 2:89138/191‑1 (MQ=255) aCCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTCCCGTTGGCGCGGCCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGCCGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACACTTTCGTACAGGAACAGGGCTCCTCAGTGATTTTCTTTTCAATATTACTTGCTTAAAAAGGCTCGGTTggggagt > 2:718169/1‑236 (MQ=21) aCCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCg > 1:757186/1‑239 (MQ=255) tGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCCTAATCATTGCTGAGACAGGCTCTGTTGAGGGCGtata > 1:472194/1‑239 (MQ=255) gATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATg < 2:764824/121‑1 (MQ=255) ccccgt‑CGGGATTGACGGAGGTTTGCGTTTCACAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGaa < 1:1047700/234‑1 (MQ=255) cccgtctggggtGGGCGGCGGTCGGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGaa < 2:830372/228‑1 (MQ=255) ccGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCCTCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGCTTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGGGGGCGTTTAATCCGaaa > 1:1068733/1‑239 (MQ=255) gAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTATTGCCCTTTTTGCACGCTTTGGTACCAGAACCTGGCCCATCAGTGATTTTCTTTGTCATAATCATTGCTGAACCAGGCCCTGTTGGGGGCGAATAATCCGAAAAg > 2:219728/1‑239 (MQ=38) t‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGCCGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCCTTGCTGGGACAGGCTCTTTTGAGGGCGTATACCCCGAAAAGCt > 1:571482/1‑239 (MQ=255) cgtttgtttgggTTTCGCAATCCGTTAAGGCGGCCGTGCCGTTGGCGGGGGCGGTGTAGCCAAATTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCACTTTTTGCACGCTTTCGTACCAGATCTTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCGGAGACAGGCTCTGTTGAGCGCGTATAATCCGAAAGGCTAATACGCGt < 2:651474/227‑1 (MQ=255) cgacgGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGACAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGAAAAGCTAATACGCGtt > 1:99574/1‑239 (MQ=255) tCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGAAAAGCTAATACGCGTTTCGAt < 1:153113/238‑1 (MQ=255) tGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGAAAAGCTAATACCCGTTTCGATTTg > 1:828511/1‑239 (MQ=255) gTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGAAAAGCTAATACGCGTTTCGATTTGGt < 1:931876/238‑1 (MQ=255) tCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGAAAAGCTAATACGCGTTTCGATTTGGTTTGCCTcgcg > 2:338817/1‑239 (MQ=255) tCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCACTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTTAGGGCGTATAATCCGAAAAGCTAATACGCGTTTCGCTTTGGttttactctcg > 1:439056/1‑231 (MQ=255) aGGCGGCCGTTCCGTTGGCGGGGGCGGTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGGAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGAAAAGCTAATACGCGTTTCGATTTGGTTTGCCTCGCGATcgcg < 2:128715/238‑1 (MQ=255) aGGCGGCCGTTCCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGAAAAGCTAATACGCGTTTCGATTTGGTTTGCCTCGCGATcgcg < 1:553414/238‑1 (MQ=255) aGGCGGCCGGACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGAAAAGCTAATACGCGTTTCGATTTGGTTTGCCTCGCGATCGCgg < 1:1000720/239‑1 (MQ=255) ttGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCa < 1:856864/95‑1 (MQ=255) ttGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCa > 2:856864/1‑95 (MQ=255) gcgGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGAAAAGCTAATACGCGTTTCGATTTGGTTTGCCTCGCGATCGCGGGGTGAAAATGTTTGTAGa < 1:485193/238‑1 (MQ=255) tttgtaaaaGTTTTGAGATAATTGCCGATAACATTTGACGCAATGCGCAATAAAAGGTCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGAAAAGCTAATACGCGTTTCGATTTGGTTTGCCTCGCGATCGCGGGGTGAAAATGTTTGTAGAAAACTTCTGa < 2:571482/234‑1 (MQ=255) tAGCAAAAGTTCTGTGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGGACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGGCATAATCATTGCTGAGACAGGGTCTGGTGAGGGCGTATAATCCGAAAAGCTAATACGCGTTTCGATTTGGTTTGCCTCGCGATCGCGGGGTGAAAATGTTTGTAGAAAACTTCTGAc < 2:375862/239‑1 (MQ=255) tAGCAAAAGTTCTGAGCCAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTTATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGAAAAGCTAATACGCGTTTCGATTTGGTTTGCCTCGCGATCGCGGGGTGAAAATGTTTGTAGAAAACTTCTGAc < 2:153323/239‑1 (MQ=255) aGCAAAAGTTCTGAGCTAATGGCCGGTAACATTTGACGCAATGCGCACTAAAAGGGCTGTATTGGATGCCCGTTTTGCAAGGTTTCGTACCAGAACCGGGCTCAGGAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGAAAATCTAATACGCGTTTCGATTTGGTTTGCCGCGCGATCGCGGGGTGAAAATGTTTGTAGAAAACTTCTGAc < 1:277310/238‑1 (MQ=255) aaaaTTTTTGGGTTATTTGCCGATTACATTTGGCGCAATGCGCACTAAAAGGGCATCATTTGATGTCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGAAAAGCTAATACGCGTTTCGATTTGGTTTGCCTCGCGATCGCGGGGTGAAAATGTTTGTAGAAAACTTCTGACAggt < 2:188090/239‑1 (MQ=255) aaaaGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGAAAAGCTAATACGCGTTTCGATTTGGTTTGCCTCGCGATCGCGGGGTGAAAATGTTTGTAGAAAACTTCTGACAggt < 1:920543/239‑1 (MQ=255) gaaGTTCTGAGCTAATTGCCGATAACATTGGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGAAAAGCTAATACGCGTTTCGATTTGGTTTGCCTCGCGATCGCGGGGTGAAAATGTTTGTAGAAAACTTCTGACAggt < 1:119246/237‑1 (MQ=255) tCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAAACAGGCTCTGTTGAGGGCGTTTAATCCGAAAAGCTAAAACGCGTTTCGCTTTGGTTTGCTTTGCGTTCCCGGGGGGAAAATGTTTTGAGAAAACTTCTTCAAggttgggta > 2:309366/1‑236 (MQ=255) tGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGAAAAGCTAATACGCGTTTCGATTTGGTTTGCCTCGCGATCGCGGGGTGAAAATGGTTGTAGAAAAATTTTGAAAGGGGGGTTTAt > 2:1038427/1‑239 (MQ=255) gAGCTAATTGCCGATAACATTTGACGCAATGCGAACTAAAAGGGCATCATTTAATGCCCTTTTTGCACGCTTTCGTCGCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGAAAAGCTAACACGTGTTTCGATTTGGTTTGCCTCGCGATCGCGGGGTGAAAATGTTTGTAGAAAACTTCTGACAGGTTGGTTTATg < 1:526800/239‑1 (MQ=255) | TGAAGGCGGCCGTCATACTCCGTTCTTCAAAGGCTACCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGAT‑CGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAATCCGAAAAGCTAATACGCGTTTCGATTTGGTTTGCCTCGCGATCGCGGGGTGAAAATGTTTGTAGAAAACTTCTGACAGGTTGGTTTATG > NC_000913/4176888‑4177360 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |