| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 665,104 | A→C | 16.9% | S29R (AGT→AGG) | rlpA ← | septal ring protein, suppressor of prc, minor lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 665,104 | 0 | A | C | 16.9% | 158.5 / 4.9 | 76 | S29R (AGT→AGG) | rlpA | septal ring protein, suppressor of prc, minor lipoprotein |
| Reads supporting (aligned to +/- strand): ref base A (33/27); new base C (4/11); total (37/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.16e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
AGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTG‑CCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAACCCCTACAACCGGCAGAATACCGCT > NC_000913/664874‑665338 | aGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTG‑CCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCg > 1:1009171/1‑238 (MQ=255) tgtCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTG‑CCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTCCATACCGCAGGCTGCGGTACACTTACCGTCTGtt > 1:558833/1‑239 (MQ=255) tgtCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTG‑CCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGtt > 1:306225/1‑239 (MQ=255) tgtCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTG‑CCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGGCCGCCCCGCTAATTTCAACTTTAGGGCCGTTACATACCCCAGGCGGCGGGACCCTTACCGCCTGtt > 2:854159/1‑239 (MQ=255) tgtCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTG‑CCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGAGGTTCGAAACGCGGGTCAGCCCCGCTAATTTCAACTCTAGGGCCGTTAAAGACCCCAAGCTGCGGGACACTTACCGCTTGtt > 2:266204/1‑239 (MQ=255) tCGGAGCGAATGCTTCCCCAGAGGCCGTGAGGTTGCGG‑CCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTg < 1:10206/238‑1 (MQ=255) ggttctattttttCGCCAGGGCCCGTCGGTTTCCGG‑CGGGGTTGGGCTCCATGGTGTCCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCt < 2:197268/227‑1 (MQ=255) gATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTG‑CCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGGCCGCCACGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGGAAACTTACCGTCTGTTGCCGa > 1:489374/1‑239 (MQ=255) aaTGCTTCGCCAGAGGCCGTCAGGTTACTG‑CCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACcatc > 1:197657/1‑239 (MQ=255) atccctccccAGGGGCCGT‑AGGTTTCCGCCCGGGTTCGGAATCCAAGATTGCCGCCAGTCCCGGCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACcatc < 1:873386/230‑1 (MQ=255) gTCAGGTTACTG‑CCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCCCAGGCTGCGGGACCCTTACCCTCTGTTGCTGGCCAACACCCCTTGTaaacaccgc > 2:55843/1‑231 (MQ=255) tcgggTTACGG‑CCGGGTTGGGCTTCATAGATGGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCcgcg < 1:386181/236‑1 (MQ=255) ggTTCGGCATCATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCATGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCcgc > 1:580603/1‑239 (MQ=255) catcatAGTTGGCCCCAAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCa < 1:854159/238‑1 (MQ=255) tGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGTGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCGGATCCCGAGc > 1:1084573/1‑238 (MQ=255) tGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACCCTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAg > 2:831643/1‑210 (MQ=255) tGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAg < 1:831643/210‑1 (MQ=255) tGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGGACATGCCCCGGGCATTCCT‑CCCGCGGTGCAAATCCCGGGcc > 2:719857/1‑239 (MQ=255) gccccccAGTCCCCCCTG‑GTTAAATCGAGACGGGTCCGGCCCGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTCCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGcc < 2:197657/234‑1 (MQ=255) ccgccAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCCCGATTTTGT‑AGCTTTTCCCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCAc < 1:719857/239‑1 (MQ=255) ccgccAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCa > 1:930112/1‑238 (MQ=255) cccccAGTCCC‑CCTGTGTTAATTGGAGGCGGTTCCTGCGCGTTTTTTT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCAc < 2:21334/236‑1 (MQ=255) cgccAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCACCTATAGGGCCGTTACATACCGCAGGCGGCGGGACACTTACCGTCTGTTGTTGCCCATCATGCCTTGTACCTGCCCCGCGCCATCCT‑CCCGCAATGCAGATcccctcaccc > 2:1018620/1‑231 (MQ=255) aGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCCCTTGTACATGCCGCGGGCATTCCT‑GCCGCGAGGCAGATCCCGAGCCACTGCtt > 2:56704/1‑239 (MQ=255) cccGCCTG‑GCTAAATCGAGCCGGATCCTGCCGGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATCCCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTAc < 1:370826/238‑1 (MQ=255) g‑gCTAAACGGGGACGGTTCCTGCTCGTTTTTGT‑ATCTTTTACCGCCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTCCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTgcg < 1:466659/239‑1 (MQ=255) gtttAAATCGGTGCGGTTTCTGCCCGTTTTTGT‑CGTTTTTCCCGGCGCGCTGGTAATCCTGATTTCCCGTCGCTGTCAGTGGTTCGAAACGCGGGTCCCCCCCGCTAATTTCAACTATGGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTgcg < 2:820485/236‑1 (MQ=255) tAAAGCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑c < 1:771307/239‑1 (MQ=255) ccGGATCCTGC‑CGCTTTTTTGCGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACCCGGGTCCGCCCCTCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTaca < 1:882122/237‑1 (MQ=255) aCGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACCATTACCGCCTGTTGCGGCCCACCATCGCTTGTACAGTCCCCGAGCATTCCTCCCCGCG‑TCCAGATCCCGACCCCCCGCTTCCCCATTGGGAA‑CCCCttgcc > 2:319664/1‑235 (MQ=255) gCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCCCGAGCATTCCT‑GCCCCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCCCTTACACGCTTTTCGa > 1:430410/1‑239 (MQ=255) aTTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCg > 2:418338/1‑150 (MQ=255) aTTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCg < 1:418338/150‑1 (MQ=255) ttttGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGGGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACCCCTTACGCATTGCGCC‑CCCCTTAAACGCtttctaacaaaaa > 2:437608/1‑229 (MQ=255) ttttGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCCCTTACACGCTTTTCGGCAACAt > 1:552519/1‑239 (MQ=255) tGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACCttt > 1:557385/1‑238 (MQ=255) ttttCCCGCCGCCTTTGTAATCCTTTTTTGCCTTCCGTTTCGGGGGTTCGAAACGGGGGTCCCCCCGCCTAATTGCAACTATAGGGCCGTTACATCCCGCAGGCGGCGGTACCCTTCCCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCtgtg < 2:557385/239‑1 (MQ=255) tttACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACACCATTTTCCTGTgg > 1:1080631/1‑239 (MQ=255) tttACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTCACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCCTCGCTTGTACATTCCGCGAGCATTCCT‑GCCGCGATGCCGATCCCGAACCACTGCTTACGC‑CTGTGCACCCCCTTCCACCCTTTTCGAAAACATTTTCCTTTgg > 2:80999/1‑239 (MQ=255) tACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATCCAGATCCCAAGCCACTGCTTACGCATTTCGCC‑CCCCTTCACCCCTTTTCGCCAACCTTTTCCTGTGGgt > 2:949004/1‑239 (MQ=255) tCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGCTGCAGATCCCGACCCCCTGCTTACGCATTGCGCA‑CCTCTTCCACGCTTTTCCCCACAATTTTCCTGTGGGGGGGGa > 2:1072493/1‑239 (MQ=255) cgcgCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCTACCCACTGCTTACGCCTTGCGCC‑CCTCTTac > 1:794285/1‑204 (MQ=255) gggcTGGGAATCCTGTTTTGCCGCTGGGTTCGGGGGTTCGAAACGGGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATCCCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGAtt < 1:665025/237‑1 (MQ=255) gcccttgTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGTTAATTTCAACTATAGGGCCGTTCCATCCCGCAGGCTGCGGTACCCTTACCGTCTGTTTCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGAtt < 1:266204/233‑1 (MQ=255) cgcTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCcgc > 2:288673/1‑158 (MQ=255) cgcTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCcgc < 1:288673/158‑1 (MQ=255) tttcccaccccgTTCTGTGGTTCAAAACGTGGTCCCCCCCCGCTAATTTCAACTATAGGCCCTTTACATACCGCGGGCTTGGGTGCAGTTCCCGTGTGTCGCTCACTGCTTTCTCTTATACGGGCCGCGTGCATTCCT‑TCCAGGATGCAGATCCCCGGCCAATGCTATCGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTGCCTGGGGGTGTGGATTGACATTACAATCCCGa < 2:264247/229‑1 (MQ=255) cGTCGGGTTAAGGGGTTCGAAACGCGGGTCCCCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACCCTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCa < 1:949004/239‑1 (MQ=255) gTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATTCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGGCAACATTTTCCTTTGGGTTTGGATGGCCATTACAATCCCGAACCCa > 1:576915/1‑238 (MQ=255) gcgTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGcc > 1:1005538/1‑238 (MQ=255) cGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGAtt > 2:76844/1‑201 (MQ=255) cGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGAtt < 1:76844/201‑1 (MQ=255) accgggggTCCCCCCCCCTATTTTCAACTATAGGCCCGTTACCTACCGCGGGTTGCGGTACACTTCCCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAgcgc < 2:1080631/234‑1 (MQ=255) gcgGGTCCGCCCCGCTAATTTCAACTATAGGGCCTTTACATCCCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGa < 1:909471/239‑1 (MQ=255) gcgGGTCCCCCCCGCTAATTTCAACTATAGGGCCTTTACATACCGCAGGCTGCGGTACTCTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGa < 1:1072493/239‑1 (MQ=255) ccgGGTCCCCCCCTTTTATTTCAATTTTGGGGCCTTTCAACACCGCGGGGTGGGGTCCCCTTCCCGTCTGTTGCTGCCCATCATCGCTTGTCCATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGa < 2:430410/238‑1 (MQ=255) ccgGGTCCCCCCCGCTAATTCTAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGa < 1:350336/238‑1 (MQ=255) ccgGGCCCCCCCCCCTAATTTCAACTTTAGGGCCGTTACTTCCCGCAGGCGGCGGTCCCCTTCCCTTCTGTTGCCGCCCATCACCCCTTTTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGa < 2:1005538/238‑1 (MQ=255) ccccTCTAATTTCAACTATGGGGCCGTTACATACCGCAGGCTGCGGTACCCTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATa < 1:437608/239‑1 (MQ=255) aaTTGCAACTAAGGGGCCGTTACCACCCGCAGGCTGGGGTACCTTTACCGTCTGTTGCTGGCCCACATCGCTTGTACATGCCGGCAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGAcc < 1:550919/239‑1 (MQ=255) ttCAACTTTAGGGCCTTTTCATCCCCCAGGCTGCGGTACACTTCCCGTTTTTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGGGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGt < 2:489374/239‑1 (MQ=255) ccAACTAGAGGGCCGTTACATACCGCAGGCTGCGGTACCCTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTg < 1:55843/238‑1 (MQ=255) gggcccGTTCCCTCCCGCGGGCGGGGGTTCACTTACCCTCGTTGGAAGACCTACATCGCTTGTACTTGCCGCAGGCATTCCT‑GCCGCGATGCAGATCCCGGGCCACTGCTTACGCATTGCGCA‑CCTCTTACGCGCTTTTCGACAACATTTTCCTGTCGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGa < 2:70574/235‑1 (MQ=255) aGGCCCGTTACATGCCGCGGGCCGCGGTACACTTACCGTCTGTTGCTGACCATCCGTGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGa < 1:1071703/239‑1 (MQ=255) ggCCGTTACATCCCGCAGGCTGCGGTACCCTTACCGTCTGTTGCTGACCATCACCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGa < 1:907450/237‑1 (MQ=255) ttACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAgcg > 1:156980/1‑200 (MQ=255) ttACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTAAAATCCCGAACCCAGCCATCAGCACAATTAACGCCGATCCTCCCTAACTGACCAGTGGGAGCGGAAaccccc > 2:1039122/1‑237 (MQ=255) ttACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGCGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACCATTATCGCCGAGCCTCCATAACTGACCAGTGGAACCGGAACCCCt > 1:100957/1‑238 (MQ=255) tcaCATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTTTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTACCGCCGATCCCCCATAACTTACCACGGGGAGGGGAAccccaa > 2:761778/3‑237 (MQ=255) cAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCa > 2:59643/1‑171 (MQ=255) cAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCa < 1:59643/171‑1 (MQ=255) cAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCCGCCCACTTAGCGCCGATCCTCCATAACTGACCAGGGGGCGCGGAACCCCTAAAACCGGAAg > 2:726346/1‑239 (MQ=255) cAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAAACCCTACAACCGGccg > 1:582347/1‑237 (MQ=255) tgcctcGGTACCCTTACCGTCGTGTGCTGACCATCACCGCTTGTACATGCCGCGATCTTTCCT‑GCCGTGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAACCCCTACAACCGGCAGaa < 1:902022/234‑1 (MQ=255) ggCTGGGTTACACTTCCCGTTTTGTGCGGCCCATTCTCGCTTTGCCATGCCGCGAGCATTCCG‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCGTACCCGCTTTTCGACAACATTTTCCTGGGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAACCCCTACAACCGGCAGaa < 2:306225/239‑1 (MQ=255) gctgggttccacTTGCCTTCTGTTGCTGACCAGCATCGCTTGTACATGCCCGGGACATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCGCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAACCCCTACAACCGGCAGaa < 1:319664/229‑1 (MQ=255) tACCCTTACCTTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGGGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAACCCCTACAACCGGCAGAATACCGCt < 1:774192/238‑1 (MQ=255) | AGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTG‑CCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAACCCCTACAACCGGCAGAATACCGCT > NC_000913/664874‑665338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |