| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,029,277 | C→T | 14.0% | A30A (GCG→GCA) | yedI ← | DUF808 family inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,029,277 | 0 | C | T | 14.0% | 171.1 / 2.8 | 74 | A30A (GCG→GCA) | yedI | DUF808 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (7/55); new base T (9/2); total (16/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.26e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACTTTCTCTACTCCTTCAAAGCAGAGAAACGCGCCACCAATCATCAACAGAGGCGTAATCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACGGCAGCTCTGATACTTGCTTCACAGGTCAACATTTTTTTAACAATCAAGTGCAATTATATCTCTCGCCAGCAGAATGATTTTCACGTTTACTATGAAC > NC_000913/2029044‑2029510 | aCTTTCTCTACTCCTTCAAAGCAGAGAAACGCGCCACCAATCATCAACAGAGGCGTAATCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAAAACACCGGCGGG‑TTTTCTTcccc > 2:510411/1‑238 (MQ=255) tctcTACTCCTTCAAAGCAGAGAAACGCGCCACCAATCATCAACAGAGGCGTAATCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTTTTCgccgccc > 1:772421/1‑236 (MQ=255) tctcTACTCCATCAAAGCAAAGAAACGCCCCACCAACCAGCAACAGGGGCGTAATCGCCCACGGGATGAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCCCTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCGGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGt < 2:151440/239‑1 (MQ=255) aCTCCTTCAAAGCAGAGAAACGCGCCACCAATCATCAACAGAGGCGTAATCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑GTTTTTTTgcccccccgtttc > 1:604781/1‑231 (MQ=255) aCTCCTTCAAAGCAGAGAAACGCGCCACCAATCAGCAACAGAGGCGTAATCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGcc < 1:266104/239‑1 (MQ=255) ccTTCAAAGCAGAGAAACGCGCCACCAATCATCAACAGAGGCGTAATCGCCCACGGGATAAACGCACTGATGATCAGCGCAAGCGGCACCAGAATCACTTTATTAATAAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGGTAAGTCATCCCCTAATACACCGGC‑GG‑TTTTTTTTCCCCCCAGATTTcccc > 1:730457/1‑237 (MQ=255) tCAAAGCAGAGAAACGCGCCACCAATCATCAACAGAGGCGTAATCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GGCTTTTTTTTCCCGCC‑GTTTGTCCCT‑Ca > 1:783697/1‑238 (MQ=255) cAAAGCAGAGAAACGCGCCACCAATCATCAACAGAGGCGTAATCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAATCTTGTTGCGCATTGAGCGCTAAGTCATCCCCTAATACACCGGC‑GG‑TTTTTTTTTCCCCCCCTTTGTCCAtacac > 2:341737/1‑235 (MQ=255) cgagaAACGCGCCACCAACCCTCAACAGAGGCGTAATCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCCCTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ata < 1:454898/238‑1 (MQ=255) cgaaaaaCGCCCCACCAATCACCAACAGAGGCGTAATCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ata < 2:627825/235‑1 (MQ=255) agagAAACGCGCCACCAATCACCAACAGAGGCGTAATCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ata < 1:954704/239‑1 (MQ=255) gagaAACGCGCCACCAATCATCAACAGAGGCGTAATCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑GTTTCTTCGCGCCCCGCTTGCCCaccccccagaaa > 1:978792/1‑227 (MQ=255) gaAACGCGCCACCAATCATCAACAGAGGCGTAATCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ata < 1:199258/236‑1 (MQ=255) aaaaCGCGCCACCAATCATCAACAGAGGCGTAATCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ata < 1:65732/235‑1 (MQ=255) aaCGCGCCACCAATCACCAACAGAGGCGTAATCGCCCACGGGATAAACGCACTGATGACCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTc < 1:629115/239‑1 (MQ=255) aaCGCCCCCCCAATCTACAACAGAGGCGTAACCGCCCACGGGATAAACGCACGGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTCCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTc < 2:899975/239‑1 (MQ=255) cgcgCCACCAATCATCAACAGAGGCGTAATCGGCCACGGGATAAACGCCCTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCa < 1:623694/239‑1 (MQ=255) ccccccccaATCCTCAAACGGGGCGTAATCGCCCCCGGGAAAACCGCACTGATGATCAGCGCCAGCGGCCCCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCag < 2:467571/233‑1 (MQ=255) ccccacaATCAACAAACGTGGCGTAATCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCagta < 1:239108/234‑1 (MQ=255) caccaATCATCAACAGAGGCGTAATCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCagtagt < 2:171333/239‑1 (MQ=255) ccaACCATCACCGGGGGCGTAAACCCCCCCTGGATAAACGCCCTGAAGAGCAGCGCCAGCGGCACCAGAGTCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAgtgt < 2:978792/239‑1 (MQ=255) cAGAGGCGTAATCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTTTTTCTCGCCAGTTTTCCCCA‑CACGGAGTAAATC‑TCCAGTAGGGTgggcgtatctc > 1:312049/1‑230 (MQ=255) agGCGTAATCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTTTTTGCCCCCCGGTTGCCCATCCCCGGAG‑A‑ATCGTCCCGTAATGGTGCGGTATCCTCgg > 1:144947/1‑238 (MQ=255) agGCGTAATCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTTTCCGCCAGTTTTCCCCC‑CACGCAG‑AGATCGTCCCCAGGGGTGGCGGTATCATCgg > 1:24949/1‑238 (MQ=255) tAATCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTTTTCGCCCCCCGGTTGCCCCT‑CACCGAG‑ATATCGTCCCGTAGGGTGGCGATattatcccagca > 1:621661/1‑232 (MQ=255) aaTCGCCCCCGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AAc < 1:510411/238‑1 (MQ=255) acccccccCGGGAAAACCGCACTGGGGACCAGCGCCAGCGGCCCCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGt < 2:978011/235‑1 (MQ=255) aacccccACGGGAAAAACCCCCTTAAGAACCGCCCCAGCGGCCCCAGAATCCCTTTATTAATCAGCGACCCTTTCGCCACGCCCCAGCCCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGt < 2:604781/235‑1 (MQ=255) aTCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑GTTTTTTTGCTCCCCGTTTGCCCCT‑CACCCAC‑ATATTATCCCGTCGTGTGGGGGTTTCATCGAGC‑ACCg > 2:621972/1‑238 (MQ=255) cGCCTATGGGATAAACGCAGCTATGTTCCGGCCCCGCGGCAACAGAAGCCCCTTAACAGACAGCCTTCCTTTCGCCACGCCCCAGGCCACGGGAAGTTCCCGGTGGGCCCGCACGGCGGAACCTTGTTGCGCCTTGAGAGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTGCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTATTGTGGCGATATCATCGAGC‑AACGTCa < 2:730457/239‑1 (MQ=255) cccccggggATAAACCCCCTGATGGTCCGCGCCGGCGGCACCAGAATCCCTTTATTAATCGGCGCGCCGTCGCCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAg < 2:382792/233‑1 (MQ=255) aaccgcccggattatCAGCGCCAGCGGCACCAGAATCCCTTTATTAATCAGCGACCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTc < 2:56581/229‑1 (MQ=255) ggtttacccgcgcCAGCGGCCCCAAAATCACTTTATTAATCAGCGATCCCTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑aaa < 2:807538/230‑1 (MQ=255) atCAGCCCCCGCGGCACCATAACTCTTTTATTAATCCGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCAt < 1:355025/239‑1 (MQ=255) cgcCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTTCCCCT‑CACCGGG‑ATATCGTCCAGTCGTGTGGGGGGATCATCGAGC‑AACGTCCGTAAAAACCTCCCCGCC‑caaaaaatttcc > 1:847166/1‑230 (MQ=255) gcCAGCGGCACCAGAATCACTTTATTAAGCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGGGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCct < 1:1066159/238‑1 (MQ=255) gcCAGCGGAACCAGAATCACTTTATTAATCAGCGATCATTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCct < 1:621972/238‑1 (MQ=255) ccccgCGGCACCAGAATTCTTTTATTAATCAGCGATCCTCTCGCCACGCCCCAGACCCCGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGAAAAGTCATCCCCGAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGGTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTcc < 2:277416/232‑1 (MQ=255) ccAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTTTTCGCCTCCAGATTTCCCAT‑CACGGAG‑ATATCGTCCAGTATTGTGGGCATATCATCGTGC‑AACGCCACGAAACTAATCCCCGCC‑CAAAGAAATCCatc > 2:125614/1‑238 (MQ=255) cccaacaTCACGTTATTAATCACGGATCCGTTCGCCCACCCCCAGACCCCGGGAATTTCCCGGTTGGCCCGCACGCCTGAACCTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTa < 2:844720/233‑1 (MQ=255) aCCAGAATCCCTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTa < 1:745866/239‑1 (MQ=255) tcccTTTATTAATCACCGTTCCTTTCCCCACGCCCCAGACCCCGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCGAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGa < 2:504417/236‑1 (MQ=255) tccTTTTTTAATCCGCCATCCTTTCCCCACGCCCCAGACCCCGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGaa < 2:847166/237‑1 (MQ=255) ctcTTTTTTAATCAGCGGTCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGaa < 2:144947/237‑1 (MQ=255) ctcTTTTTTAACCCGCGTCCCTTTCCCCCCCCCCCAGACCCCGGGAAGTGCCCGGTTGGCCCGCACCCCTGAAACTTGTTGCGCATTGAGCCATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGaa < 2:117558/237‑1 (MQ=255) ccttttATTAACCAGGGACCCTTCCGCCCCGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGaa < 2:569806/236‑1 (MQ=255) cccTTTTTTAATCAGCGGTCCTTTCGCCCCGCCCCAGACCCCGGGAAGTTCCCGGTTGGCCCGCACGCCGGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGaa < 2:947390/237‑1 (MQ=255) cccTTTAATAACGAGCGATCCCTTCGCCACGCCCCAGACCCCGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATCCACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAAC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGaa < 1:1088704/237‑1 (MQ=255) ccatttATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGaa < 1:967185/236‑1 (MQ=255) cACTTTTTTAATCCGCGCTCCTTTCGCCCCGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGaa < 2:24949/239‑1 (MQ=255) aCTTTATTAATCAGGCATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAg < 1:1009095/239‑1 (MQ=255) ttaATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTTTCCGCCCGTTTGCCCAT‑CACGGAG‑ATATCGCGCAGTAGTATGGCGCTATCATCGCGC‑AACACGCGTAAAATTATCCCCGCCAAAAAAAATCCCCCCCCCTTTTTTTTTTTGAAggggta > 2:373367/1‑236 (MQ=255) aGCGATCCTTTCGCCAAGCCCTAGACCTCGGGAAGTTACCGGTTGGCCCGCACGCCTGAAACGTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCTGC‑GG‑TTTTCTTAGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCct < 1:41727/208‑1 (MQ=255) cccccccccCGACCCCGGGAAGTTCCCTGTTGGCCCGCACGCCGTAAACGTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACCCCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACGGc < 2:542246/234‑1 (MQ=255) caggCCCCAGACCACGGGAAGGTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACgg < 1:38726/234‑1 (MQ=255) gCCCCAGGCCACGGGAAGTTCCCGGTTGCCCCGGATCCCTGAAACTTGGTGCGCATTGAGCGATAAGTCATCCCCTAATGCTCCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CTCGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACGGCAGct < 1:280987/239‑1 (MQ=255) cGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTTTTCGGCGCCCGCTTGGCCAT‑CCCCGAG‑GCATTGTCCAGTAGTGTGGCGGTATCATCCGGC‑AACCCCCACAAAACACTCCCCCCC‑ACCAACATTTCCCCCCCTTTTTTTTTTTTTAGGGGGTAAGGATGAAGCAAAAACACCAGCACTgtcaaatt > 2:38726/1‑231 (MQ=255) gggAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTTTTCTCCGCCCGGTTGCCCAT‑CCCCGGG‑ATATCGTCCCCGAGGGTGGGGAGATCATCCCGCAAACCGCGGAAAAC‑AATCCCCGCC‑CAAAGAATTCCCCTCCATTTTTTTTTTTTTAGGGGGTGAGGATAAAGAAAAAAAAGCAGCTCTGAttaatttt > 2:275357/1‑232 (MQ=255) aGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATTCACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACGGCAGCTCTGATACTTGCTTca < 1:837068/238‑1 (MQ=255) tggtcTGAACTTTGTTGCGCAATGAGCGTTAAGTCATCCCCTAATACCCCGGC‑GG‑TTTTCGTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACGGCAGCTCTGATACTTGCTTCACAGGTCAACATTTTTTTaa < 1:327615/235‑1 (MQ=255) aCGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACGGCAGCTCTGATACTTGCTTCACAGGTCAACATTTTTTTaa < 1:373367/239‑1 (MQ=255) tGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACGGCAGCTCTGATACTTGCTTCACAGGTCAACATTTTTTTAACAATc < 1:275357/239‑1 (MQ=255) atcTTGTTGCCCATTGAGCGATAAGTCATCCCCTAATACCCCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACGGCAGCTCTGATACTTGCTTCACAGGTCAACATTTTTTTAACAATCAAg < 1:341737/237‑1 (MQ=255) aCTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCAtttt < 1:685693/156‑1 (MQ=255) ttttttgGGCATTGGGGGTTAAGTCACCCCCGAAAACCCCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AATGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACGGCAGCTCTGATACTTGCTTCACAGGTCAACATTTTTTTAACAATCAAGTg < 2:493176/235‑1 (MQ=255) ctgtttgCGCATTGGGGGATAAGTCTCCCCCAAAGACCCCGGC‑GT‑TTTTCTTCGCCGCCAGTTGGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACGGCAGCTCTGATACTTGCTTCACAGGTCAACATTTTTTTAACAATCAAGTg < 2:783697/235‑1 (MQ=255) agtcccccccTAATTCCCCGGC‑GT‑TTTTTTTTGCCGCCCGTTTGCCCAT‑CACGGAG‑ATTACGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACGGCAGCTCTGATACTTGCTTCACAGGTCAACATTTTTTTAACAATCAAGTGCAATTATATCTCTCGCcagca < 2:379924/233‑1 (MQ=255) ccTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGgtgt < 1:266407/142‑1 (MQ=255) tAATCCCCCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACGGCAGCTCTGATACTTGCTTCACAGGTCAACATTTTTTTAACAATCAAGTGCAATTATATCTCTCGCCAGCAGAATGAtttt < 2:772421/239‑1 (MQ=255) cacCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACGGCAGCTCTGATACTTGCTTCACAGGTCAACATTTTTTTAACAATCAAGTGCAATTATATCTCTCGCCAGCAGAATGATTTTCACGt < 1:775924/239‑1 (MQ=255) cccGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CCCGGAG‑AATTCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACGGCAGCTCTGATACTTGCTTCACAGGTCAACATTTTTTTAACAATCAAGTGCAATTATATCTCTCGCCAGCAGAATGATTTTCACGtt < 2:401108/238‑1 (MQ=255) ccGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACGGCAGCTCTGATACTTGCTTCACAGGTCAACATTTTTTTAACAATCAAg < 1:229069/199‑1 (MQ=255) cggc‑gg‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACGGCAGCTCTGATACTTGCTTCACAGGTCAACATTTTTTTAACAATCAAGTGCAATTATATCTCTCGCCAGCAGAATGATTTTCACGTTTa < 1:125614/239‑1 (MQ=255) gggg‑TTTTCTTTGGCGCCAGTTTGCCCAT‑CCCGGAG‑ATATCGTCCAGTAGGGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACGGCAGCTCTGATACTTGCTTCACAGGTCAACATTTTTTTAACAATCAAGTGCAATTATATCTCTCGCCAGCAGAATGATTTTCACGTTTACt < 2:621661/237‑1 (MQ=255) tttCCTCGCCGCCAGTTTGCCCAT‑CCCGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACGGCAGCTCTGATACTTGCTTCACAGGTCAACATTTTTTTAACAATCAAGTGCAATTATATCTCTCGCCAGCAGAATGATTTTCACGTTTACTATGaa < 1:96335/239‑1 (MQ=255) ttcttcGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACGGCAGCTCTGATACTTGCTTCACAGGTCAACATTTTTTTAACAATCAAGTGCAATTATATCTCTCGCCAGCAGAATGATTTTCACGTTTACTATGAac < 1:332489/239‑1 (MQ=255) | ACTTTCTCTACTCCTTCAAAGCAGAGAAACGCGCCACCAATCATCAACAGAGGCGTAATCGCCCACGGGATAAACGCACTGATGATCAGCGCCAGCGGCACCAGAATCACTTTATTAATCAGCGATCCTTTCGCCACGCCCCAGACCACGGGAAGTTCCCGGTTGGCCCGCACGCCTGAAACTTGTTGCGCATTGAGCGATAAGTCATCCCCTAATACACCGGC‑GG‑TTTTCTTCGCCGCCAGTTTGCCCAT‑CACGGAG‑ATATCGTCCAGTAGTGTGGCGATATCATCGAGC‑AACGTCAGTAAACTACTCCCGGCC‑AAAAGCATTCCCTCTCATTTTTATTGTTGAAGGGTGTAAGTATGAAGCAAAAACGGCAGCTCTGATACTTGCTTCACAGGTCAACATTTTTTTAACAATCAAGTGCAATTATATCTCTCGCCAGCAGAATGATTTTCACGTTTACTATGAAC > NC_000913/2029044‑2029510 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |