| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,274,349 | T→G | 26.1% | G57G (GGT→GGG) | yejB → | microcin C ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,274,349 | 0 | T | G | 26.1% | 122.7 / 14.4 | 75 | G57G (GGT→GGG) | yejB | microcin C ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base T (15/38); new base G (20/2); total (35/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.31e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
TACCTGGTGGTATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGCCGGTTTCC > NC_000913/2274115‑2274586 | acccTGGGGGTAGGACGTCAATAAAGCGGCCAACCGGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGtt < 1:643300/236‑1 (MQ=255) tggtggTATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGGATTACCCGGCGCAGGCGGTGAAGGGGtttggtc > 1:535882/1‑234 (MQ=255) gtggtATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGGGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGGGAAGGGTTTCGTgcc > 1:934641/1‑238 (MQ=255) gtggtATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGGTTTACCCGGCGCAGCCGGGGAAAGGGTTCGGgcga > 2:261104/1‑237 (MQ=255) tATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGCCCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGGGTATTACCCGGCCCGGGGGGGGAAGGGGTTCGGggcagccc > 2:284657/1‑238 (MQ=255) tATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGGATTACCCGGCGCAGGCGGGGAAGGGTGTCGGgccaccca > 1:319779/1‑239 (MQ=255) tGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTAAGTTTGGGATTGCCGGGGAATTACCCGGCGCAGGCGGTGAAGGGGTTCGGgcccgccagg > 2:570086/1‑237 (MQ=255) gTCAATAAAGCTGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGCAATGCCGGGGTATTACCCGGCGCAGGCGGTGAAGGGTGTCGTgcccggcacgacca > 1:480170/1‑228 (MQ=255) gTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGTTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAAGGCCGGAGAATTACCCGGGGCAGGCGGTGAAGGGGTGCGTGCCAGCCATGCGCa > 1:118184/1‑239 (MQ=255) gTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGCGTATTACCCGGCGCAGGCGGGGAAGGGGTTTGGGCCCGCCATggcca > 1:369472/1‑235 (MQ=255) gTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCa > 1:190821/1‑239 (MQ=255) aTAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCCCAGGCGGTGAAGGTGTTCGGGCCAGCCATGCGCaaaag > 1:683531/1‑237 (MQ=255) gCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGCCCGGACCAAACGGgggtat > 1:719339/1‑236 (MQ=255) gCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGCCGCAGGCGGGGAAGGGGTTCGTTCCAGCCATGACCAAACGGGTGTCg > 1:512385/1‑238 (MQ=255) ccAAACTACCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGAggcggc > 1:337722/1‑239 (MQ=255) cGTCCGCCAGCAAACGGGGGGAGTAGTTGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACTTTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAg < 2:512385/238‑1 (MQ=255) cccccggCAAAGGGGGAGTGGAGATGGGCGCTTACCTGATTCGCGGTCTGGTGCGGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTGCATCGTGCAAATGGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGAc < 2:727503/233‑1 (MQ=255) ccGCCAGCAAACAGGGGGGTGAGATGGGCGTTTACCTGATTCGCCTTCTGTTTCTGGGCGTCCCAACCTTATGGGCGATTATCCCCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGGGGTCCGGTCGACCAGGCCACCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGAc < 2:49215/239‑1 (MQ=255) ccGCCAGCAAACAGGGAAAGTAGAGTGGCTCTTACCTGATTCGCCGTCTTTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGa < 1:78684/238‑1 (MQ=255) ggAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCCGGCGGTGAAGGGGTTCGGTCCAGCCATGCGCCAACGGGGGGTGGCAAAATCACGGACAGGAATTTCCGTgg > 1:1011819/1‑239 (MQ=255) agagTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGGGTATTACCCGGCGCAGGCGGGGAAGGGGTTCTGGCCAGCCCTGCGCAAAAGGGGGTGGGCCATATCAGGGACAGTAATTTCCATGGCg > 1:70584/1‑239 (MQ=255) gagTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGCCATGCGCAAACGGGGGTCGGCAATTTCAGCGCCAGTAATTACCATGGCgg > 1:640738/1‑239 (MQ=255) ggATGGGGGCTTCCCTTATCCCCCGTCTGTTGTGTGTGATCCCAACATTGGGGGCGATTACCCCCATCAAC‑TTTTTCATCGTGCAAATGGCGCCTGGCGGTCCGGTCGCCCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGAcg < 2:735191/237‑1 (MQ=255) atgtGGGCTTTTACCTGATTCGCCTTCTGTTGCTGGGTACCCCAAAATTAGGGGCGATTTCCACCATCAAC‑TTTTTCCTCGTGCAAATTGCGCCTGGGGGGCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGAcg < 2:169632/235‑1 (MQ=255) gATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGCGTATTACCCGGCGCAGGCGGGGAAGGGGTTCGGGGCCGCCCTGCGCAAACGGGGGTCGGCAATATCAGGGACGGGAATTACCCTGGCGGAagcg > 1:488522/1‑239 (MQ=255) gATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGCCCTGGGCAAACGGGGGTCGGCAAAATAAGCGACAGTAATTACCGgggggggacgg > 2:927980/1‑234 (MQ=255) tGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGGAGGTGTTCGTGCCAGCCATGGGCAACCGGGTGGCGGCAATATTAGCGCCAGGAATTTCCGGCGCGGAcggcgg > 1:400046/1‑235 (MQ=255) gggctttACCTGTTTCGCCTTTTGTTGCTGGTGACCCCAACATTAGGGGCGATTACCCCCATCAAC‑TTTTTCAGCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGAtt < 2:934641/234‑1 (MQ=255) gcccTTACCGGATTCCGCGTCTGGTGGTGGGGATCCCAACATTATGGGCGATTATCACCAGCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGAtt < 1:992711/235‑1 (MQ=255) cgcTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACCGGTGTCGGGAATATACACGACAGGAATTACCGTGGGGGGCCCgggatag > 2:49567/1‑234 (MQ=255) cTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGGCAGTAATTACCGGGGGGGACGCGGGTTTGa > 1:735191/1‑238 (MQ=255) tCGCCTTCTGTTGCGGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGa < 1:284657/239‑1 (MQ=255) cgggtttgttgttgtGGATCCCAACATT‑TGGGGGGTTTTACCCCACAACTTTTTTCACGGGGAAATTTGCGCCGGGGGGTCCGGTCGCCCGGGCCAGCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATc < 2:1064000/233‑1 (MQ=255) ttttttttcTGTTGATCCCAAAATTAGGGGCGATTACCCCCATCAAC‑TTTTTCATCGTGCAAATTGGGCCTGGCGGCCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCt < 2:190821/231‑1 (MQ=255) gttgtgttttGGTGATCCCAACTTTATGGGCGATTATCCCCATCACC‑TTTGTCATCGTGAAAATTGCGCCTGGGGGTCCGGTCGGCCCGGCCAGCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCt < 2:480170/230‑1 (MQ=255) gTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTAACGTGGCGGACGCGGGTTCGAGTCAGAAGGGATcccgtggataa > 1:1064000/1‑225 (MQ=255) ccgaaCATTATGGGCGATTATCTCCATCAAC‑TTTTTCTTCGTGCAAATTGCGCCTGGCGGTCCGGCCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAACGTGTTCGTGCCATCCATGCGCAAACGGGTGTCGGCAATATCAg < 1:359259/171‑1 (MQ=255) ccAACATTATGGGCGTATATCCCCATCAAC‑TTTTTCCTCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTa < 1:105652/239‑1 (MQ=255) tGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATAAGCGCCAGTAATTACCGGGGCGGACCCGGGTTAGATCCAGAAGGGATCGGTTGGATCCACCAACGCTACGGGTTTgg > 1:1023512/1‑238 (MQ=255) tcttttccccATAAAT‑TTTTTCATCTGGAAAATGGGGCCGGGCGGTCCGTGCGCCCGGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAg < 2:932694/230‑1 (MQ=255) gATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCg > 1:197081/1‑161 (MQ=255) gATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCg < 2:197081/161‑1 (MQ=255) c‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGa < 1:465087/147‑1 (MQ=255) ttttcgagcGTGCAATTGGGGCGTGGCGGTCCGGGCGACCCGGCCATGGCCGACTTTGAGTTTGGTAATGCCGGAGTATTACCCGGCCCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTa < 2:10668/231‑1 (MQ=255) gTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGGTTAGATCCAGAAGGGATCGCTGAGATCCCTCATCGCTACCGGTTTTATAAGCCG‑ATCCACGAACGTTACTTCaaaa > 1:847846/1‑238 (MQ=255) tGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCCAACGGGTGTCGGCAATATCAGCGGCCGTAATTAACGGGGCGGGCGGCGGTTAGATCCAGAAGGGATACCTGTGATACCCCCTCCCTACGGGTTTTATAAACCGCATCC‑CGCACGTTTCTTCaaaaa > 2:245730/1‑237 (MQ=255) aaTTGCGGCTGGGGTTCCGTTCGACCGGGTACGCGCCGCCATGGAGTTTGGTAATGCCGGAGGATTGCCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGctct < 2:734814/239‑1 (MQ=255) aaTTGCGCCTGGCGGGCCGGTCGACCAGGCATTCCGCGGCATTGAGTTGGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTTAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGctc < 1:898633/238‑1 (MQ=255) aaTTCCGCCTGGCGGTCCGGTTGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGAAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGctct < 1:808671/239‑1 (MQ=255) aaTGGCGCCTGGCGGTCCGGGCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGctct < 1:334780/239‑1 (MQ=255) cggtccggtcGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGATTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATc < 1:880054/238‑1 (MQ=255) tccATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCg < 1:458332/237‑1 (MQ=255) cttccccgccATGGGGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGGGGTTAAGGGGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACCATAATTACCGTTGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTGGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATa < 2:1009381/234‑1 (MQ=255) aagcgccgcCATTGAGTTTGGTAATGCCGGATTATGACCCGGCGCAGGCGGTGAAGGTGTTCTTGCCCGCCATGCGCAAACGGGTTGCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTGTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATa < 1:902679/236‑1 (MQ=255) ccATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAGACGGGGGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAAAAGTGATCGCTGAGATCACTCATCGCTACGGGTTTGTTAAGCCG‑ATCCACGAACGGTACTTCCAAATGCTCTGGGACTCCATCCCCTTTGATTTTGGCGATAGCCTGtt > 2:421883/1‑238 (MQ=255) tGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCCAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCCCa > 1:921623/1‑239 (MQ=255) gtggTTTTGTAATGGCGGAGTATTTCCCGGCGCAGGCGGTGAAGGTGTGCGGTCCCGCCATGCGCAAAAGGGTGACGGCAATATCAGGGACAGTAATTACCGTGGCGGACGCGGTTTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCa < 2:719339/236‑1 (MQ=255) gggTTTGGTAATGCCGGAGTTTTACCCGGCGCGGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAg < 2:488522/237‑1 (MQ=255) gAGTTTGGTTATGCCGGGGTATTACCCGGCGCGGGCGGTTAAGGTGTTCGGGCCAGCCATGCGCAAACGGGTGTCGGCAATAGCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAg < 2:319779/239‑1 (MQ=255) tGGTAATGGCGGAGTATTTCCCGGGGGAGGCGGTTAAGGGGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGGAATATCAGCGACAGTAATTGCCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCt < 1:582097/239‑1 (MQ=255) gggttttACCCGGGGCCGGGGGTGAAGGTGTGCGTGCCCGCCGTGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACg < 2:650862/234‑1 (MQ=255) gAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACCGTAATTACCGTGGCGGACGCGGGTTTGGTCCAGAAGGGATCGCTGGGATCACTCATCGCTACGGGTTTGATAAGCCG‑ATCCACGAACCGTACCTCAAAATGCTCTGGGGCTAAATCCGCCTTTGTTTTGGCGCTGACCTGTTTTCCAGGGCCCCGGGGCTggc > 2:135032/1‑236 (MQ=255) aGTATTCCCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACg < 1:611198/158‑1 (MQ=255) aGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAACGACACGGTGCTGAc > 1:373009/1‑237 (MQ=255) gttttccccGGGGCGGGGGGTGAAGGTGTTCGGGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc < 2:746617/232‑1 (MQ=255) gTATTTCCCGGCGCAGGCGGTGAAGGTGTTCGGGCCAGGCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc < 1:570086/238‑1 (MQ=255) gTATTACCCGGCGCCGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc < 1:809064/238‑1 (MQ=255) tACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGa > 2:471596/1‑67 (MQ=255) tACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGa < 1:471596/67‑1 (MQ=255) cgcAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGGGGCGGACGCGGATTAGATCCAGAAGGGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGGGATAGCCCGTTTTGCAGGGCCCCGGGGCGGACGCTGATTTAAGACa > 1:144607/1‑239 (MQ=255) cgcAGGCGGTGAAGGGGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACCCGGGTTAGATCCAGAAGTGATCCCTGAGATCACCCATCGCTACGGGTTTGATAAGCCG‑ATCCACCAACGTTACTTCAAAATGCCCTTGGACTAACTCCGCTTTGTTTTTTGCGGAAGCCCGTTTTCCACGGCCCCGGTGCTGACGCCGTTTaaaaaaa > 2:72009/1‑235 (MQ=255) cgcAGGCGGAGAAGGGGGTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGCCGCGGATTAGATCCAGAAGTGATCGCTGAGATTCATCAACGCTACGGTTTTGAAAAACCG‑AATCACGAACCGTACTTCAAAAAGCGTTTGGACTACACCCGCCTTGATTTTTGTGATAAACCGTTTCTCGCGGCCCCCGTGCTGAGGCTGATTAAAAACa > 2:834264/1‑239 (MQ=255) cGGGGAAGGTGTTCGTGCCAGCCCTGCCCAAACGGATTTCGGCAATATCAGCGACAGTAATTACCGGGGCGGACGCGGATTAGAGCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTg < 2:369472/238‑1 (MQ=255) ggTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGc < 1:730400/238‑1 (MQ=255) tGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGCCg < 1:772572/238‑1 (MQ=255) tgtTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGCCGGTTTcc > 1:85701/1‑238 (MQ=255) | TACCTGGTGGTATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGCCGGTTTCC > NC_000913/2274115‑2274586 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |