| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,107,795 | A→C | 21.4% | V454G (GTG→GGG) | speC ← | ornithine decarboxylase, constitutive |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,107,795 | 0 | A | C | 21.4% | 84.8 / 4.0 | 54 | V454G (GTG→GGG) | speC | ornithine decarboxylase, constitutive |
| Reads supporting (aligned to +/- strand): ref base A (20/19); new base C (3/11); total (23/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.61e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AAACAGAATGGAGTTGAGAT‑CGCACTTCTCCGGCACAATGCCGTTCTCACGCAGATAGTGCGCCAGAATCGTCGCCGGAACGCCAAAGTCGCTATATTCGCCGGTTTCGGCATCGATACCTGGTGTAGTGAGTAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACGCCCACTCTCCCCTTCATGAA‑TTTTGGCGTTAACATCCA‑GTGCAGCAAACAGCGGATAGAAAGGGCTGGTAGAAGCATGGA > NC_000913/3107557‑3108008 | aaaCAGAAGGGGGTTGGGATGCGC‑TTTCTTCGGGGCAATGCCGTTCTGCCGGCGGTGGTGCGCCAGAATCGGCGGCGGAAGGCCAAAGTCGCTATATTCGCCGGGTTCGGCATCGATACCTGGTGTAGTGAGTAACTGCTTGCACGGATCAACAAAATACTGATCCGCGGCATGTCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAaca < 2:79985/239‑1 (MQ=255) aaTGGAGTTGAGAT‑CGCACTTCTCCGGCACAATGCCGTTCTCACGCAGATAGTGCGCCAGAATCGTCGCCGGAACGCCAAAGTCGCTATATTCGCCGGTTTCGGCATCGATACCTGGTGTAGTGAGTAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAacaccgga > 1:766398/1‑234 (MQ=255) aT‑CGCACTTCTCCGGCACAATGCCGTTCTCACGCAGATAGTGCGCCAGAATCGTCGCCGGAACGCCAAAGTCGCTATATTCGCCGGTTTCGGCATCGATACCTGGTGTAGTGAGTAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGCCGGTCGCT‑GGGTAACACTGATGTGGGGTAATccc > 1:397981/1‑238 (MQ=255) gCACTTCTCCGGCACAATGCCGTTCTCACGCAGATAGTGCGCCAGAATCGTCGCCGGAACGCCAAAGTCGCTATATTCGCCGGTTTCGGCATCGATACCTGGTGTAGTGAGTAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AACAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGGTAATCCTGc > 1:767621/1‑238 (MQ=255) gCACTTCTCCGGCACAATGCCGTTCTCACGCAGATAGTGCGCCAGAATCGTCGCCGGAACGCCAAAGTCGCTATATTCGCCGGTTTCGGCATCGATACCTGGTGTAGTGAGTAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑TGCGAACACTGATGTCGGATAATCCTGc > 1:294041/1‑238 (MQ=255) tGCCGTTCTCACGCAGATAGTGCGCCAGAATCGTCGCCGGAACGCCAAAGTCGCTATATTCGCCGGTTTCGGCATCGATACCTGGTGTAGTGAGTAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAACGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGCACGTCCCT‑TGCTAACACGTAAGTCCGTTATTCCTGCCCCACTTTGCCATcaaca > 1:497940/1‑239 (MQ=255) tGCCGTTCTCACGCAGATAGTGCGCCAGAATCGTCGCCGGAACGCCAAAGTCGCTATATTCGCCGGTTTCGGCATCGATACCTGGTGTAGTGAGTAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCCCCCCCGGCCCAAAACTG‑AAAAAACGGCGGGCCCC‑GGCCAAACCCTCTGTCGGGTAATCCTGCCACAAATTTCCacccaaa > 2:1072318/1‑233 (MQ=255) tcccACGCAGATAGTGCGCCAGAATCGTCGCCGGAACGCCAAAGTCGCTATATTCGCCGGTTTCGGCATCGATACCTGGTGTAGTGAGTAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAAcggg < 1:745743/235‑1 (MQ=255) ctcACGCAGATAGTGCGCCAGAATCGTCGCCGGAACGCCAAAGTCGCTATATTCGCCGGTTTCGGCATCGATACCTGGTGTAGTGAGTAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGCCGGTCGCT‑TGCTTACACTGATGTCGGATAATCCTGCCCCAATTTGCCATCAACAAcggggc > 1:1082218/1‑237 (MQ=255) agggcgcAAGAATCGGCGCCGGAACGCCAAAGTCGCTATATTCGCCGGTTTCGGCATCGATACCTGGTGTAGTGAGTAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACggg < 1:790283/236‑1 (MQ=255) aGTGCGCCAGAATCGTCGCCGGAACGCCAAAGTCGCTATATTCGCCGGTTTCGGCATCGATACCTGGTGTAGTGAGTAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGCCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCCCACTTTGCAATCAACAACGGGCGGGGTAAACcgg > 1:950915/1‑239 (MQ=255) ccAGAATGCTCGCCGGAACGCCAAAGTCGTTATTTTCCCCGGTTTCGGCATCGATCCCTGGTGTAGTGAGTAACAGCTTGCCCGGACCAACAAAATACTGACCCGCGGCATAGCCTTCAAAGCCGGGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAAc < 2:511701/239‑1 (MQ=255) tcgtcgCCGGAACGCCAAAGTCGCTATATTCGCCGGTTTCGGCATCGATACCTGGTGTAGTGAGTAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGCACCG‑GGCCAACACCGAGGTCGGGTAAACCTTCCCCAATTTTCCCCCAACAACCGCCGGGAGAAACGGGGGGaaaaactga > 2:934242/1‑232 (MQ=255) gCCGGAACGCCAAAGTCGCTATATTCGCCGGTTTCGGCATCGATACCTGGTGTAGTGAGTAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGAGAATCCTGCCCCAAATTGCCATCAACAACGGGCGGGGTAAACGGGCGGGAACGCTTAAAgc > 1:892711/1‑238 (MQ=255) gtttttttCGCCGGTTTCGGCAGTGGTCCCTGGTGTAGGGATTAACAGCTTGCCGGGATCAACAAAATACTGCTCCGCGGCATACCCGTCAACGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTgc < 2:791281/233‑1 (MQ=255) tataTTCGCCGGTTTCGGCATCGATACCTGGTGTAGGGAGTACCAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACCCTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTgcgc < 1:106632/239‑1 (MQ=255) tagatTCGCCGGTTTCGGCATCGATCCCTGGTGTAGGGAGTAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTgcg < 1:641629/235‑1 (MQ=255) ggttttCGGAGTCGTTTCCTGGGTTAGTGAGTAACGTGTTGCAGGGAACAACAAAATACTGGTCCGCGGCAAATCCTTAAAAGCCGGGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATc < 2:294041/236‑1 (MQ=255) tCGGCATCGATACCTGGTGTAGTGAGTAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAACTTACATCACGCAAAGAAAGCCTTTCGCGCTTCCAACCCTa > 1:908171/1‑238 (MQ=255) cGATACCTGGTGTAGTGAGTAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGACGCT‑GGCCAACACTGATGTCCGGAAATCCTGCCCCAAATTGCCCTCCAAAACGGGCGGGGTAAAAGGGCGGAACAACCTAACGCGCCCCAAAAAAACCTTTCGCGCTTCCATCCCAAttccacaa > 2:819351/1‑232 (MQ=255) gATGCCGGGTGTAGTGAGTAACAGCTTGCACGGATCAACAAAATACTGGTCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑Aacac < 1:696236/239‑1 (MQ=255) aCCTGGTGTAGTAAGTAACAGTTTGCACGGATCAACAAAATACTGGTCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCACGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACt < 1:209816/239‑1 (MQ=255) tAGTGAGTAACAGCTTGCACGGATCAACAAAATACTGAGCCGCGGATTATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTAAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCca < 1:230829/238‑1 (MQ=255) tGAGTAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGTGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTTCGCGCTTCAATCCCTATCTC‑CACACACCCGACCCACAg > 1:731461/1‑238 (MQ=255) gAGTAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGGCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑CACACACTCAGCCCACAccc > 1:258966/1‑239 (MQ=255) aGTAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAAACCTGTTGTCGGATAATCCTGCCACAATTTGCCCTCAACAACCGGCGGGATAAAAGGGCGGCACAGCTTAAAGCGCGCAAGAATAGCCCTGCCGCCCTCAATCCCCATCTC‑AAAACACCCAACCcaccacc > 2:662358/1‑234 (MQ=255) aGTAACAGCTTGCACGGAAAAACAAAATCCTGACCCGCGGCATACCCTTCAAAGCCGGGCCCCTTCGCCCCCGGCTCAAAACGG‑AAAAAACGGCGGTCGCT‑GGCTAACCCTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTa < 2:523852/214‑1 (MQ=255) tAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACCCTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGCGGGGGTAAACGGGCGGAACAGCTTACCACGCGCACGAAAAGCCCTGTGCGCCTCAACCCCCACCTCAAACACACCCACCCCACACCCg > 2:725771/1‑238 (MQ=255) tAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑Aac < 1:1025641/219‑1 (MQ=255) aCAGCTTGCCCGGAACAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGTGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACGc < 1:217448/239‑1 (MQ=255) cACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑CACACACTCAGCCCCCAGCCGCCCCCCCcttc > 1:974858/1‑236 (MQ=255) aCGGATCAACAAAATACTGATCCGCGGCATATCCCTCAAAGCCGTGCCACTTCGCCCCCGGCTAAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACGCCCACTCTcc < 1:387315/239‑1 (MQ=255) aacaaAAAACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACGCCCACTCTCCCCTTCAt < 1:1072318/239‑1 (MQ=255) caaAATACTGATCCGCGGGATATCCTTCAAAGCCGTGCCACTTCCCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACCCGGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACGcc < 1:977797/222‑1 (MQ=255) tACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGGTAAACGGGCGGAACAGCTTAAAGCGCGCAAGAAAAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACCCCCCCCCCCCCCCTCCTCAA‑tttt > 1:133068/1‑239 (MQ=255) tACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGAAAATCCTGCCACAATTTGGCATCAACAACGGGCGGGATAAACAGGCGGAACAGCTTACAGCCCGCCAGAATAGCCCTGCGCGCTTCAATCCCTCACCC‑AACACACCCAACCCCCAACCCACACCCCCCCCCCCCCTCCTGaaaatt > 2:629831/1‑235 (MQ=255) tGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACCGATGTCGGGTAATCCTGCCACCATTTGCCCTCAACAACGGGCCGGCTAAACGGGCGGAACACCCTACAACCCGCAAGAACACCCTTTCACGCTCCAACCCCTCTCTC‑AACCCACTCACCACCCACCCCGCGCCCCCCCCCCCCCTCATCAA‑tttttgg > 2:374554/1‑236 (MQ=255) gctCCGCGGCATATCCTGCAAAGCGGGGCCCCTTCCCCCCCGGCTAAAAACGG‑AAAAAACGGGGGGCGAT‑GGCTAAATCTGAGGGCGGATAAACCTGCCACAAGTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTGGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACGCCCACTCTCCCCTTCATGAA‑TTTTGGCg < 2:951100/237‑1 (MQ=255) gATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCCCAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAACTTACAGCGCGCAAAAAAAGCCCTGCGCGCTTCAATCCCTATCTC‑AACACACCCCGCCCCCACCCGCCCCCCCCTCCCCCCCTCACTAA‑TTTTgcgg > 2:747028/1‑236 (MQ=255) aTCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGCTAATCCTGCCACAATTTGCCATCAACAACGGGCGGGGTAAACGGGCGGAAAAGCTTACAGCCCGCCAGAAAAGCCTTGCGCGCTTCAAACCCCATCTC‑AACACACCCACCCCCCAGCCCACCCCCCCCCCCCCCCTCATAAA‑TTTTGGGGt > 2:543009/1‑239 (MQ=255) cgGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCACGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACGCCCACTCTCCCCTTCCTGAA‑TTTTTGCGTTAAc > 1:592863/1‑238 (MQ=255) caattCCTTCAAACCCGTGCCGCTTCGCCCCCGGCTCAAAACTA‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACGCCCACTCTCCCCTTCATGAA‑TTTTGGCGTTAACATc < 1:819351/234‑1 (MQ=255) cATATCCCTCAAAGCCGTGCCACTCCCCCCCCGGCCAAAAACTG‑AAAAACGGGCGGGCGCT‑GGCTAACACTGATGTCGGAAAACCCTGCCACAATTTGCCATCAAAAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACGCCCACTCTCCCCTTCATGAA‑TTTTGGCGTTAACATc < 2:1082218/238‑1 (MQ=255) ccTTCAAAGCCGTGCCACTTCGACCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGGT‑GGCTAACACTGAGGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACGCCCACTCTCCCCTTCATGAA‑TTTTGGCGTTAACATCCA‑GTgc < 1:374554/239‑1 (MQ=255) cTTCCAACCCGGCCCCCTTCCGCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GTCTAACCTTGATGTCGGAAAACCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACGCCCACTCTCCCCTTCATGAA‑TTTTGGCGTTAACATCCA‑GTgca < 2:767621/239‑1 (MQ=255) cTTCAAATCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACGCCCACTCTCCCCTTCATGAA‑TTTTGGCGTTAACATCCA‑GTgca < 1:320414/239‑1 (MQ=255) cgggCCACTTCGCCCCCGGCTAAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGGCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACGCCCACTCTCCCCTTCATGAA‑TTTTGGCGTTAACATCCA‑GTGCAGCAAACa < 1:975320/234‑1 (MQ=255) gCCACTTCGCCCCCGGCTCAAAACTG‑AAAAACCGGCGGTCGCT‑GGCTAACCCTGATGCCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACGCCCACTCTCCCCTTCATGAA‑TTTTGGCGTTAACATCCA‑GTGCAGCAAACAGCgg < 1:158314/238‑1 (MQ=255) cGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTTACACTGATGTCGGATAATCCTGCCACAATTTGCCCTCAACAACGGGCGGGATAAACGGGCGGAACAGCCTAAAGCCCGCCAAGATAGCCTTGCGCGCATCCATCCCCTTCTC‑CACACACTCAGCCCACAGCCTACCCCCACCGTTCCCCTCATTAATTTTTCGCGTT‑ACATACAGGTGCAGAAAACcgcgaaaaaaaa > 2:365524/1‑231 (MQ=255) ccccgGGCT‑AAAACTGAAAAAAACGGCGGCGGTG‑GGATAACCCGGAGGCCGGATAACCCTGCCAAAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAAACCCTATCTC‑AACACACTCAGCCCACAGCCGACGCCCACTCTCCCCTTCATGAA‑TTTTGGCGTTAACATCCA‑GTGCAGCAAACAGCGGATAGAAAggg < 2:133068/239‑1 (MQ=255) cccccGGTTCAAAACGA‑AAAAAACGGGGGT‑GCTGGGATAAACCGGATGGCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGATTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACGCCCACTCTCCCCTTCATGAA‑TTTTGGCGTTAACATCCA‑GTGCAGCAAACAGCGGATAGAAAggg < 2:1045789/239‑1 (MQ=255) cccccGGCTCAAAACTA‑AAAAACCGGCGGTCGCG‑GGCTAACCCGGAGTTCGGATAACCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACGCCCACTCTCCCCTTCATGAA‑TTTTGGCGTTAACATCCA‑GTGCAGCAAACAGCGGATAGAAAggg < 2:908171/239‑1 (MQ=255) ccccGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACCCTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACGCCCACTCTCCCCTTCATGAA‑TTTTGGCGTTAACATCCA‑GTGCAGCAAACAGCGGATAGAAAGGGc < 1:662358/239‑1 (MQ=255) aaCTG‑AAAAACCGGGGCGCGCT‑GGCAAACACGGATGTGGGGTAACCCTGCCACAATTTGCCATAAACAACGGGCGGGAAAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACGCCCACTCTCCCCTTCATGAA‑TTTTGGCGTTAACATCCA‑GTGCAGCAAACAGCGGATAGAAAGGGCTGGTAGAAGCa < 2:974858/239‑1 (MQ=255) accgcaaaaaaCGGCCGTCGCT‑GGTTAACCCGTTTGTAGGAAAGTCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTTGCTC‑AACCCACTCAGCCCACAGCCGACGCCCACTCTCCCCTTCATGAA‑TTTTGGCGTTAACATCCA‑GTGCAGCAAACAGCGGATAGAAAGGGCTGGTAGAAGCa < 2:497940/234‑1 (MQ=255) g‑AAAAAACGGCGGTCGCT‑GGCTAACCATGATGTCGGATAATCCTGCCACAATTTGCCATCAACCACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACGCCCACTCTCCCCTTCATGAA‑TTTTGGCGTTAACATCCA‑GTGCAGCAAACAGCGGATAGAAAGGGCTGGTAGAAGCATGGa < 1:629831/239‑1 (MQ=255) | AAACAGAATGGAGTTGAGAT‑CGCACTTCTCCGGCACAATGCCGTTCTCACGCAGATAGTGCGCCAGAATCGTCGCCGGAACGCCAAAGTCGCTATATTCGCCGGTTTCGGCATCGATACCTGGTGTAGTGAGTAACAGCTTGCACGGATCAACAAAATACTGATCCGCGGCATATCCTTCAAAGCCGTGCCACTTCGCCCCCGGCTCAAAACTG‑AAAAAACGGCGGTCGCT‑GGCTAACACTGATGTCGGATAATCCTGCCACAATTTGCCATCAACAACGGGCGGGATAAACGGGCGGAACAGCTTACAGCGCGCAAGAATAGCCTTGCGCGCTTCAATCCCTATCTC‑AACACACTCAGCCCACAGCCGACGCCCACTCTCCCCTTCATGAA‑TTTTGGCGTTAACATCCA‑GTGCAGCAAACAGCGGATAGAAAGGGCTGGTAGAAGCATGGA > NC_000913/3107557‑3108008 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |