| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,645 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001644 | 2 (0.030) | 42 (0.660) | 36/284 | 1.0 | 95.5% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001650 = | 2 (0.030) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
AGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTAT > NC_000913/4001503‑4001770 | aGTATGGGTTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGCCGACGGCCTGCATc < 1:410063‑M1/143‑2 (MQ=255) aTGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc < 1:878070‑M1/143‑5 (MQ=255) gATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCCGATGCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttc > 2:17898‑M1/1‑136 (MQ=255) gATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttc > 1:532202‑M1/1‑136 (MQ=255) tCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttc > 1:215246‑M1/1‑130 (MQ=255) tCTGGTGGAACCGGACGACGACGCGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttc < 1:222698‑M1/143‑14 (MQ=255) tggtcGAACCGTACGACGCCGAGCGCCTGCGCGTACAAGCTGAACTTTGCCAGAGCCTGGCACCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctt < 2:485760‑M1/141‑16 (MQ=255) gTCGAATCACACGACGACGAGCGACTGCTCGTACAATCTGAACTTGTCCATAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttg < 1:336622‑M1/143‑18 (MQ=255) tCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctctttcttcttctttga > 1:217558‑M1/1‑125 (MQ=255) tCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttga > 1:418098‑M1/1‑125 (MQ=255) gcgAGCCGGACGACGACGGGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACGGGAAGACAGCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttga < 2:1037688‑M1/142‑19 (MQ=255) gcgAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttga < 2:650826‑M1/142‑19 (MQ=255) gAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttctccttcctcgaag > 2:613102‑M1/1‑123 (MQ=255) ggcGACTGGGCGTACAAACTGACCTTGGGCAGAGCCGGGGAAGCCGCGCGGAACTGGAAGACATCGAAGCATCGGCAGGTTTCTTTGAAGACGACGACGGCCTGCATctccgtcttcttctttgaagatgcggaagatcacgc < 2:158480‑M1/142‑37 (MQ=255) ctgcggcgcgtacaATCTGAACTTGGCCAGGGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCTTCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcctgcttcttctttgaagatgcggaagatcacgccg < 2:440231‑M1/138‑39 (MQ=255) gACTGCGCGTACAATCTGAACCTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccgg < 2:983517‑M1/143‑40 (MQ=255) cgTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGCAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtcactcc > 1:218523‑M1/1‑97 (MQ=255) aCAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccact < 1:772332‑M1/143‑50 (MQ=255) aaTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgccgatgcggaagatcacgccgggaaccccactgt > 1:839782‑M1/1‑92 (MQ=255) agctgAACGTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcctcttctttgaagatgcggaagatcacgccggtaactccactgtg < 1:457799‑M1/141‑53 (MQ=255) cTGAACTTGGCCAGGGCCTGGCAACCCGCCCGGAACTGGAAGACAGCGAAGCATCGGCACGTTTCTTTGCAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggc < 2:46975‑M1/143‑55 (MQ=255) tGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttctcctttgaagatgcggaagatcacgccggtaactccactgtggca < 2:356471‑M1/143‑56 (MQ=255) tctcgcgcagggcctGGCACCCGGCCCGGAACCGGAAGACATCGAAGCATCGGCACG‑TTCTTTGGAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcattta < 2:796373‑M1/136‑60 (MQ=255) ttGGCTAGAGTCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttac < 2:301462‑M1/143‑61 (MQ=255) ccAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatc > 1:441725‑M1/1‑79 (MQ=255) gactcgcaaccCGCCCGGAACGGGAAGACATCGCAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATcaccttctgcttctttgaagatgcggaagatcacgccggtaacgccactgtggcatttaccatccgtga < 1:728178‑M1/138‑70 (MQ=255) ccTGGCAACCCGCCCGGAACTGGAAGACATAGAAGAATCGGCACTTTTCTTTGAAGACGACGACGGCCTGCATTTT‑‑‑‑‑CGTCGTCTTGGTTGAAGTTGCGGAAGATCACGCCGTGAACTCGACTGTGGCAGTTACTATCCGTGAt > 2:21175/1‑143 (MQ=255) cTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccacagtgccatttaccatccgtgatg < 2:414951‑M1/143‑72 (MQ=255) gCAACCCGCCCGGAACTGGAAGACATCGCAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATgtccttcttcttcttcgaagatgcggaagatcacgccggtaactccaccgtggcatgcaccaaccgcgatggcc > 2:811401‑M1/1‑69 (MQ=255) gccggcgggaacgggaATGCATCGAAGCCTCGGCACGTTTCTTTGACGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactctactgtggcatttaccatccgtgatggtcgtct < 2:44713‑M1/136‑79 (MQ=255) gcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtcttct > 1:1110882‑M1/1‑62 (MQ=255) gcaaGCCAGCGACGCGTCTGGACGTTTCGTGGAGGACGACGACGGCCTGCGT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGATGCTCACGCCGGTAACTCCACTGTGGCATTTACCAACCGTGATGGTCGTCTGTTGACTCTgcgt < 2:368956/141‑1 (MQ=255) aaGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggacgatcacgccggtaactccactgtggcatttaccattcgtgatggtcgtctgtttactctgcgtgagcgtgaact > 1:800359‑M1/1‑41 (MQ=255) aaGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaact < 2:418098‑M1/143‑103 (MQ=255) cGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgc > 1:313910‑M1/1‑35 (MQ=255) ggCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttgtttgaagatgcggaagatgacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgct > 1:825901‑M1/1‑34 (MQ=255) cACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttt > 2:396987‑M1/1‑32 (MQ=255) cACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccacagtggcatttaacatccgtgatggtcgtccgtttactctgcgtgagcgtgacctgcccactgt > 2:801893‑M1/1‑32 (MQ=255) tCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtct < 1:625891‑M1/143‑118 (MQ=255) tGAAGACGACGCCGGCCTGCCTctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtan < 2:592754‑M1/143‑122 (MQ=255) tGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtag > 1:686397‑M1/1‑22 (MQ=255) acgacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtacctccactgtggcatctaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtat < 1:901749‑M1/143‑127 (MQ=255) acgacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtac > 1:542577‑M1/1‑17 (MQ=255) acgacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgggaactgcccgcttttcgtccgtctggtac > 2:961511‑M1/1‑17 (MQ=255) | AGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTAT > NC_000913/4001503‑4001770 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |