New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4542690	48 (0.750)	4 (0.070)	4/266	9.0	6.8%	intergenic (+57/‑425)	fimE/fimA	tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
	?	NC_000913	= 4542986	65 (1.080)					intergenic (+353/‑129)	fimE/fimA	tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAA  >  NC_000913/4542844‑4543125                                                                                                                                               |                                                                                                                                            ggCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCaaaa                                                                                                                                             <  1:1105256/143‑1 (MQ=255)    tCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATgg                                                                                                                                          <  1:47563/143‑1 (MQ=255)    tCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATgg                                                                                                                                          <  1:47557/143‑1 (MQ=255)      gACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTACGAGTCAAAATGGcc                                                                                                                                        >  2:1095242/1‑143 (MQ=255)       aCGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGccc                                                                                                                                       >  2:618731/1‑143 (MQ=255)           aTCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCaaa                                                                                                                                   >  2:276602/1‑143 (MQ=255)                ccTCATTCTTGCATCCAAAAAACCACACATGCAATATAACCATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACCGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGttt                                                                                                                              <  2:128535/143‑1 (MQ=255)                ccTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGttt                                                                                                                              <  1:240472/143‑1 (MQ=255)                ccTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGttt                                                                                                                              <  1:471573/143‑1 (MQ=255)                  tCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCa                                                                                                                            >  1:935888/1‑143 (MQ=255)                  tCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGACAACAAATAAACTGAACAAGTTTGTCCGCGATGCTTTCCTCTATGGGTCACAATGGCCCCAAATGTTTCa                                                                                                                            >  1:91646/1‑143 (MQ=255)                  tCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCCATAAATAAAGATAACAATAGACTATTAACCCAACAAATAAACTGAAAAACTTTGTCCGCGATGCTTTCCTCTATGAGCCAAAATGGCCCCAAATGTTTCa                                                                                                                            >  1:1127389/1‑143 (MQ=255)                   cATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGCATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCTGCGCTGCTTTCCTCTATGAGTCAAAATAGCCCCAATTGtttaac                                                                                                                           >  2:1053371/1‑140 (MQ=255)                    ctccagctctcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATc                                                                                                                          <  1:255956/137‑1 (MQ=255)                     ctcttctCTCCAAAAACCACCTCATGCAATATAAAGATATATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTGTGTCCGCGATGCTTTCCGCTATGAGTCAAAATGGCCCCAAATGTTGCATCt                                                                                                                         <  1:338290/142‑1 (MQ=255)                        ttctCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGCTAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAACTGTTTCATCtttt                                                                                                                      >  2:824450/1‑143 (MQ=255)                        gtcactcCAAAAGCCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCtttt                                                                                                                      <  2:589597/139‑1 (MQ=255)                          ctctcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAATATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTgg                                                                                                                    <  1:368396/143‑1 (MQ=255)                          ctctcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTgg                                                                                                                    <  2:1032834/143‑1 (MQ=255)                          ctctcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCACGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTgg                                                                                                                    <  1:881646/143‑1 (MQ=255)                            ctcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTgggg                                                                                                                  >  2:414617/1‑143 (MQ=255)                             tcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTCTGAGTCAAAATGGCCCCAAATGTTTCATCTTTTggggg                                                                                                                 >  1:177892/1‑143 (MQ=255)                             tcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTggggg                                                                                                                 >  1:360996/1‑143 (MQ=255)                              ccAAAAACCGCCTCATGCAATATAAACATCTATAAATAAAGATAACACTGGAACATTAAGGCAACAAACAAACTGAAAAAGGTTGGCCGCGATGCTTTCCGCTATGAGTCAAAATGGTCCCAAATGTTTCATCTTTTGGGGGa                                                                                                                <  2:1073313/143‑1 (MQ=255)                               cAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCCTCTTTTgcgggtg                                                                                                               >  1:498608/1‑141 (MQ=255)                               cAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAAAAAAAAAAGATTGTGAGCGCTGCCAACCCCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGaa                                                                                                               >  2:1126123/1‑143 (MQ=255)                                 aaaaCCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGaaaa                                                                                                             >  1:1042807/1‑143 (MQ=255)                                     ccaccTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACtgt                                                                                                         >  2:775390/1‑143 (MQ=255)                                      caccTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTATGTTCAATGAGGCAAAAAGAACCCAAATGTTTCATCTTTTGGGAGTAAACtaag                                                                                                        >  2:1062630/1‑140 (MQ=255)                                      caccTCAGTCAATATAACCATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTTAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACtgtg                                                                                                        <  2:1125286/143‑1 (MQ=255)                                           cATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAgtg                                                                                                   >  1:362221/1‑143 (MQ=255)                                           cATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAgtg                                                                                                   <  1:950818/143‑1 (MQ=255)                                               cAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTgg                                                                                               <  1:851105/143‑1 (MQ=255)                                                   ataAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGACAAAATGGCCCCAGATGTATCATCTTTTGGGAGAAAGCTGTGCAGTGTTTGCAGt                                                                                           >  2:83312/1‑143 (MQ=255)                                                    taAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTc                                                                                          >  2:318629/1‑143 (MQ=255)                                                     aaaCATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCa                                                                                         >  2:948446/1‑143 (MQ=255)                                                      aaCATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCaa                                                                                        <  2:189801/143‑1 (MQ=255)                                                            tataAATAAAGATAACACTAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGt                                                                                  <  2:1141085/143‑1 (MQ=255)                                                            tataAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTCTGAGTAACCAGGGGCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGt                                                                                  >  1:1149565/1‑143 (MQ=255)                                                               aaattaaGACAACAATAGAAGATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCCTTCCTCTATTAGTCAAAATGGCCCCAAATGTTTCATCTTTTGTGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTa                                                                               <  2:81347/143‑1 (MQ=255)                                                                   aaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaa                                                                           <  1:618731/143‑1 (MQ=255)                                                                    aaGAAAACAATAGTATACTAAGCCAACAAAAATAAAATAAAAGCTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaa                                                                          <  2:238259/143‑1 (MQ=255)                                                                       aTAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaacaa                                                                       >  1:821980/1‑143 (MQ=255)                                                                         aaaaaTAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCTCCAAATCTTTCATCTTTTGAGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAg                                                                     <  2:630562/140‑1 (MQ=255)                                                                            aaTAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAACCTGTGCACTACCTTCAGTCACGCCAGTTTACAAAACAAAgtgt                                                                  <  2:828491/143‑1 (MQ=255)                                                                               aGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACa                                                               <  2:918851/143‑1 (MQ=255)                                                                                    atgaaGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACg                                                          <  1:234370/140‑1 (MQ=255)                                                                                     ttAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGa                                                         <  2:669105/143‑1 (MQ=255)                                                                                         gCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGc                                                     <  1:319989/143‑1 (MQ=255)                                                                                            aacaaATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAAGTGTGCAGTGTTGGCAGTCAAACTCGTTTCCAAAACAAAGTGTACAGAGAGACTGCCCa                                                  >  2:1125200/1‑143 (MQ=255)                                                                                            aacaaATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCa                                                  >  1:590008/1‑143 (MQ=255)                                                                                             acaaATAAACTGAAATAGTTTGTCATCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCAt                                                 <  2:498608/143‑1 (MQ=255)                                                                                                aaTAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCATTCAAACCCGTTTACAAAAGAAACTGTACAGAACGACTGCCAAGGTc                                              >  2:75032/1‑143 (MQ=255)                                                                                                           gaaGTTTGTCCGCGATGCTTTCCTCTATGAGTCATAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTCTCCTGTGTGTGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAAt                                   <  2:873620/142‑1 (MQ=255)                                                                                                            caGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATa                                  <  1:235544/142‑1 (MQ=255)                                                                                                            aaGTTTGTCCGCGATGCTTTCCTCAATGAGTCAAAATGGCCCCAAAAGTTTAATCATTTGGGGGAAAACTCCCCAGGATGTACATTTCAGCTACTAAACAAGACAAAGTGTACAGAACGACTGCCAATCACAATATAGAAGTa                                  >  2:11782/1‑143 (MQ=255)                                                                                                            aaGTGTGTCCGCGATGCTTTCCTCTCTGGGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATa                                  <  2:183838/143‑1 (MQ=255)                                                                                                               tttGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCGTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGAGCTACAagtagtc                               >  1:363398/1‑142 (MQ=255)                                                                                                               tttGTCCGCGATGCTTTCCTCTATGAATCAAAATTGCCCCAAATGTTTCATCTTTTGTGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtt                               <  2:881483/143‑1 (MQ=255)                                                                                                                   tCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtttttt                           >  2:278359/1‑143 (MQ=255)                                                                                                                       cgATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaa                       <  2:361957/143‑1 (MQ=255)                                                                                                                               tCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAATGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAagca               <  2:592749/143‑1 (MQ=255)                                                                                                                                 ctctATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAagcagc             <  1:276602/143‑1 (MQ=255)                                                                                                                                  tctATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGACCGACTGCCTATGCCCCTTTAGAAATAGTTTTTTCAAAGGAAAgcagca            >  2:929907/1‑143 (MQ=255)                                                                                                                                    tATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATg          >  1:330767/1‑143 (MQ=255)                                                                                                                                    tATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATg          >  2:684594/1‑143 (MQ=255)                                                                                                                                     aTGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACACAGTGTACAGCACGACTGCCCATGTCGATTTAGAAATAGATATATGAAAGGAAAGCAGCATGa         >  1:940094/1‑143 (MQ=255)                                                                                                                                        aGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGaaaa      >  1:474434/1‑143 (MQ=255)                                                                                                                                         gTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAAt     >  1:1067680/1‑143 (MQ=255)                                                                                                                                          tCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAAtt    >  2:468344/1‑143 (MQ=255)                                                                                                                                            aaaaTGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTaa  >  1:509166/1‑143 (MQ=255)                                                                                                                                               |                                                                                                                                            GGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAA  >  NC_000913/4542844‑4543125

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.