New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2219655 =	NA (NA)	6 (0.130)	5/268	6.1	NA	noncoding (31/34 nt)	REP152 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP152 (repetitive extragenic palindromic) element; contains 1 REP sequences
	?	NC_000913	= 4094717	NA (NA)					noncoding (402/402 nt)	REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences	REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences
Rejected: Coverage evenness skew score above cutoff.

GCGAATTAAGAGAAAAGCATAGTTGATAATGGCGGGGTTAGCTTGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGAATCAGTGCCGATAAAGACATTGAACTTGCCAGGCTCGGCGTCATATTTCATCTGTTGATTCCAGAAC  >  NC_000913/2219515‑2219797                                                                                                                                             |                                                                                                                                               gCGAATTAAGAGAAAAGCATAGTTGATAATGGCGGGGTTAGCTTGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTa                                                                                                                                              >  1:627567/1‑143 (MQ=255)     aTTAAGAGAAAAGCATAGTTGATAATGGCGGGGTTAGCTTGAGCGGAAGGATTCAGTTGCAGAATCAGATACATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTCTCCCGCCcacaca                                                                                                                                          >  2:855226/1‑141 (MQ=255)         agagAAGAGCATAGTTGATAATGGCGGGGTTAGCTTGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGgc                                                                                                                                      <  2:473984/143‑1 (MQ=255)         agagAAAAGCATAGTTGATAATGGCGGGGTTAGCTTGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTTCACAGGgc                                                                                                                                      >  1:342062/1‑143 (MQ=255)         agagAAAAGCATAGTTGATAATGGCGGGGTTAGCTTGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATAGTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGgc                                                                                                                                      >  1:799850/1‑143 (MQ=255)             aaaaGCATAGTTGATAATGGCGGGGTTAGCTTGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCaa                                                                                                                                  >  1:860994/1‑143 (MQ=255)               aaGCATAGTTGATAATGGCGGGGTTAGCTTGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAAc                                                                                                                                >  1:293061/1‑143 (MQ=255)                 gtatatgtGATAGTGTAGGGTTTAGCTGTAGCGGGAGGATGCCGTTGCAGAGTCAGATAAATACTTAAGAGGCAGATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGt                                                                                                                              <  2:212429/136‑1 (MQ=37)                  aaTAGTTGAGAGTGGCTGAGTAAGCTTTAGCGGAATGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTc                                                                                                                             <  2:526691/142‑1 (MQ=38)                       ttGATAATGGCGGGGTTAGCTTGAGCGGAAGGATTCAGTTGCAGAATCAGATATATACGTAAGAGGCATATTCGGTCCTTCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGcc                                                                                                                        <  1:557987/143‑1 (MQ=255)                           tAATGGCGGGGTTAGCTCGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTa                                                                                                                    <  1:191876/143‑1 (MQ=255)                                gCGGGGTTAGCTTGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGAGCGCAAACGTCGCGCCCTTACTaaa                                                                                                               <  2:873603/143‑1 (MQ=255)                                     gTTAGCTTGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTCAAGCAtt                                                                                                          >  1:480814/1‑143 (MQ=255)                                      ttAGCTTGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTa                                                                                                         <  1:859141/143‑1 (MQ=255)                                          cTTGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGc                                                                                                     <  2:705973/143‑1 (MQ=255)                                           ttGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCa                                                                                                    >  1:489257/1‑143 (MQ=255)                                                  gAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCaaa                                                                                             >  1:402141/1‑143 (MQ=255)                                                           aGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCGTTACTAAAGCATTCCAGCAACACAAGCCAGCCttt                                                                                    >  2:126197/1‑143 (MQ=39)                                                                   aaTCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCGCCTCTCTTAAcgc                                                                            >  2:212140/1‑143 (MQ=255)                                                                     tCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACGAACGCATTACAGCAACTCAAACTCGCCCCTCCTAAcgcgc                                                                          >  2:2966/1‑142 (MQ=39)                                                                         aTAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCgg                                                                      <  1:554915/143‑1 (MQ=255)                                                                          tAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGa                                                                     <  1:53222/143‑1 (MQ=255)                                                                                cTTAAGAGGCATAGTCGGTCCGGCGGTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGAATCAGt                                                               <  2:830943/143‑1 (MQ=255)                                                                                      agGGATATTCGGTCCGGCGTTTCCGGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGAATCAGTGCCGAt                                                         <  2:367710/143‑1 (MQ=255)                                                                                      agGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGAATCAGTGCCGAt                                                         >  1:98033/1‑143 (MQ=255)                                                                                      agGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGAATCAGTGCCGAt                                                         >  1:589863/1‑143 (MQ=255)                                                                                             ttCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACGCATGCGGAATCAATGCCGATAAAGACa                                                  >  1:437270/1‑143 (MQ=255)                                                                                               cGGTCCGGCTTTCCCTGCCGGACGCGGCGCGAGCGCCTTATCCGGCCTACAACGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCGCCGTTCTTAACGCGTGCGGAATCAGTGCCGATAAAGACAtt                                                <  2:663296/143‑1 (MQ=255)                                                                                               cGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCACTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGCATCAGTGCCACTACAGACAtt                                                >  2:436705/1‑143 (MQ=39)                                                                                                 gTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGAATCAGTGCCGATAAAGACATTGa                                              >  1:652853/1‑143 (MQ=255)                                                                                                 gTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCACATTTCTCAACGCGTGCTGAATCAGTTCCGATAAAGCCATTGa                                              >  1:689028/1‑143 (MQ=39)                                                                                                  tCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCGTTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGAATCAGTGCCGATAAAGACATTGaa                                             <  2:366229/143‑1 (MQ=255)                                                                                                  tCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGAATCAGTGCCGATAAAGACATTGaa                                             <  2:527901/143‑1 (MQ=255)                                                                                                   ccGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGAATCAGTGCCGATAAAGACATTGAAc                                            <  1:216563/143‑1 (MQ=255)                                                                                                       cGTTTCCTGCCCGATGCGGCGCGAGCGCCCTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACCAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGAATCAGTGCCGATAAAGACATTGAACTTGc                                        <  1:723539/143‑1 (MQ=255)                                                                                                        gTTGCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGGGCGAGCTTCGCACCCTTACTAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGAATCAGTGCCGATAAAGACATTGAACTTGcc                                       <  1:881758/143‑1 (MQ=39)                                                                                                         tttCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGAATCAGTGCCGATAAAGACATTGAACTTGCCa                                      <  1:825725/143‑1 (MQ=255)                                                                                                         tttCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGAATCAGTGCCGATAAAGACATTGAACTTGCCa                                      >  2:681483/1‑143 (MQ=255)                                                                                                                         gcgcGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAACCATTACAGCAACTCACACTCGCCTTTCTTAACGCGTGCGGAATCAGTGCCGATAAAGACATTGAACTTGCCAGGCTCGGCGTCATAtt                      >  1:778349/1‑143 (MQ=255)                                                                                                                             gAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGAATCAGTGCCGATAAAGACATTGAACTTGCCAGGCTCGGCGTCATATTTCAt                  <  1:744277/143‑1 (MQ=255)                                                                                                                                  ccTTAGCCGGCCTACAACGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGAATCAGTGCCGATAAAGACATTGAACTTGCCAGGCTCGGCGTCATATTTCATCTGtt             <  2:650690/143‑1 (MQ=255)                                                                                                                                   cTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGAATTACAGCAACTCAAACTCGCCTTTCTCAACGCGTGCGGAATCAGTGCCGATAAAGACATTGAACTTGCCAGCCTCGGCGTCCTATTTCCTCAGTTg            >  2:485431/1‑143 (MQ=255)                                                                                                                                    gtagccGGCCGAGAAGGGGCGCGAAGGTCGCGCCCGTACGAAAGCATTACAGCAACTCACACTCGCCTTGCGTACCGCGTGCGGAATCAGTGCCGATAAAGACATTGAACTTGCCAGGCTCGGCGTCATATTTCATCTGTTGa           <  2:264796/139‑1 (MQ=255)                                                                                                                                     tATCCGGCCTAGAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGAATCAGTGCCGATAAAGACATTGAACTTGCCAGGCTCGGCGTCATATTTCATCTGTTGAt          <  1:727542/143‑1 (MQ=255)                                                                                                                                     tATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACGAAAGCGTTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGAATCAGTGCCGATAAAGACATTGAACTTGCCAGGCTCGGCGTCATATTTCATCTGTTGAt          <  2:683929/143‑1 (MQ=255)                                                                                                                                             cTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGAATCAGTGCCGATAAAGACATTGAACTTGCCAGGCTCGGCGTCATATTTCATCTGTTGATTCCAGAAc  <  2:402141/143‑1 (MQ=255)                                                                                                                                             cTACAAAGGGCGCAAACGTCGCGCCCTTACCAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACCCGTGCAGAATCAGTGCCGAGAAAGACATTGAACTTGCCAGGCGCGGCGTCAGACGTCATCCGCCGACTCCAGacc  >  2:175957/1‑141 (MQ=255)                                                                                                                                             |                                                                                                                                               GCGAATTAAGAGAAAAGCATAGTTGATAATGGCGGGGTTAGCTTGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTACTAAAGCATTACAGCAACTCAAACTCGCCTTTCTTAACGCGTGCGGAATCAGTGCCGATAAAGACATTGAACTTGCCAGGCTCGGCGTCATATTTCATCTGTTGATTCCAGAAC  >  NC_000913/2219515‑2219797

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.