New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2047464	47 (0.960)	4 (0.090)	4/266	6.6	7.7%	coding (2527/7077 nt)	yeeJ	putative adhesin
	?	NC_000913	= 2047546	52 (1.130)					coding (2609/7077 nt)	yeeJ	putative adhesin
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGAAACAAACGTTAATCGTCAGTTTTGTCGGCGACTCGAGTACTGCGCAGGTTGATCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAATAGCCACGACGGGATCGCCACAGCTACGCTGACCAGTTTGAAAAATGGTGATTATAGGGTTAC  >  NC_000913/2047411‑2047684                                                                                                                                        |                                                                                                                                           tGAAACAACCGTTACTCGTCAGTTTTGTCGGCGACTCGAGTTCTGCGCAGGTTGATCTGCAGAAGTCGAAAAATTAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTg                                                                                                                                     <  2:552185/143‑1 (MQ=255)     acaaacGTTAATCGTCAGTTTTGTCGGCGACTCGAGTACTGCGCAGGTTGATCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCa                                                                                                                                 >  1:38504/1‑143 (MQ=255)      caaacGTTAATCGTCAGTTTTGTCGGCGACTCGAGTACTGCGCAGGTTGATCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCGCaa                                                                                                                                >  2:468789/1‑143 (MQ=255)       aaacGTTAATCGTCAGTTTTGTCGGCGACTCGAGTACTGCGCAGGTTGATCTGCAGAAGTCGAAAAATGCAGTGGTTGCTGACGGCAATCACAGCGTCACAATGACCGCGCGCGTCCGGGGTGCAAAGCGCAACCTGCCCaag                                                                                                                               >  2:552374/1‑142 (MQ=255)               aTCGTCAGTTTTGTCGGCGACTCGAGTACTGCGCAGGTTGATCTGCAGAAGTCGAGAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCCATGACgccct                                                                                                                       >  2:45769/1‑139 (MQ=255)                tCGTCAGTTTTGTCGGCGACTCGAGTACTGCGCAGGTTGATCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATg                                                                                                                      <  2:408222/143‑1 (MQ=255)                tCGTCAGTGTTGGCGGCGACTCGAGTACTGCGCAGGTGGATCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATg                                                                                                                      <  1:782004/143‑1 (MQ=255)                tCGTCAGGTTTGTCGGCGACTCGAGTACTGCGCAGGTTGATCTGCAGAAGGCGAAAAATGAAGTGGTTGCTGACGGCAATGACCGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATg                                                                                                                      <  2:432715/143‑1 (MQ=255)                    cAGTTTTGTCGGCGACTCGAGTACTGCGCAGGTTGATCTGCAGAAGTCGCACAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATCCAAAAGACAACCCGCTCACTGACGTCACGGTCa                                                                                                                  >  2:626973/1‑143 (MQ=255)                     aGTTTTGTCGGCGACTCGAGTACTGCGCAGGTTGATCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCAc                                                                                                                 >  1:555785/1‑143 (MQ=255)                       ttttGTCGGCGACTCGAGTACTGCGCAGGTTGATCTGCAGAAGTCGAACAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACtt                                                                                                               >  2:741884/1‑143 (MQ=255)                       tttgGTCGGCGACTCGAGTACTGCGCAGGTTGATCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACtt                                                                                                               <  1:90214/143‑1 (MQ=255)                            tCGGCGACTCGAGTACTGCGCAGGTTGATCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCACAAGGCAACCTGCTCAATGACGTCCTGGTCACTTTCAAt                                                                                                          >  2:19693/1‑143 (MQ=255)                              ggCGACTCTAGTACTGGGCGGGTTGGTCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGGCCGCGAGCGTCCGGGATGCAAAAGGCAACCTGCTCAATGATGTCATGGTCACTTTCAATGt                                                                                                        <  2:847733/143‑1 (MQ=255)                              ggCGACTCGAGTACTGCGCAGGTTGATCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGAGATGCAAAAGGCAACCTGCTCAATGAAGTAATGGTCACTTTAAATGt                                                                                                        >  2:247965/1‑143 (MQ=255)                                  aCTCGAGTACTGCGCAGGTTGATCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGCCAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAAt                                                                                                    >  1:377700/1‑143 (MQ=255)                                   cccgatgaCTGCGCAGGTTGATCTGCAGAAGTCGAAAAATGAAGTGGTTGCTTACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAAtt                                                                                                   <  2:849707/136‑1 (MQ=255)                                    tCGAGTACTGCGCAGGTTGATCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTGCAATGTTAATTc                                                                                                  >  1:318029/1‑143 (MQ=255)                                      gAGTACTGCGCAGGTTGATCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTcag                                                                                                <  1:763578/143‑1 (MQ=255)                                          aCTGCGCAGGTTGATCTGCAGAAGTCGAAAAATGAGGTGGTTGCTCACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCaga                                                                                            <  2:359473/143‑1 (MQ=255)                                              cgcAGGTTGATCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTGAGTAGAGGCg                                                                                        >  1:858024/1‑143 (MQ=255)                                                     agaactacAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGa                                                                                 <  1:73554/136‑1 (MQ=255)                                                      gctCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAg                                                                                <  1:357202/141‑1 (MQ=255)                                                      gATCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAAGGACAGCGTCACAATGGCCGCGACCGGCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAg                                                                                <  2:252960/143‑1 (MQ=255)                                                        tCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCTAAGGGCAACCTGCTCAATGACGTCATGGGCACTTTCACTGTTACTTCCGCAGAGGCGAAACTGAGcc                                                                              >  2:721967/1‑143 (MQ=255)                                                        tCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGcc                                                                              >  1:240172/1‑143 (MQ=255)                                                            cAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAAc                                                                          >  2:841999/1‑143 (MQ=255)                                                             aGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGCCGAAACTGAGCCCAAcc                                                                         >  2:530681/1‑143 (MQ=255)                                                                  tagtaacaTGAAGGGGTTGCTGACGGCACTGACAGCGGCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGGTCAATGACGTCATGGTCACTTTAGATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGt                                                                    <  1:416345/136‑1 (MQ=255)                                                                  tCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGt                                                                    >  2:343896/1‑143 (MQ=255)                                                                  tCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGt                                                                    >  1:754117/1‑143 (MQ=255)                                                                    gAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAACAGGCAACCTGCTCAATGACGACCTGGTCACTTTCAATGTTACTTCCGCAGAGGCGCACCTGAGCCCACCCCAAggaa                                                                  >  2:342763/1‑140 (MQ=255)                                                                      aaaaTGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAAt                                                                <  1:39007/143‑1 (MQ=255)                                                                                 gTTGCTGACGGCAATGACAGCGTCACAAGGACCGCGACCGTCCTGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAATAGCCACGACgg                                                     <  2:204502/143‑1 (MQ=255)                                                                                       gACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATTTTAATTCAGCAGAGTCGAAACTGAGCCAAACCGAAGTGAATAGCCACGACGGGATCGc                                               <  1:411272/143‑1 (MQ=255)                                                                                             aaTGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAATAGCACCGACGGGCGCGCCACGGc                                         >  2:696070/1‑143 (MQ=255)                                                                                                gACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAACAGCCACGACGGGGACGCCACAGCTAc                                      >  2:658391/1‑143 (MQ=255)                                                                                                 acacgctCACCATGACCGCGCCCGTTCAGATTTTATAACGCTCCCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAATAGCCACGACGGGATCGCCACAGCTACg                                     <  2:665677/137‑1 (MQ=255)                                                                                                   aGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAATAGCCACGACGGGATCGCCATAGCTACGCt                                   >  1:253/1‑143 (MQ=255)                                                                                                   aGCGTCAAGACGCCCGCGGCCGTCCGGTAGGCAAAAGGCAACCTGCTCAATGCCGTCATGGTCACTTTCAATGTGACTTCAGCCGAGGCGAAACCGAGCCAAACCGAAGTGAATAGCCACGACGGGATCGCCACAGCTACGCt                                   <  2:831939/143‑1 (MQ=255)                                                                                                     cttCACACTGACCGCCACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCTGCAGAGCCGAAACGGATCCAAACCGAAGTGAATAGCCACGACGGGATCGCCACAGCTACGCTGa                                 <  1:108978/141‑1 (MQ=255)                                                                                                     cGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAATAGCCACGACGGGACCGCCACAGCTACGCTGa                                 >  2:872978/1‑143 (MQ=255)                                                                                                         accacgACCGCGACCGTCCGGGATGCAAAAGGCACCCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAATAGCCACGACGGGATCGCCACAGCTACGCTGACCAg                             <  2:511700/138‑1 (MQ=255)                                                                                                          caATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAATAGCCACGACGGGATCGCCACAGCTACGCTGACCAGt                            <  1:110555/143‑1 (MQ=255)                                                                                                            aTGACCGCGACCGTCCGGGATGCAAAAGTCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAATAGCCACGACGGGATCGCCACAGCTACGCTGACCAGttt                          <  2:116359/143‑1 (MQ=255)                                                                                                                    gACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCCGAGGCCAAACTAACCCAAACCGAAGTGAATAGCCACGACGGGATCGCCACAGCTACGCTGACCAGTTTGAAAAATg                  <  1:125004/143‑1 (MQ=255)                                                                                                                     aCCCTCCGGGATGTAAAAGCCACCCTGCTCAATGACGTCATGGTCTCTTGCAAGGTTAATTCAACAGAGGCAAAACAAAACCAAACCGAATTGAATAGCCACGACGGGATCGCCACAACTACGCTAACCAGTTTGAAAAATgg                 <  2:536270/143‑1 (MQ=255)                                                                                                                       cGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGCGAATAGCCCCGACGGGATCGCCACAGCTACGCGGACCAGGTGGGAAAgtggtg               >  2:50094/1‑143 (MQ=255)                                                                                                                        gTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAATAGCCACGACGGGATCGCCACAGATACGCTGACCAGGTTGAAAAATGGTGa              >  2:255216/1‑143 (MQ=255)                                                                                                                         tCCTGGATGCAAAAGGCACCCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAATAGCCACGACGGGATCGCCACAGCTACGCTGACCAGTTTGAAAAATGGTGAt             <  1:712308/143‑1 (MQ=255)                                                                                                                         tCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAATAGCCACGACGGGATCGCCACAGCTACGCTGACCAGTTTGAAAAATGGTGAt             >  2:257896/1‑143 (MQ=255)                                                                                                                             ggATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTCACTTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAATAGCCACGACGGGACCGCGCCAGCTACGCTGACCAGCTTGCACAATGGAGAtcaca         >  2:506750/1‑139 (MQ=255)                                                                                                                                   aaaaGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAATAGCCACGACGGGAACGCCACAGCTACGCTGACCAGTTTGAAAAATGGTGACTATAGGGTTa   >  1:742542/1‑143 (MQ=255)                                                                                                                                    aaaGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAATAGCCACGACGGGATCGCCACAGCTCCGCTGACCAGTTTGAAAAATGGTGATTATAGGGTTAc  <  1:656273/143‑1 (MQ=255)                                                                                                                                        |                                                                                                                                           TGAAACAAACGTTAATCGTCAGTTTTGTCGGCGACTCGAGTACTGCGCAGGTTGATCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAATAGCCACGACGGGATCGCCACAGCTACGCTGACCAGTTTGAAAAATGGTGATTATAGGGTTAC  >  NC_000913/2047411‑2047684

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.