| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,979,486 | IS5 (+) +4 bp | intergenic (‑271/‑264) | insA ← / → uspC | IS1 repressor TnpA/universal stress protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1979486 = | 0 (0.000) | 92 (1.630) | 60/284 | 0.0 | 100% | intergenic (‑271/‑267) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1979489 | 0 (0.000) | 52 (0.920) | 39/284 | 0.5 | 100% | intergenic (‑274/‑264) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
Only 100 of 147 total aligned reads displayed.
GCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATT > NC_000913/1979344‑1979627 | tggggataacgccttgaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc < 2:856862‑M1/1‑1 (MQ=255)tggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc < 1:831807‑M1/1‑1 (MQ=255)ctggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttcccgcttattcgcaccttccc > 1:220389‑M1/143‑143 (MQ=255) ggggataacgccttaaatggcgaagaaacggcctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt > 1:984177‑M1/142‑143 (MQ=255) caaAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACt > 1:617281/1‑143 (MQ=255) caaAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACt > 1:139984/1‑143 (MQ=255) gggataacgccttaaatggcgaagaaacggtctaaatgggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa < 1:987423‑M1/3‑1 (MQ=255) gggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagcagaatttccccgcttattcgcaccttccCTa < 2:189899‑M1/3‑1 (MQ=255) tgatagcgccttaaatggcgaagagacggtctaaataggctggttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa > 2:299918‑M1/140‑143 (MQ=255) ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagcagagtttccccgcttattcgcaccttccCTaa < 2:981422‑M1/4‑1 (MQ=255) ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa < 1:1015662‑M1/4‑1 (MQ=255) ggataacgccttaaagcgcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa > 1:959257‑M1/140‑143 (MQ=255) aaaaTGAAACACTAATAATCTAAATGGTATGTTGCGCACATTCAAAATAACTCTCTTTAAATATTCGGCTGCTATAAATCATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTaa < 2:14973/143‑1 (MQ=255) gataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt < 1:832713‑M1/5‑1 (MQ=255) gAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaag < 1:251666‑M1/143‑6 (MQ=255) acgccttaaatggcgaagaaacggtctaaataggctgattcaaagcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTaaa > 1:871554‑M1/135‑143 (MQ=255) cgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaacatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctaagtcgtc > 1:609960‑M1/134‑137 (MQ=255) gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctaagtcgtcc < 1:559072‑M1/11‑8 (MQ=255) gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcacctgccCTAATTAAATa < 1:130248‑M1/11‑1 (MQ=255) gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaacttccctaagtcgtcc < 2:805630‑M1/11‑8 (MQ=255) gcctcaaatcgcgaaggaactgtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctaagtcgtcc > 2:469134‑M1/133‑136 (MQ=255) ccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATAc < 1:767623‑M1/12‑1 (MQ=255) ccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaataggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcctattcgcaacttgcctaatattagct < 2:240506‑M1/12‑8 (MQ=255) ttaaagggcgaagaaacggtctaaataggctgattcaaggcatttaggggagaaaaaatcggctcaaacatgaagaaatgaaatcactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaa > 2:504891‑M1/130‑143 (MQ=255) tggcgaagaaacggtataaataggctgattcaaggcatttacggaaagaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaagaaa > 2:489694‑M1/125‑143 (MQ=255) tcgcgaagaaacgctctagagaggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaagaaa > 2:380814‑M1/125‑143 (MQ=255) tCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtc > 1:97029‑M1/1‑125 (MQ=255) cgaagaaaaggtctaaaaaggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaattgccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGc > 1:397976‑M1/122‑143 (MQ=255) gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGca < 1:967400‑M1/23‑1 (MQ=255) aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGcaa > 1:940680‑M1/120‑143 (MQ=255) ggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCaa > 2:2919‑M1/113‑143 (MQ=255) aTGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatga < 2:131732‑M1/143‑29 (MQ=255) gTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgaga < 1:594833‑M1/143‑31 (MQ=255) ttGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagat > 2:54377‑M1/1‑112 (MQ=255) aagaggcttattcaaggcatgtacgggagaaaaaatcggctcaaaaatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaat > 2:606153‑M1/107‑143 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaa > 1:850320‑M1/102‑143 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcacaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaacgttaa < 2:261210‑M1/42‑1 (MQ=255) gatgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaa > 1:970763‑M1/102‑143 (MQ=255) caGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt < 2:30599‑M1/143‑39 (MQ=255) caGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt < 2:402561‑M1/143‑39 (MQ=255) ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaat > 2:76493‑M1/101‑143 (MQ=255) ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaat < 1:312414‑M1/43‑1 (MQ=255) tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAatcaacttaatgaaaata < 2:493411‑M1/44‑7 (MQ=255) gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCACCAATCAACTTAATGTTAATGa < 1:765690‑M1/45‑1 (MQ=255) attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGaa < 2:703768‑M1/46‑1 (MQ=255) tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTACTTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAAt < 1:706322‑M1/48‑1 (MQ=255) tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAtt > 1:431076‑M1/96‑101 (MQ=255) tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAtt < 2:431076‑M1/6‑1 (MQ=255) aaaTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggacggtgcacacacgtccctgatacgagatcacgtttgtcgcc > 2:132858‑M1/1‑99 (MQ=255) aaaTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc < 1:918705‑M1/143‑45 (MQ=255) aaaTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc < 1:731673‑M1/143‑45 (MQ=255) aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTACTGAAATGt < 2:368420‑M1/50‑1 (MQ=255) aCTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag > 1:164076‑M1/1‑94 (MQ=255) gatttacgggaaaaaaaagcggctcgaacatgaaggaatgagatgactgagacaaccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTa > 2:662272‑M1/90‑143 (MQ=255) catttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttatccgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTa < 2:817249‑M1/54‑1 (MQ=255) tCACCGTAAATAATCATCTGCTAGAAATGATCACTTTCATTGAAGACCATATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggatcc > 1:474848‑M1/1‑92 (MQ=255) acgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTCAATGTTAATGAAATGTTTTACatat < 2:959100‑M1/59‑1 (MQ=255) cgggagaaaaaatccgctcaaacatgaagaaatgaaacgactgagtcagccgacaagaatttccccgcttattcgcaccttccCTAATTAAATACAAATAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACatata > 1:66599‑M1/84‑143 (MQ=255) gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTa < 1:725555‑M1/63‑1 (MQ=255) aataatCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagctcacgtttgtcatctggagccatagaaca > 1:573343‑M1/1‑84 (MQ=255) ataatCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag < 1:811335‑M1/143‑61 (MQ=255) gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAAc > 1:592301‑M1/79‑143 (MQ=255) aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCa > 1:541948‑M1/77‑143 (MQ=255) tcatcTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt < 1:115950‑M1/143‑65 (MQ=255) atcTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatctttgtcatctggagccatagaacagcgtcca > 1:614799‑M1/1‑77 (MQ=255) tcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAACCAACTTAATGTTAATGAAATGTTTTACATATATTAACCCCTTGt < 2:128639‑M1/72‑1 (MQ=255) cTGGTATAAATAATCACGTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc < 2:334445‑M1/143‑69 (MQ=255) gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTa < 2:736497‑M1/75‑1 (MQ=255) tataAATAATCACTTACATGCAATACCAAATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgagatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 2:221648‑M1/143‑73 (MQ=255) ctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTACTTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTaa < 1:637289‑M1/76‑1 (MQ=255) ctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTaa < 1:990361‑M1/76‑1 (MQ=255) tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAAt > 2:243111‑M1/67‑143 (MQ=255) ataaataaTCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTCAggaaggtgcgaacaagtccctgatatgcgatcctgtttgtcctctggcgccatagcaccgggttcatcatgag > 1:344904‑M1/1‑70 (MQ=255) aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCg > 2:831807‑M1/64‑143 (MQ=255) catgaggcaatggaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGga > 2:811161‑M1/62‑143 (MQ=255) catgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGga > 1:181735‑M1/62‑143 (MQ=255) aatCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcaggagtcatca > 1:649037‑M1/1‑64 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACCTAATGTCAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCa > 1:522798‑M1/56‑143 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATCAAATACAAAGAAAGGCAACAATCAACTTAATGTTCATGAAGCCACCTACATATATTAACCACTTGTTAAATGCGgagaacca < 2:445394‑M1/88‑4 (MQ=255) tttCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgcgatcatgtttgtcttctggagccatagaacagagttcattatgagtcatcaacttac > 1:317918‑M1/1‑58 (MQ=255) tttCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac > 2:180025‑M1/1‑58 (MQ=255) aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAg < 1:181078‑M1/89‑1 (MQ=255) gCAATACCATATAAGTTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgacatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc < 1:92671‑M1/143‑92 (MQ=255) aTACCAGATAAGCTATTGTTAAACAGACACTTACCGCACAACAATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga < 2:736413‑M1/143‑95 (MQ=255) aTAAGCGTTTTTTAAACAGACACTTACCGTACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa < 2:901309‑M1/143‑102 (MQ=255) gccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAAt < 1:621905‑M1/108‑1 (MQ=255) aGCTATGTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc < 2:334658‑M1/143‑105 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAAtt > 2:767623‑M1/35‑143 (MQ=255) tttAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagta > 1:864183‑M1/1‑32 (MQ=255) tttAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagta > 2:179580‑M1/1‑32 (MQ=255) ttAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgcgatcatgtttgtcatctggagccatagaacaaaaatcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaa > 1:376551‑M1/1‑31 (MQ=255) ttAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaa > 1:824817‑M1/1‑31 (MQ=255) ttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAAt > 2:484804‑M1/24‑143 (MQ=255) ccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtata < 2:520433‑M1/124‑1 (MQ=255) gcttattcgcaccttccCTAATTAAATACAAAGTAAGTCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATg > 2:208434‑M1/18‑143 (MQ=255) tcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCAcc < 1:335754‑M1/132‑1 (MQ=255) cGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaaacgcggtcagaccaga > 1:628445‑M1/1‑15 (MQ=255) cGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcaggaagcgccgtcagaacaga > 1:460399‑M1/1‑15 (MQ=255) gcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTCCACTATTTTCTTATAATTACATTTGAAATTATATGATCAACgg < 2:156046‑M1/134‑1 (MQ=255) accttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGGACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGa < 1:847097‑M1/136‑1 (MQ=255) | GCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATT > NC_000913/1979344‑1979627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |