New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3987308	53 (0.940)	4 (0.070)	4/274	8.1	7.1%	coding (575/1197 nt)	hemY	putative protoheme IX synthesis protein
	?	NC_000913	= 3987325	54 (0.990)					coding (558/1197 nt)	hemY	putative protoheme IX synthesis protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATCCATCAGGCCAATCCATGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTCGTTGCCGGCCAGCTC  >  NC_000913/3987172‑3987447                                                                                                                                         |                                                                                                                                            aTCCATCAGGCCAATCCATGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCCGCCGTa                                                                                                                                       >  2:921750/1‑143 (MQ=255)  tCCATCAGGCCAATCCATGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTaa                                                                                                                                      <  1:81145/143‑1 (MQ=255)          gCCAATCCATGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCCGACGTACTACTTCCg                                                                                                                              >  2:972017/1‑143 (MQ=255)          gCCAATCCATGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCg                                                                                                                              >  1:35941/1‑143 (MQ=255)               tCCATGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATAGCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGAtgg                                                                                                                         >  1:531520/1‑143 (MQ=255)                   tGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGAtggcgtg                                                                                                                     <  1:707619/143‑1 (MQ=255)                   tGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGAtggcgtg                                                                                                                     <  2:830482/143‑1 (MQ=255)                    gCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGAtggcgtgg                                                                                                                    >  2:563000/1‑143 (MQ=255)                       tgttgtTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGGTAGTATCCAGCAGCGAACTCCATCCACCTGTGCGGCTCTACGCCTGTTCCGCCCGACGTAACACTCCCGGCtggcctggcgc                                                                                                                 >  2:420888/1‑142 (MQ=255)                               cAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATCCTTCCGGATGGCGTGGCGTAACTTCca                                                                                                         >  1:220301/1‑143 (MQ=255)                               cAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCca                                                                                                         >  1:489549/1‑143 (MQ=255)                               cAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCca                                                                                                         >  1:342917/1‑143 (MQ=255)                               cAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCca                                                                                                         >  1:924499/1‑143 (MQ=255)                                  cATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCCTGCACCTGTGCGGAGATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTATCTTcgcgca                                                                                                      >  2:827176/1‑138 (MQ=255)                                  cATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCCGTGCGGCTATACGCCTGTTCCGCCAGCCGTAATACTCCCGGCGGGCGCGGCGTAACTGCcagca                                                                                                      >  2:758812/1‑143 (MQ=255)                                    ttGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATGCGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCagcagc                                                                                                    <  2:749018/143‑1 (MQ=255)                                     tGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGACGTGGCGTAACTTCAAGCATCt                                                                                                   >  1:833110/1‑143 (MQ=255)                                        aCGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCCGACGTAATACTTCCGAATGGCGTGGCGTAACTTCCAGCAGCTTAt                                                                                                >  1:622118/1‑143 (MQ=255)                                          gATGTTATTCATCACCAACATGGGCTTGCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGGGGGCGTGGCGGGACGTCCagcagccgagcg                                                                                              >  2:946464/1‑137 (MQ=255)                                            tGTTCTTCGTCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACATGTGCGGCTATTCGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCAc                                                                                            <  2:765065/143‑1 (MQ=255)                                                 ttcATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGCCGTAATACTTCCGGATGGCGTGGCCTAACTTCCAGCAGCTTCGCCAcccgcc                                                                                       >  1:999176/1‑138 (MQ=255)                                                  tcatcaCCACCATGGGCTTTCGCCCTTGACGCGATAATATCCTGCTGCGGACGCCATGCACCTGTGCGGATATACGCCTCTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTg                                                                                      <  2:602900/143‑1 (MQ=255)                                                      caCCAACGTCAGCTTTCGCCATTGCTGGGATAATATCCAGCAGCGAGCTCCATGCGCCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGt                                                                                  <  2:1017650/143‑1 (MQ=255)                                                       aCCAACGTGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGCTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTg                                                                                 <  2:253430/143‑1 (MQ=255)                                                       aCCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGTTGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTg                                                                                 >  1:444284/1‑143 (MQ=255)                                                                   tttCGCCATTGATGGGATAATATCCAGCAGCGAACACCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGAGTAACTTCCAGCAGACTATCCACGCCGTCGCGTGCCGCATggaatt                                                                     >  2:94342/1‑139 (MQ=255)                                                                     tCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCAACTCCGTGGCGTGCAGCATGGTTTTCa                                                                   <  2:125030/143‑1 (MQ=255)                                                                     tCGCCATTGAGGGGATAATTGCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCa                                                                   <  2:242803/143‑1 (MQ=255)                                                                        ccATTGATGGGATAATATCCACCGGTGAGGCAGAGACACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGGGGCGTAACTTCCAGCAGCTTATCCACGCCGGGGCGAGCAGCACGGTTTTCATTa                                                                >  2:995368/1‑143 (MQ=255)                                                                                  gATAATATCTAGCATCGAACTCCATGCACCTGTGCGGGTATACGCCGGTTCCGCCAGACGTGATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGtt                                                      <  2:77461/143‑1 (MQ=255)                                                                                   ataataTCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTg                                                     <  1:157633/143‑1 (MQ=255)                                                                                    taataTCCAGCAGCGAACTCCATGCACCCGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGc                                                    <  2:761645/143‑1 (MQ=255)                                                                                      agagacagcagCGAACTCCATGCACCTGTGCGGATATACGCCTGTCCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAg                                                  <  1:492362/138‑1 (MQ=255)                                                                                           cagcagCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGGCAGCCGTAATACGCCCGGCTGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCCTGGTGTTCATTACGGGCCAGTGGCGGGCGtg                                             >  1:309251/1‑142 (MQ=255)                                                                                            agcagcGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTGTTCATTACGGGCCAGTTGCCGACGTAc                                            >  2:398350/1‑143 (MQ=255)                                                                                                gcGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACCTCCAGCAGCTTATCCACGCCGTGGCGTGCCGCATGGATTTCATTAAGGGCCAGTTGCAGACGTACGCgg                                        >  2:202409/1‑143 (MQ=255)                                                                                                gcGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGAAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTACAAACGTACGCgg                                        >  1:885975/1‑143 (MQ=255)                                                                                                 cGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTAATCggg                                       >  1:742526/1‑143 (MQ=255)                                                                                                       ccATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGAttt                                 <  2:171361/143‑1 (MQ=255)                                                                                                           gCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTAc                             <  1:995368/143‑1 (MQ=255)                                                                                                             aCCGGTGCGGATATACGCCTGTTCCGCCAGACGTCGTGCGTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCg                           <  2:444284/143‑1 (MQ=255)                                                                                                                  tgCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATg                      <  1:563000/143‑1 (MQ=255)                                                                                                                  tgCGGATATACGCCTGTTCCGCCAGACGTAATACTGCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATg                      <  1:257188/143‑1 (MQ=255)                                                                                                                  tgCGGATATACGCCTGGTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACCTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATg                      <  1:908279/143‑1 (MQ=255)                                                                                                                   gCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTCCCCGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCCTTACGGCCCCGTTGCAGGCCGACGCGGCAGGTGTCTACCGGCATgg                     >  2:587869/1‑143 (MQ=255)                                                                                                                    cGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGAGGGGGAGTTCTACCGGAGTGgt                    >  1:224725/1‑143 (MQ=255)                                                                                                                       ctataCGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTc                 <  1:914549/142‑1 (MQ=255)                                                                                                                       atatACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTc                 <  2:489549/143‑1 (MQ=255)                                                                                                                        tataCGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTCg                <  1:645815/143‑1 (MQ=255)                                                                                                                         ataCGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGCTGCAGACGTACGCGGGTGAGTTCTACCGAACTGGTGTCGt               >  2:211518/1‑143 (MQ=255)                                                                                                                           aCGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACACGGGTGATTTCTGACGGAATGGTGTCGTTg             >  2:848783/1‑143 (MQ=255)                                                                                                                            cGCCTGTTCCGCCAGATGCAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTCGTTGc            <  2:479811/143‑1 (MQ=255)                                                                                                                                      gCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGCTTTCTACCGGAATGGTGTCGTTGCCGGCCAGCTc  >  2:250817/1‑143 (MQ=255)                                                                                                                                         |                                                                                                                                            ATCCATCAGGCCAATCCATGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTCGTTGCCGGCCAGCTC  >  NC_000913/3987172‑3987447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.