New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1207805	6 (0.110)	60 (1.200)	50/252	0.0	88.7%	coding (305/630 nt)	stfP	e14 prophage; uncharacterized protein
	?	NC_000913	= 1209602	10 (0.200)					pseudogene (18/501 nt)	stfE	pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

ATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTA‑TTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAA  >  NC_000913/1209461‑1209743                                                                                                                                               |                                                                                                                                              aTCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTA‑TTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACCGAACCGGGACACCACCAGGTAATGCAGAGc                                                                                                                                              <  2:711017‑M2/143‑2 (MQ=255)       cAATTTATTTGTCGGATCAGCCTTTGCCAGTTCCGGGTA‑TGCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctc                                                                                                                                        >  2:655588‑M2/1‑136 (MQ=255)         atttatttGTCGGATAAGCCTTTGCCAGTTCCGGGTA‑TTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctccc                                                                                                                                      <  2:230039‑M2/143‑10 (MQ=255)              tttGTCGGATAAGCCTTTGCCAGTTCCGGGTA‑TTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGACTGTTGGCGGAGTGGAACGCGAATTCCGGACCGGGACACCAACAGGTCATGCAGAGCCGTCTCCCACAcc                                                                                                                                 >  1:189367/1‑143 (MQ=255)                tGTCGGATAAGCCTTTGCCAGTTCCGGGTA‑TTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGGCACCAACAGGTAATGCAGAGccttctcccaaaccaa                                                                                                                               <  1:832055‑M2/143‑17 (MQ=255)                    ggATAAGCCTTTGCCAGTTCCGGGTA‑TTCTTCAGCAGAAAAAGAGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTACTCCCAAACCAACgct                                                                                                                           >  2:647032/1‑141 (MQ=255)                           ccGTTGCCAGGTC‑GGGTAGTTCTTCAGGAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaga                                                                                                                    >  2:779540‑M2/1‑116 (MQ=255)                            cTTTGCCAGTTCCGGGTA‑TTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGGAATGCAGAGccttctcccaaaccaagggtttccagag                                                                                                                   <  1:253433‑M2/143‑29 (MQ=255)                            cTTTGCCAGTTCCGGGTA‑TTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGGGGCTGAAGGCCACGGAACCGGGACACCAACAGGTGATGCAGAGccttccgccaaaccacggttctcgagcg                                                                                                                   <  2:913604‑M2/143‑29 (MQ=255)                             tttGCCAGTTCCGGGTA‑TTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccacggttttcgagaaa                                                                                                                  <  1:595677‑M2/143‑30 (MQ=255)                                gCCAGTTCCGGGTA‑TTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCCGAGTGGCTGCAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATgaa                                                                                                               <  2:252717/143‑1 (MQ=255)                                 ccAGTTCCGGGTA‑TTCTTCAGCACAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtt                                                                                                              <  2:891092‑M2/143‑34 (MQ=255)                                  cAGTTCCGGGTA‑TTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgttt                                                                                                             >  2:63124‑M2/1‑109 (MQ=255)                                  cAGTTCCGGGTA‑TTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctaccaaaccaaggttttcgagagccgttt                                                                                                             <  2:790409‑M2/143‑35 (MQ=255)                                     ttCCGGGTA‑TTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCCACAGGTAATGCAGAGccttctcccacaccaaggttttcgggagccgtttgcc                                                                                                          <  1:628911‑M2/143‑38 (MQ=255)                                     ttCCGGGTA‑TTCTGCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgca                                                                                                          >  2:991667‑M2/1‑106 (MQ=255)                                        cGGGTA‑TTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacag                                                                                                       <  1:659001‑M2/143‑41 (MQ=255)                                          ggTA‑TTCCTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtg                                                                                                     >  1:295874‑M2/1‑101 (MQ=255)                                           gTA‑TTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgc                                                                                                    <  1:236841‑M2/143‑44 (MQ=255)                                                 cttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAt                                                                                               >  1:221125/1‑143 (MQ=255)                                                  ttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccatggttttcgtgggccgtttgcgcggtgcctgcct                                                                                              <  1:72987‑M2/143‑50 (MQ=255)                                                  ttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccg                                                                                              <  1:712181‑M2/143‑50 (MQ=255)                                                     agcagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttttcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatt                                                                                           >  1:971650‑M2/1‑91 (MQ=255)                                                      gcagAAAAAGCGGCACCATTGCATTTCAGCAAGCCTATTGGCGGAGGGGCTGAAGGCCACGGAACCGGGACACAAACAGGGAATGCAGAGCATTCTACCAAGCCGACGTTCATGAAAATGAAGCAATAACAAGCAAGTggaag                                                                                          >  2:407392/1‑140 (MQ=255)                                                       cagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttg                                                                                         <  2:785242‑M2/143‑55 (MQ=255)                                                        agAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttga                                                                                        <  2:549568‑M2/143‑56 (MQ=255)                                                        agAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttga                                                                                        >  1:21843‑M2/1‑88 (MQ=255)                                                        agAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACACGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttga                                                                                        >  1:19705‑M2/1‑88 (MQ=255)                                                          aaaaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgata                                                                                      >  1:534710‑M2/1‑86 (MQ=255)                                                            aaaGCGGCACCATTGCCTTTCCGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGCGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatc                                                                                    >  1:203890‑M2/1‑84 (MQ=255)                                                            aaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatc                                                                                    <  1:556983‑M2/143‑60 (MQ=255)                                                            aaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTACGAAACTAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTcc                                                                                    >  1:38378/1‑143 (MQ=255)                                                             aaGCGGCCCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcg                                                                                   >  1:211246‑M2/1‑83 (MQ=255)                                                                        ttGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCCACAGGTAATGCACAGccttctcccaaacccaggttttcgagagccgtttgcacagtgccatccgatctgatatcgcccaacggagt                                                                        <  2:963417‑M2/143‑72 (MQ=255)                                                                        ttGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgcgagccgtttgcacagtgccatccgatctgatatcgccacacggatt                                                                        <  2:113874‑M2/143‑72 (MQ=255)                                                                        ttGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttatcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaccggatt                                                                        <  2:608920‑M2/143‑72 (MQ=255)                                                                           cATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaacaaagaggtgcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattctt                                                                     >  1:962419‑M2/1‑69 (MQ=255)                                                                            aTTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttg                                                                    <  2:998197‑M2/143‑76 (MQ=255)                                                                              ttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATCACAAGCAACTGGCATCATTCCTGCTTTTACCAggcggcg                                                                  >  1:398297/1‑141 (MQ=255)                                                                                     agccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACAt                                                           <  1:981233/143‑1 (MQ=255)                                                                                      gccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaaca                                                          <  1:492890‑M2/143‑86 (MQ=255)                                                                                         tggtggCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagca                                                       >  2:333547‑M2/1‑55 (MQ=255)                                                                                         tGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagca                                                       <  1:746232‑M2/143‑89 (MQ=255)                                                                                             ggCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgc                                                   >  1:290125‑M2/1‑51 (MQ=255)                                                                                              ggggtgtgtCTGCAGGTGACGGAACCGGGACATCGATAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                  <  2:553247/138‑1 (MQ=255)                                                                                              gCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAAGCAGAGccttcccccaaaccaaggttttcgagagccgtttgcacagggccatccgctttgatatccccaaacggattcttgcggcgtaacagcagccag                                                  <  1:105715‑M2/143‑94 (MQ=255)                                                                                                ggAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACGTGCTGATTGGCt                                                >  2:894565/1‑143 (MQ=255)                                                                                                    tGGCTGAAGGCCACGGAACCGGGACACCAGCAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagt                                            <  2:698498‑M2/143‑100 (MQ=255)                                                                                                    tGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGt                                            <  2:852843/143‑1 (MQ=255)                                                                                                     ggCTGAAGGCCACGGAACCGGCACACCAACCGGTGATGCAGAGccttctcccgaaccaaggtttgcgagagccgtgtgcacagtgccagccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtg                                           >  2:955767‑M2/1‑43 (MQ=255)                                                                                                      gCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatctgatatcgccaaacggattcctgcggcttaacagcagcgcgcgaagtgc                                          <  2:165327‑M2/143‑102 (MQ=255)                                                                                                      gCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgacttgatatcgccaaacgggttcttgcgggttgacagcagcgcgcgccgcgc                                          <  2:482991‑M2/143‑102 (MQ=255)                                                                                                       cTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcacgcgaagtgcg                                         <  1:626934‑M2/143‑103 (MQ=255)                                                                                                       cTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggctcaacagcagcgcgcgaagtgcg                                         <  1:519312‑M2/143‑103 (MQ=255)                                                                                                        tGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcgg                                        <  2:572156‑M2/143‑104 (MQ=255)                                                                                                         gAAGGCCAGTGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccttttgcacactgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggt                                       >  1:345446‑M2/1‑39 (MQ=255)                                                                                                              ccACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttcccgcttaacagcagcgcgcgaagcgcgggaagta                                  <  2:950530‑M2/143‑110 (MQ=255)                                                                                                                aCGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgctatcgcccaacggattcttgcggcctaacagccgcgcgcccagcgcggcaagtaac                                <  2:557855‑M2/143‑112 (MQ=255)                                                                                                                aCGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcctaaccgcagcgcgcgaagcgcggtcagtaac                                <  2:371951‑M2/143‑112 (MQ=255)                                                                                                                  ggAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactg                              >  2:32612‑M2/1‑30 (MQ=255)                                                                                                                  ggAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtaccatccgatttgatatcgccgaacggcttcttgcggcttaacagcagcgcgcgaagtgcggtaaggaacta                              <  1:488828‑M2/143‑114 (MQ=255)                                                                                                                    aaCCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgcgagccgtttgcccagtgccatccgatttgatatcgccaaacggcttcttgcggcttaacagcagcgcgcgaagtgcggtacgtaactggt                            <  2:403473‑M2/143‑116 (MQ=255)                                                                                                                      ccGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaagggtttcgagagccgtttgcacagtgccatccgatttgatatggccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcg                          <  1:350225‑M2/143‑118 (MQ=255)                                                                                                                        gggACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccacacggattctggcggccttactgctgcgcgcgaagcgcggtgagtaactagtagtg                        <  1:615544‑M2/143‑120 (MQ=255)                                                                                                                         ggACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgc                       <  1:449560‑M2/143‑121 (MQ=255)                                                                                                                         ggACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagacgtttgcacagtgccatccgagttgatatcgccacacggagtattgcggcttcgcagcagcgcgcgcagtcaggtaagtaacgggtcgtgc                       <  2:529083‑M2/143‑121 (MQ=255)                                                                                                                             acCAACAGGTCATGCAGCGccttctcccaaaccgttgttttcgatagccgttcgcacagtgccatccgatttgctatcgctaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgcc                   >  2:354235‑M2/1‑19 (MQ=255)                                                                                                                             acCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgcc                   <  1:601385‑M2/143‑125 (MQ=255)                                                                                                                               cAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgcccc                 <  1:251413‑M2/143‑127 (MQ=255)                                                                                                                                aaCAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgcccct                <  1:996706‑M2/143‑128 (MQ=255)                                                                                                                                 aCAGGTAATGCAGAGccttctcccaacccaaggttttcgagagccgtttgcacagtgccatccgatgtgatatcgccaaacggatgcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgcccctt               >  2:222663‑M2/1‑15 (MQ=255)                                                                                                                                    ggTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacgggttgtggcggagcaacatcagcgcgcgaagtgcggtaagtaacgggtcgtgccgccccttctc            <  1:1007864‑M2/143‑132 (MQ=255)                                                                                                                                            agagccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatctgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtcccgccccttctccaggctgg    <  2:206612‑M2/143‑140 (MQ=255)                                                                                                                                              agccttctccccaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggca  >  1:549568‑M2/1‑2 (MQ=255)                                                                                                                                              agccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggca  <  2:935165‑M2/143‑142 (MQ=255)                                                                                                                                               |                                                                                                                                              ATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTA‑TTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAA  >  NC_000913/1209461‑1209743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.