BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
JC JC	NC_000913	3,836,839	IS5 (–) +4 bp	30.5%	intergenic (+283/‑111)	yicT → / → setC	pseudogene/putative arabinose efflux transporter

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2288919 =	NA (NA)	3 (0.020)	3/432	NT	8.2%	noncoding (1195/1195 nt)	IS5	repeat region
*	?	NC_000913	= 3836842	33 (0.260)	3 (0.020)	3/432	NT	8.2%	intergenic (+286/‑111)	yicT/setC	pseudogene/putative arabinose efflux transporter
*	?	NC_000913	= 3653230	NA (NA)	26 (0.200)	20/432	NT	43.6%	noncoding (1/1195 nt)	IS5	repeat region
*	?	NC_000913	3836839 =	33 (0.260)	26 (0.200)	20/432	NT	43.6%	intergenic (+283/‑114)	yicT/setC	pseudogene/putative arabinose efflux transporter

Only 100 of 120 total aligned reads displayed.

TAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGT  >  NC_000913/2288683‑2289150

          ttAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAAt                                                                                                                                                                                                                               <  2:728325/239‑1 (MQ=255)

              tACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCGGGATTGATTTTCGTATTATTGGCGGTCCCCTAAACCAGCTGGATATCTTTTTTCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTAATGCCAATCCAATTGGTGAAAATAAGGAAGGTGCGAACAAGc                                                                                                                                                                                                                           >  1:47027/1‑239 (MQ=255)

                  gAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCCGCTGGATATCTTTTTCCAGGACAACAACATTAACTGTCTCACCATACTCACCACTTCTTGCCAATGCTATGGGTGTATATAAGGAAGGTGCGGATAAGCaggg                                                                                                                                                                                                                       >  1:158707/1‑239 (MQ=255)

                   aGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTTCCATAAACCAGCTGGGTATTTTTTTTCCAGACAAAAACATCAACTGTCCCACCATACTCAAACGTTGATGCCAATACTATGGGGGATAATAACGAAGGGGAGGATAAAAGGGGa                                                                                                                                                                                                                      >  2:1258801/1‑239 (MQ=255)

                   aGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCCTAAACCCGCCGGGTATTTTTTTTCAGGACAACACCATCACCTGTCTCACCATACTCAACAGTTGTTTCCAATGCTATGGGGTACTATAAGGAAAGTGCGAATAAGCGGTGa                                                                                                                                                                                                                      >  2:1360527/1‑239 (MQ=255)

                   aGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTTCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGa                                                                                                                                                                                                                      >  2:1378035/1‑239 (MQ=255)

                       ttCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCCGCTGGATATCTTTTTCCAGGCAAAAACCATCAACTGGCTCACCATACTCAACAGTTGATGCCCATGCTATGGGTGAATATAAGGAAGGTGCGAATAAACGGGGAAAtt                                                                                                                                                                                                                  >  1:1112658/1‑239 (MQ=255)

                                    ttcattTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAc                                                                                                                                                                                                     <  1:308454/239‑1 (MQ=255)

                                    ttcattTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGGGAATATAAGGAAGGGGCGAATAAGGGGGGAAATTCTTCTCGGATg                                                                                                                                                                                                       >  1:1003713/1‑237 (MQ=255)

                                            aaTGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCCTAAACCAGCTGGGTATCTTTTTTCAGGACAACACCATCAACTGTCTCACCCTACTCAACAGTTTATGCCAATGCCATGGGTGAATATAAGGAAGGTGCGAATAAACGGGGAAATTCTTTTCGGCGGAAtcattca‑t                                                                                                                                                                                            >  2:863101/1‑239 (MQ=255)

                                                     aTACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATTTTTTTTCAGGGCAACACCATAAACTCACTCACCCTACTCCACAGTTGATGCCAATGCTATGGGTGGATATAAGGAAGGTGCGAATAAGCGGGGAAATTTTTCTCGGCCGAACCAGTCC‑TTTCATttct                                                                                                                                                                                   >  1:984357/1‑239 (MQ=255)

                                                     aTACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATTTTTTTTCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCACTGCTATGGGGGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTca‑tttctttttt                                                                                                                                                                                   >  2:1140409/1‑237 (MQ=255)

                                                        cccTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGGTATCTTTTTTCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATTCTATGGGGGAATATAAAGAAGGTGCGAATAAGCGGGGAAATTCTTTTCGGCGGACTAAGTCA‑TTTCATTTATTCa                                                                                                                                                                                >  2:1218705/1‑239 (MQ=255)

                                                            ccGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTTCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTCTGGGTGGATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGtt                                                                                                                                                                           >  1:1334932/1‑239 (MQ=255)

                                                               ttAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTTATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTTTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGgttta                                                                                                                                                                        >  2:150602/1‑237 (MQ=255)

                                                                 aaTTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGc                                                                                                                                                                      <  1:1218705/239‑1 (MQ=255)

                                                                   tttCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATTTTTTTCCAGGACAACACCATCAACTGTCTCACCCTCCTCAACAGGTGATGCCAATGGTATGGGGGAATATAAGGAAAGTGCGAATAAGCGGGGGAATTCTTCTCGGCTGACTCAAGTA‑TTTTCTTTCTTCA‑TGTTTGAGCCg                                                                                                                                                                    >  2:1230828/1‑239 (MQ=255)

                                                                       aGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCCTAAACCCGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTCTGGGTGGATATAAGGAAGGGGCGAATAAGCGGGGGAATTCTTCTCGGCTGACTCAGTCA‑TTTCCTTTTTTCA‑TGTTTGAGGCGGttt                                                                                                                                                                >  1:455965/1‑239 (MQ=39)

                                                                       aGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGAttt                                                                                                                                                                >  1:38199/1‑239 (MQ=255)

                                                                           ttattaCTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAAGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTtc                                                                                                                                                            <  1:737118/239‑1 (MQ=255)

                                                                                   tacACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCCTAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGGAATTCTTCTCGGCTGACTCCGTCA‑TTTCATTTCTTCA‑TGTTTGTGCCGATTTTTTTTCCCGTaa                                                                                                                                                    >  2:86086/1‑239 (MQ=255)

                                                                                   tacACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGGTATCTTTTTTCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTaa                                                                                                                                                    >  2:980473/1‑239 (MQ=255)

                                                                                   tacACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGGTATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAAAAAGCGGGGAAATTTTTTTCGGGTGACTCAGTCA‑TTTTATTTTTTCA‑TGTTTGGACCGATTTTTTTTCCCGTaa                                                                                                                                                    >  2:977432/1‑239 (MQ=255)

                                                                                   tacACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTaa                                                                                                                                                    >  1:191513/1‑239 (MQ=255)

                                                                                     cacCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTTTCGGCTGACTCAGTCA‑TTTCATttctt                                                                                                                                                                                  >  2:7292/1‑208 (MQ=255)

                                                                                     cacCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATttctt                                                                                                                                                                                  <  1:7292/208‑1 (MQ=255)

                                                                                        cAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTATCACCATACTCAACAGTTTATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGGATAAGCGGGGAAATTCTTTTCGGCTGACTCAGTCA‑TTTCCTTTTTTCC‑TGTTTGAGCCGATTTTTTTTCCCGTTAAtt                                                                                                                                                 >  1:579985/1‑236 (MQ=255)

                                                                                          aaTTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAAACCCATCAACTGTCTTACCCTACTCAACAGTTGATGCCAATGCTCTGGGGGACTCTAAGGAAGGTGCGAATAAACGGGGGAATTCTTCTCGCCTGATTCAGTCA‑TTTCCTTTTTTCA‑CGTTTGGGCCGATTTTTTCTCCCGTTACTTCCtt                                                                                                                                             >  1:367055/1‑239 (MQ=255)

                                                                                           aTTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCCTAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTTATGCCCATGCTATGGGTGAATATAAGGAAGGAGCGAAAAAGCGGGGAAATTCTTCTCGGCTGGCTCAGTCA‑TTTCATTTCTTCT‑TGTTTGTGCCGATTTTTTCTCCCCTAAATGCCTTg                                                                                                                                            >  2:1272887/1‑239 (MQ=255)

                                                                                           aTTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGGTATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATTGGTGAATATAAGGAAGGTGCGAATAAGCGGGGGAATTTTTCTTGGCTGACTCAGTCA‑TTTCATTTCTTTA‑AGGTTGAGCCGATTTTTTCTTCCGTAAATGCCTTg                                                                                                                                            >  2:670724/1‑239 (MQ=255)

                                                                                           aTTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAAAACCATCAACTGTCTCACCCTATTCAACCGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGCATAAGCGGGGAAATTCTTCTCGGCTGACGCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTg                                                                                                                                            >  1:966133/1‑239 (MQ=255)

                                                                                             tcgtttATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGaa                                                                                                                                          <  2:552920/236‑1 (MQ=255)

                                                                                             tCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGaa                                                                                                                                          <  1:977432/239‑1 (MQ=255)

                                                                                              cTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAAttcttc                                                                                                                                                                                                              <  1:234041/172‑1 (MQ=255)

                                                                                                 ttATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAg                                                                                                                                      <  1:1360527/239‑1 (MQ=255)

                                                                                                 ttATATGCTGTTCGCCGCCAGGATTGAGTTTCGTATTATTGGCGGCACCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAg                                                                                                                                      <  2:984357/239‑1 (MQ=255)

                                                                                                        cTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCCTAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGATGATGCCAATGCTATGGGAGAATATAAGGAAGGTGCGAATAAACGGGGGAATTCTTCTCGGCTGACt                                                                                                                                                                                                    >  2:234041/1‑172 (MQ=255)

                                                                                                         tGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGGTATCTTTTTTCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGAGCGAATAAGCGGGGGAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGGTTTTTTTTCCCGTAAATGCCTTGAATCAGCCTAtttt                                                                                                                              >  2:77501/1‑238 (MQ=255)

                                                                                                         tGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTTCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTTTCGGCTGACTCAGTCA‑TTTCATTTTTTCA‑TGTTTAGGCCGATTTTTTCTCCCGTAAATGCCTTTAATCAGCCTCTTTa                                                                                                                              >  2:66694/1‑239 (MQ=255)

                                                                                                           ttCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCCTAAACCAGCTGGGTATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTTATGCCAATGCTATGGGGGAATATTAGGAAGGGGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCCGTCA‑TTTCATTTCTTCA‑TGTTTTAGCCGATTTTTTCTCCCGTAAATGCCTTTAATCCGCCTAttttg                                                                                                                             >  2:343059/1‑236 (MQ=37)

                                                                                                           ttCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGGTATCTTTTTTCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGGAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAg                                                                                                                             >  1:1127425/1‑238 (MQ=255)

                                                                                                           ttCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGGTATCTTTTTTCACGACAACACCATCAACTGTCTCCCCATACTCAACAGGTTATACCACTTCTATGGGTGAAAATAAAGCAGGGGCGCATAAGCGGGGAAATTTTTTTCGGCCGGCTCAGTCA‑TTTCTTTTGTTCATTGTTTG‑GCCCGTTTTTTTTCCCTGAGATGGCTTGTGTTAGACTAttttt                                                                                                                             >  2:1361663/1‑236 (MQ=255)

                                                                                                             ctcCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTTCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCCATGCTATGGGTGAATATAAAGAAGGTGCGAATAAGCGGGGAAATTTTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGGGCCGCTTTTTTCTCCCGTAAATGCCTTGCATCAGCCTATTTAGAc                                                                                                                           >  2:1360023/1‑238 (MQ=255)

                                                                                                                cGCCAGGATTGATTTTCGTATTATTGGCGGTCCCCTAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGGCTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGCTTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGtt                                                                                                                       >  1:805312/1‑239 (MQ=255)

                                                                                                                cGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGc                                                                                                                                     <  2:390688/225‑1 (MQ=255)

                                                                                                                  ccAGGATTGATTTTCGTATTATTGGCGGTTCCATAAACCCGCTGGTGATCTTTTTTCAGGATAAAACCATCCACTGTCTAACCCAACTCAACAGTTGATGCCAATGTTCTGGGAGAATATAAGGAAGGTGCGAAAAAGCGGGGAGAATATTCTCGGGTGCCTCAGTCA‑TTTCATTTCTTTA‑TGTTTGTGCCGGTTTTTTCTCCCGTACATGCCTTTAATCACCCTATTTTGAcccgttt                                                                                                                     >  2:270268/1‑234 (MQ=255)

                                                                                                                       attgattTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCg                                                                                                                 <  1:102576/238‑1 (MQ=255)

                                                                                                                                        tGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATcc                                                                                               <  1:1272887/239‑1 (MQ=255)

                                                                                                                                           cGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATcccc                                                                                             <  1:343059/238‑1 (MQ=255)

                                                                                                                                           cGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATcccc                                                                                             <  1:1352239/238‑1 (MQ=255)

                                                                                                                                               cccATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGttt                                                                                        <  1:973694/239‑1 (MQ=255)

                                                                                                                                                           cTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtca‑tttcat                                                                                                                                                                                       <  1:1147885/133‑1 (MQ=255)

                                                                                                                                                           cTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtca‑tttcat                                                                                                                                                                                       >  2:1147885/1‑133 (MQ=255)

                                                                                                                                                           cTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTgag                                                                                <  2:979897/235‑1 (MQ=255)

                                                                                                                                                           cTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTgag                                                                                >  1:979897/1‑235 (MQ=255)

                                                                                                                                                                 atCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCa                                                                      <  1:150602/239‑1 (MQ=255)

                                                                                                                                                                    tttttCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAg                                                                                                        <  2:354807/202‑1 (MQ=255)

                                                                                                                                                                    tttttCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAg                                                                                                        >  1:354807/1‑202 (MQ=255)

                                                                                                                                                                     ttttCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTg                                                                   >  2:389721/1‑238 (MQ=255)

                                                                                                                                                                             gACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGt                                                               <  2:481953/234‑1 (MQ=255)

                                                                                                                                                                             gACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGt                                                               >  1:481953/1‑234 (MQ=255)

                                                                                                                                                                             gACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCAt                                                          >  2:1292684/1‑239 (MQ=255)

                                                                                                                                                                                  cacCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATaagg                                                                                                                                                                                                                                          <  2:788750/60‑1 (MQ=255)

                                                                                                                                                                                  cacCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATaagg                                                                                                                                                                                                                                          >  1:788750/1‑60 (MQ=255)

                                                                                                                                                                                  cacCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGt                                                               >  1:681902/1‑229 (MQ=255)

                                                                                                                                                                                  cacCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGt                                                               <  2:681902/229‑1 (MQ=255)

                                                                                                                                                                                       tCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGc                                                 >  2:366430/1‑238 (MQ=255)

                                                                                                                                                                                       tCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGc                                                 >  1:1373021/1‑238 (MQ=255)

                                                                                                                                                                                       tCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTAAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGc                                                 >  1:1191724/1‑238 (MQ=255)

                                                                                                                                                                                             gTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAAc                                          >  1:48163/1‑239 (MQ=255)

                                                                                                                                                                                              tctcACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGc                                                                                                                                     >  1:1098819/1‑148 (MQ=255)

                                                                                                                                                                                              tctcACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACa                                         >  2:1007458/1‑239 (MQ=255)

                                                                                                                                                                                              tctcACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACa                                         >  1:810239/1‑239 (MQ=255)

                                                                                                                                                                                              tctcACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACa                                         >  2:937594/1‑239 (MQ=255)

                                                                                                                                                                                               ctcACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCg                                                                                                                 >  1:119162/1‑166 (MQ=255)

                                                                                                                                                                                               ctcACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCg                                                                                                                 <  2:119162/166‑1 (MQ=255)

                                                                                                                                                                                                 cACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGt                                                               <  1:959878/214‑1 (MQ=255)

                                                                                                                                                                                                 cACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGt                                                               >  2:959878/1‑214 (MQ=255)

                                                                                                                                                                                                   ccATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGt                                                     <  2:468880/222‑1 (MQ=255)

                                                                                                                                                                                                   ccATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGt                                                     >  1:468880/1‑222 (MQ=255)

                                                                                                                                                                                                    cATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTgg                                   <  2:810239/239‑1 (MQ=255)

                                                                                                                                                                                                     aTACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGc                                  <  1:838261/239‑1 (MQ=255)

                                                                                                                                                                                                       aCTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTTCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCa                                <  2:1310328/239‑1 (MQ=255)

                                                                                                                                                                                                        cTCAACAGTTGATGGCAATGCTATGGGTGAATATAAGGAAGGGTCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATGTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCTCTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAg                               <  1:1361663/239‑1 (MQ=255)

                                                                                                                                                                                                         tCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGAtctct                                                                          <  2:99380/195‑1 (MQ=255)

                                                                                                                                                                                                         tCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGAtctct                                                                          >  1:99380/1‑195 (MQ=255)

                                                                                                                                                                                                            aCAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTg                           >  2:1340882/1‑239 (MQ=255)

                                                                                                                                                                                                            aCAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTg                           >  2:1061471/1‑239 (MQ=255)

                                                                                                                                                                                                                ttGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATa                       >  2:901390/1‑239 (MQ=255)

                                                                                                                                                                                                                   aTGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGTCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACa                    >  2:910908/1‑239 (MQ=255)

                                                                                                                                                                                                                   aTGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAg                                                                                                        >  1:750444/1‑155 (MQ=255)

                                                                                                                                                                                                                   aTGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAACAGGGTGGGCAAGCGTGAATAACa                    >  2:959879/1‑239 (MQ=255)

                                                                                                                                                                                                                     gCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATc                  >  1:1042467/1‑239 (MQ=39)

                                                                                                                                                                                                                     gCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATc                  <  1:1007458/239‑1 (MQ=39)

                                                                                                                                                                                                                        aaTGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGcc               >  1:984790/1‑239 (MQ=38)

                                                                                                                                                                                                                          tGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAg             >  1:833095/1‑239 (MQ=37)

                                                                                                                                                                                                                               tGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCATATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGACAGCTGGt        >  1:1171546/1‑239 (MQ=21)

                                                                                                                                                                                                                               tGGGCGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGt        >  1:1021940/1‑239 (MQ=18)

                                                                                                                                                                                                                                   tGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTAt     <  1:1230828/238‑1 (MQ=32)

                                                                                                                                                                                                                                     aaTATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGt  >  1:1398749/1‑239 (MQ=31)

TAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTTCATTTCTTCA‑TGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGT  >  NC_000913/2288683‑2289150

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.