| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,019,572 | A→C | 14.2% | T138P (ACA→CCA) | ssnA → | putative chlorohydrolase/aminohydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,019,572 | 0 | A | C | 14.2% | 169.1 / 2.2 | 65 | T138P (ACA→CCA) | ssnA | putative chlorohydrolase/aminohydrolase |
| Reads supporting (aligned to +/- strand): ref base A (3/50); new base C (8/2); total (12/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.73e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTCGCACAACCATTTTTACTCGGGGCTTTCCCGCGGAATTATGGCAAACATCGCCCCTTGCCCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCTGGTGGAAGCACATATCGGTGCTCACGCGCCGTTTACCGTGCCGGATGCCGGTCTGGAGATGCTGCGTGAAGCCG > NC_000913/3019340‑3019809 | cTCGCACAACCATTTTTACTCGGGGCTTTTCCGCGGAATTATGGCAAACATCGCCCCTTGCCCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGACGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTCTATCGGCGGTTGGCTAT‑Ccccacttc > 2:806522/1‑235 (MQ=255) aCCATTTTTACTCGGGGCTTTCCCGCGGAATTATGGCAAACATCGCCCCTTGCCCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCa < 2:1358502/239‑1 (MQ=255) aCCATTTTTACTCGGGGCTTTCCCGCGGAATTATGGCAAACATCGCCCCTTGCCCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCa < 1:615674/239‑1 (MQ=255) aCCATTTTTACTCGGGGCTTTCCCGCGGAATTATGGCAAACAGCGCCCCTTGCCCGGATTTCATCCCAACGCTGAAAAATCTCTGGTGGCGGCTCGAGCGCGCCCTTGATGAAGAGGCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCa < 2:268893/239‑1 (MQ=255) aCTCGGGGCTTTCCCGCGGAATTATGGCAAACATCGCCCCTTGCCCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCCCT‑CCCCACATCGC‑GA‑CGCC‑TTTTTtaaa > 1:572312/1‑239 (MQ=255) cTCGGGGCTTTCCCGCGGAATTATGGCAAACATCGCCCCTTGCCCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAg < 1:608539/239‑1 (MQ=255) cGGGGCTTTCCCGCGGAATTATGGCAAACATCGCCCCTTGCCCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCAGTCC‑CCACATTCCGC‑GAGCCCT‑TTTTTTAAAGt > 1:147565/1‑239 (MQ=255) ggggCTTTCCCGCGGAATTATGGCAAACATCGCCCCTTGCCCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTGGCTCT‑CCCCCTTCCCC‑GC‑CCCC‑TTTTTTAAAATTg > 1:480220/1‑239 (MQ=255) tCCCGCGGAATTATGGCAAACCTCGCCCCTTGCCCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTgcg < 1:645639/239‑1 (MQ=255) tCCCGCGGAATTATGGCAAACATCGCCCCTTGCCCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCTCCCCCCTTCCCC‑GC‑CCCA‑TTTTTAAAAATTGGCCtc > 1:336441/1‑237 (MQ=255) gcgGAATTATGGCAAACATCGCCCCTTGCCCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCTGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGcgcgcg < 2:643324/239‑1 (MQ=255) atcatcccAAGCATCGCCCCTTGCCCGTACTTCATCTCAACGCCGAAAAATCTCTGGTGGTGGCTCGTGCCCGCCTCTGATTAAGAGTCGCTCTATTACAGCGGACTGATTTGTACCCTGGCAGCGATTAAGCGCCGATGTTCATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTAT‑CCCCATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGAc < 2:1020656/232‑1 (MQ=255) aTTATGGCAAACATCGCCCCTTGCCCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGAc < 1:1266862/239‑1 (MQ=255) aTTATGGCAAACATCGCCCCTTGCCCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGAc < 1:860337/239‑1 (MQ=255) aTTATGGCAAACATCGCCCCTTGCCCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGAc < 1:115925/239‑1 (MQ=255) aTTATGGCAAACATCGCCCCTTGCCCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGAc < 2:286083/239‑1 (MQ=255) cATCGCCCCTTGCCCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGGCCCTCT‑CCCCACTTCCC‑GG‑CGCA‑CTTTTTTAAATTGGCCCGCGCGCGGTGACCTGTGTTTGaa > 1:145530/1‑239 (MQ=255) cGCCCCGTGCGCGGAATCCAGCGCAACGCTGAAAAAGCGCTGGTGGCGGCTCGATCGCGCACTTGAAGAAGAGTCGCTGTAATACAGCGGACTGATTTGTACTCTGGAAGCGAGTAAGAGTGGATGTACATCGGTTATAGATCGCCATGCCTCTCCGGCGTATAACGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAtcta < 2:1340629/239‑1 (MQ=255) cccTTGCCCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTg < 1:22612/239‑1 (MQ=255) aTTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGGGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTaaca‑a < 1:969440/238‑1 (MQ=255) aTTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTaaca‑a < 1:333550/238‑1 (MQ=255) ctcAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCa < 2:556875/239‑1 (MQ=255) gAAAAATCTCTGGTGGCGGCACGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGGAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TGTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTg < 1:1293771/238‑1 (MQ=255) aaTCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGa < 1:1093766/239‑1 (MQ=255) aaTCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGa < 2:1119850/239‑1 (MQ=255) aaTCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGa < 1:589082/239‑1 (MQ=255) aaTCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGa < 1:430480/239‑1 (MQ=255) aaTCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGa < 1:1308940/239‑1 (MQ=255) aaTCTCTGGGGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGa < 2:1107534/239‑1 (MQ=255) aaTCTCTGATGGCTGCTCGATCGCGCCCTTGATGAAGAGTAGCTCTATTACAGCGGACTGATTTGTCCCCTGGAAGCGATTAAGAGCGGATGTCCATCTGTTATCGATCACCATGCCTCTGCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGa < 2:1068358/239‑1 (MQ=255) aaTCGCTGGGGGCGGCTCGAGCGCGTCCTTGACGAAGAGTCGCGCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGa < 1:859148/239‑1 (MQ=255) tggCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTag < 1:977407/238‑1 (MQ=255) cggcTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTGGCTCT‑CCCCCCTTCTC‑CC‑CTCC‑TTTTTTTAAATTTGGCTGCGCGCGGGGGCCCGT‑TTTTTTACTATTTACCCTCAAA‑ACGGCATCACACAGATGTGGGGAGGTGGaggaga > 2:977407/1‑239 (MQ=255) ggcTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAgaagaa < 1:1285163/239‑1 (MQ=255) ggcTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAgaagaa < 2:550246/239‑1 (MQ=255) gcTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTGGGTCTCCCCCCTTGCCG‑CC‑CCCG‑TTTTTAAAATTTGG‑CTGCGCGCGCAGGCCCTT‑TTTTTAACCACTTACCGCAACACACGCCA‑AAAAGAGCTTCAGGAGGGGGTATGAGaaa > 2:1271450/1‑239 (MQ=255) cGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTtgattgat < 1:1231936/239‑1 (MQ=255) tctATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTaaca‑a < 1:381511/175‑1 (MQ=255) tctATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAg < 2:997020/239‑1 (MQ=255) tATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGa < 1:111187/194‑1 (MQ=255) cGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGGTCT‑CCACAATTCGCGGC‑CCCA‑TTTTTTAAA‑TTGTGCTTCGGGCGCGGTCCCGT‑TTTTTAAATCTTGTCCGTAACA‑AAAGCCTCCAAGAGGTCCAGGAAGGTGTAGAAGAAAAAACCCGTTTTGCCCCTTTGTTtgttgacggggagaca > 2:831626/1‑228 (MQ=255) gACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTGGCTCT‑CCTCACTTCGC‑GG‑CGCC‑TTTTTTTAACATGGGGTGCGGGGGGGGACCCGT‑TTTTTAACTACTGAACCCAAAA‑ACGGGATCAAAAAGATGCAGGGGGGGGGAGAAAAAAAAAACCTGTTCGCCGCCTTGTTTGTTGAGGGGGAGAAAgag > 2:1316219/1‑237 (MQ=255) ttCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGc < 1:597906/239‑1 (MQ=255) ttCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGc < 1:1111813/239‑1 (MQ=255) ggAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGGCGGCTT‑CCCCCCTTCGC‑CG‑CGCC‑TTTTTTAAAAATGGCGTGCGGGCGACGACCCCT‑TTTGTAACTACTGAACCTAAAA‑AAAGCAGCAAAGAGTTGTGGGAAGGGGGAGAAGAAAAAAACCACTTTGCCCCCTTGATTGTTGGGGGGGAGAAAACGACAAACGAGCCgaa > 2:87448/1‑235 (MQ=255) gATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCtggtgg < 1:173111/239‑1 (MQ=255) aTTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCtggtgg < 2:691083/238‑1 (MQ=255) agagCGGATGCAAACCGGTTATCTAGCACCATGCCTCTCCGGCGTAAATGGGCGGGTCGCACG‑CCACATTGCGC‑GA‑CGAATTTTTTAAAAGTTGGCCTGGGCGCGAGGACCTGT‑TTTGAAACTCCTGACCGTAACA‑ACGCCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCTGGTGGaa < 2:147565/237‑1 (MQ=255) cttttctCGATTATCATGTCTCTTAGTCGTTGATCGCCGGGTCCCTCT‑ACACATTGCGC‑GA‑CGCA‑TTGTTAAAAGTTGGCCGGCGCGAGATGACCTGA‑TTTGAAGCTACCGACCTTAACA‑CCGGCAACAAGGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTGAGCCGGTTTGATTCATGGGGCGAAGAAAGCGACAAGCGAGCCGTATCTGGTGGAAGCACCTATCGGTGCTCAc < 2:533883/233‑1 (MQ=255) cGGTTATCGATCCCCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCTGGTGGAAGCACATATCGGTGCTCAc < 1:1103431/239‑1 (MQ=255) cGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCTGGTGGAAGCACATATCGGTGCTCAc < 1:351249/239‑1 (MQ=255) ggTTATCCATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGCCAAGCGAGCCGTATCTGGTGGAAGCACATATCGGTGCTCAcg < 2:841411/239‑1 (MQ=255) aTCGATCACCATGCCTCTCCGGCGTATATCGGCGGGGCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCTGGTGGAAGCACATATCGGTGCTCACGCGcc < 2:640143/239‑1 (MQ=255) gATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCCCT‑CCCCCTTTCCC‑CC‑CGCC‑TTTTTTAAAAATGGGCTGCGCGCGGTGACCTGT‑TTTTTAACTACCGACCGCAAAA‑AAAGCATCCAAAAGGTGGAGGAAGGGGTGGAAGAAAAAAACCGCTTCTCCCCCTTGATTGATTAGGGGGAGGAAAAGAACAACAACCCGGATCTGGTGGGAGGACATATCAGGGCTCCCGCGCCgct > 2:960102/1‑237 (MQ=255) aCCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCTGGTGGAAGCACATATCGGTGCTCACGCGCCGTTTAcc < 1:770124/239‑1 (MQ=255) cATGCCTCTCGGGCGTATAGCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGAA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCTGGTGGAAGCACATATCGGTGCTCACGCGCCGTTTACCGt < 1:992369/239‑1 (MQ=255) tcCGGCGTAGATCGGCGGGTCGCTCT‑CCCCATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCTGGTGGAAGCACATATCGGTGCTCACGCGCCGTTTACCGTGCCGGATg < 2:406966/239‑1 (MQ=255) gccGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TGTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCTGGTGGAAGCACATATCGGTGCTCACGCGCCGTTTACCGTGCCGGATg < 2:1268008/238‑1 (MQ=255) cccGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCTGGTGGAAGCACATATCGGTGCTCACGCGCCGTTTACCGTGCCGGATg < 1:434749/238‑1 (MQ=255) gCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGc < 1:1263726/177‑1 (MQ=255) gTATATCGGCGGTTCGCGCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCTGGTGGAAGCACATATCGGTGCTCACGCGCCGTTTACCGTGCCGGATGCCGGTc < 1:953527/239‑1 (MQ=255) atCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCTGGTGGAAGCACATATCGGTGCTCACGCGCCGTTTACCGTGCCGGATGCCGGTCTGga < 1:596948/239‑1 (MQ=255) tCGGCGGGTCGCTCT‑CCTCATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTAT‑TTTGAAACTACTGACCTTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCTTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCTGGTGGAAGCACATATCGGTGCTCACGCGCCGTTTACCGTGCCGGATGCCGGTCTGgag < 1:570800/239‑1 (MQ=255) ct‑cCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCTGGTGGAAGCACATATCGGTGCTCACGCGCCGTTTACCGTGCCGGATGCCGGTCTGGAGATGCTGCGTGaa > 1:340475/1‑238 (MQ=255) ct‑cCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCTGGTGGAAGCACATATCGGTGCTCACGCGCCGTTTACCGTGCCGGATGCCGGTCTGGAGATGCTGCGTGAAg < 1:1251250/239‑1 (MQ=255) ct‑cCAAATTGCGC‑GT‑CGGT‑TTTTTAAAATGTGGCCTGCTCGCGATGACCTTG‑TTTGATACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTGCTCCCGTTTGATTGATGAGTCGAAGAAAGCGACAAGCGAGCCGTATCTTGTGGAAGCACATATCGGTGCTCACGCGCCGTTTACCGTGCCGGATGCCGGTCTGGAGATGCTGCGTGAAg < 2:499375/239‑1 (MQ=255) cacaTTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCTGGTGGAAGCACATATCGGTGCTCACGCGCCGTTTACCGTGCCGGATGCCGGTCTGGAGATGCTGCGTGAAGCCg > 1:1008459/1‑239 (MQ=255) | CTCGCACAACCATTTTTACTCGGGGCTTTCCCGCGGAATTATGGCAAACATCGCCCCTTGCCCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCT‑CCACATTGCGC‑GA‑CGCA‑TTTTTAAAAGTTGGCCTGCGCGCGATGACCTGT‑TTTGAAACTACTGACCGTAACA‑ACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCTGGTGGAAGCACATATCGGTGCTCACGCGCCGTTTACCGTGCCGGATGCCGGTCTGGAGATGCTGCGTGAAGCCG > NC_000913/3019340‑3019809 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |