Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	3,206,458	T→G	13.2%	intergenic (‑202/‑5)	ttdR ← / → ttdA	transcriptional activator of ttdABT/L‑tartrate dehydratase, alpha subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,206,458	0	T	G	13.2%	227.5 / 4.7	98	intergenic (‑202/‑5)	ttdR/ttdA	transcriptional activator of ttdABT/L‑tartrate dehydratase, alpha subunit
Reads supporting (aligned to +/- strand):  ref base T (17/66);  new base G (12/2);  total (30/68)
Fisher's exact test for biased strand distribution p-value = 4.40e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

TAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTG‑AATAAGTTGACAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATT  >  NC_000913/3206236‑3206693                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                    tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGa                                                                                                                                                                                                                                  <  1:52430/238‑1 (MQ=255) tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGa                                                                                                                                                                                                                                  <  1:589127/238‑1 (MQ=255)        cAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGtaat                                                                                                                                                                                                                           <  1:894721/238‑1 (MQ=255)         aGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGGATTTTTTCAGACAAATACAAAAAA‑ATGG‑G‑GTTG‑‑C‑ACG‑TT‑GAGCGGAAGaaataa                                                                                                                                                                                                                         >  1:875258/1‑239 (MQ=255)          gCTATTCAGCAGCGTTAATTATCCGCAGTTGTGATAAGCACAGTGTATTCCGCAACACATTGCCAGTCCCTGCTCTGGCGCAAGATTCATTCTTATGTGCTCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGGAAAAAATATAGAACCGCATTTGTAGTGGTAGATTGTGGC‑GGTGAAGTTTTCCAGACAAATAC‑AATAA‑CTAG‑A‑GGTG‑CC‑ATG‑AT‑GAGCGAAAGtaataa                                                                                                                                                                                                                         <  2:930485/238‑1 (MQ=255)            tATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGc                                                                                                                                                                                                                       <  2:282520/238‑1 (MQ=255)            caTTCAGCATCGGTAAGTATTCGCAGTTGTGGTAAGCGCGCTGTATTTCGCATAACAATGGCATTCTCTGCTCTGGCGCAATATTCTTTCTTATTGTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCGGGGTCGGAAGAAATATAAAACCACATCGTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCTAGTCAAATAC‑ACAAG‑CTGG‑A‑GTTG‑CT‑ATC‑AT‑GAGCTAAAGtaacgagc                                                                                                                                                                                                                       <  2:1312143/237‑6 (MQ=255)                    aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAgg                                                                                                                                                                                                                 <  2:356970/236‑1 (MQ=255)                    aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAgg                                                                                                                                                                                                                 <  2:57842/236‑1 (MQ=255)                    aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAgg                                                                                                                                                                                                                 <  1:132617/236‑1 (MQ=255)                    aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAgg                                                                                                                                                                                                                 <  1:835962/236‑1 (MQ=255)                    aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAgg                                                                                                                                                                                                                 <  1:719283/236‑1 (MQ=255)                    aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGc                                                                                                                                                                                                                <  1:738001/237‑1 (MQ=255)                      cGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGGATTTTTTCAGACAAATAA‑AAAAA‑ATGG‑A‑GTTG‑CC‑ATG‑GT‑GAGCGAAAGAAATAAGCaaacgacaggg                                                                                                                                                                                                            >  1:740417/1‑230 (MQ=255)                      cGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTTCAGAAAAAAAC‑AAAAA‑ATGG‑A‑GTTG‑CC‑ATG‑AT‑GAGGGCAAGGAAAAAACAAAAAGCaagg                                                                                                                                                                                                            >  1:772923/1‑236 (MQ=255)                      cGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGAGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTTTAGACAAAAAC‑AAAAA‑CAGG‑A‑GTTG‑CC‑ATG‑GC‑GAGGGAAAGAAATAAACAACAGAAAGTg                                                                                                                                                                                                            >  1:251238/1‑239 (MQ=255)                         tAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTG‑aa                                                                                                                                                                                                         <  2:1119944/238‑1 (MQ=255)                         tAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTG‑aa                                                                                                                                                                                                         <  2:688796/238‑1 (MQ=255)                         tAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTG‑aa                                                                                                                                                                                                         <  1:722731/238‑1 (MQ=255)                          aaTTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCGCATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGT‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAAAAGGCAGTG‑aaga                                                                                                                                                                                                       <  2:151113/239‑3 (MQ=255)                            ttATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTG‑AATAAg                                                                                                                                                                                                     <  1:76192/239‑1 (MQ=255)                             tATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTG‑AATAAGt                                                                                                                                                                                                    <  1:1011294/239‑1 (MQ=255)                                  gCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTG‑AATAAGTTGACa                                                                                                                                                                                               <  2:193477/239‑1 (MQ=255)                                       tgtgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTG‑AATAAGTTGACAgag‑a                                                                                                                                                                                          <  1:1030916/238‑1 (MQ=255)                                              aGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTG‑AATAAGTTGACAGAG‑ATTGTCGCt                                                                                                                                                                                  <  2:237923/239‑1 (MQ=255)                                                cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAAATTTTTCAGAAAAATAA‑AAAAA‑AATG‑G‑GGTG‑GC‑ATG‑AT‑TAGCGAAAGGAATAAACAAAAAGAAGGG‑AATAAAATGACAGAG‑Atttttgccaa                                                                                                                                                                                >  1:983174/1‑231 (MQ=255)                                                   aGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGGATTTTTTCAGAAAAAAAC‑AAAAA‑CTTG‑A‑GTTG‑CC‑CTG‑AT‑GAGGGGAAGTAATAAACAAAAGGCAGTG‑AATAAATTGACAGAG‑ATTGttggttaatt                                                                                                                                                                             >  1:503738/1‑230 (MQ=255)                                                     tgtATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGGATTTTTTCAGACAAAAAA‑AAAAA‑ATGG‑A‑GTTG‑GC‑ACG‑AT‑GAGCGGGAGGAATAAGTAACAAGGAGAG‑AAAAAATTGGCAGAG‑ATTTTCTCTTAA‑TTT‑a                                                                                                                                                                         >  1:1225525/1‑239 (MQ=255)                                                       tATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTG‑AATAAGTTGACAGAG‑ATTGTCGCTAAC‑TTT‑Acc                                                                                                                                                                       <  1:824393/239‑1 (MQ=255)                                                           tCGAAAAACTTTGCCATTCCCTGCCTTGGCGCAATTTTCATTCTTATTTTCGCGTTGATTCACAAACTGTTATTTAC‑ATATTCAGGGTGGCAAAAAATAAAAACCCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAAAAAGCAACAGGCAGTG‑AATAAGTTGACAGAG‑TTTGTCGCTAAT‑TTT‑ACCGCCa                                                                                                                                                                   <  2:1225525/239‑1 (MQ=255)                                                           tCGAAAAACATTGCCATCCCCTGCTCTGGCGCAATATTCATTCTTATTGTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATAAAAACCCACATTTTTAGGGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CGGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCAAAAGTAATAAGCAACAGGCAGTG‑AATAAGTTGACAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCa                                                                                                                                                                   <  2:1128342/239‑1 (MQ=255)                                                                 aaCATTGCCATTCCCTGCTCTGGCGC‑ATATTCATTCTTATTTTCGCGTTGATTCACGTACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGGAGTTTTTCCGTGAAATAC‑AAAAA‑CCAG‑A‑GCTG‑GT‑ATG‑GT‑GATAGGGCGTAATAAGCAACAAGGAGAG‑GGTAAAATGAAAGGG‑GTTGTGCCTAAG‑TTT‑ACCGCCATGAtgta                                                                                                                                                            >  2:779950/1‑236 (MQ=255)                                                                   cATTGCCATCCCTTGCTCTGGCGAAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGAAAAAAATATAAACCCACATTTTTAGGGGGAGTTTGGGGC‑GGTAAATTTTTCCAGACAAATAC‑AAAAA‑CGGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTG‑AATAAGTTGACAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCt                                                                                                                                                           <  1:696702/239‑1 (MQ=255)                                                                         cacccctttctctGGCGCATTATATATTCTGATTACCGAGTTGAACAACGAACTGTTAAATGC‑ATATGCCGGGGGGAAAAAAATATAAATCAACATTTGTAGTGGGATGTTGGGGG‑GGTGATTTTAACAAAAAAAAAAA‑AAAAA‑CAGG‑A‑GTTT‑CC‑ATA‑AG‑GCGCTAAAAAAATAAGCAACAGACGGAA‑AAAAAGTATACAGAG‑TTTGCCGTTAAC‑TTT‑ACCGCCATGATTTCTACCCGa                                                                                                                                                     <  2:318866/230‑1 (MQ=255)                                                                         cATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGTTTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAAACAAATAC‑AAAAA‑TTGG‑A‑GTTG‑CC‑ATG‑AT‑AAGCGAAAGTAATAAGCAACAGGCAGTA‑AATAAGTGGAAAGAG‑ATTGTCCCTAAC‑TTT‑ACCGCCATGATTTCTACCCGa                                                                                                                                                     <  1:95797/239‑1 (MQ=255)                                                                             cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAAATTTTTCAGACAAATAC‑AAAAA‑CAGG‑A‑GGTG‑CC‑CTG‑AT‑GAGAGAAAAAAAAAAACAAAACACAGGG‑GAAAAATTTAAAAGG‑AATTTAGCTCAC‑TTT‑ACCGCCCACATTTTTTCCCGaaag                                                                                                                                                  >  2:634911/1‑236 (MQ=255)                                                                                  ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTTCAGGAAAAAAC‑AAAAA‑CTTG‑C‑GTTG‑CC‑ACT‑CT‑TTGTGCAAGGAATAAGCAACAGGCCGAG‑GATAAGATGGCAGAG‑ATTTTCGGCAAA‑TTT‑ACCGCCATGATTTTTACCCGAAAGCCtgtt                                                                                                                                            >  1:156371/1‑237 (MQ=255)                                                                                      ggCGAAATATTATTACTTATTACGGGGTTGATACACGAAATTTAAATTCA‑ATATTCTGGGTGGAAAAAAAGATAAAACCATTTTTTAATTGGGAGTTTG‑GGG‑GGGGAATTTTTACGAAAAAAAGC‑AACAA‑GTGGAA‑GTTT‑CC‑AAG‑AG‑GAGAGAAGTTAAAAGGCAACAGGTAGGA‑AAAAGGTAGACGGAA‑GTTGTCGTAATC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGAc                                                                                                                                         <  2:1329746/238‑1 (MQ=255)                                                                                        cgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTTCCGACAAATAC‑AAAAA‑ATGG‑A‑GGTG‑GC‑CTG‑AT‑GAGAGAAAGTAATAAAAAAAAAGCAGGG‑AATAAATTTAAAGAG‑AATTTCGCCAAA‑TTT‑ACCGCCATGATTTCTACCCGAATGCCCGATGAAgtg                                                                                                                                      >  1:507303/1‑239 (MQ=255)                                                                                        cgaaaTATTCATTCTTATTTTCGGTTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTAAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTG‑AATAAGTTGACAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACgt                                                                                                                                       <  1:1272623/235‑1 (MQ=255)                                                                                         gaaaTATTCATCTTTATTTCGTCGTTGATACACGAA‑TTTTAAATACAATATTCACGGTGACAAAAAATATAAAACCCCATTTTAAGTGGTAGTTCGCGGC‑GGTAATTTTTCCCAAACAAATAC‑AAAAA‑CGGG‑A‑GTTC‑CC‑CTG‑AT‑GAGCGAAAGAAATAAGCACCAGGCAGTG‑AATAAGTTGCCAGAA‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACgtg                                                                                                                                      <  2:561957/236‑1 (MQ=255)                                                                                             ttttcattcTTATTTTCGCTTTTATACACGAACTTTTAATTAC‑ATATTCACGGTGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTAAATTTTTCCAAACAAATAC‑AAAAA‑CGGG‑A‑GTGG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACGGGCGGTG‑AATAAGTTGACAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                 <  2:28948/237‑1 (MQ=255)                                                                                             tatgtattcTTATTGCCTCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCGCATTTTTAGGGGTAGTTTGGGGC‑GGTGAATTTTTCCAGACAAATAA‑AAAAA‑CTGG‑A‑GTTG‑CC‑TTG‑AG‑GAGCGAAAGTAATAAGCAACAGGCAGTA‑AATAAGTTGACAGGG‑ATGGCCGTTACC‑TTT‑TCCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                 <  1:1342860/234‑1 (MQ=255)                                                                                             tatTCATTTTTATTTTCGCGTTGATTCACGAATTGTTAATTAC‑ATATTCAGGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGAAAAATAC‑AAAAA‑CTGG‑A‑GTGG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGAAACAGGCAGTG‑AATAAGTTGACAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                 <  1:7648/239‑1 (MQ=255)                                                                                             tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATT‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTG‑AATAAGTTGACAGAG‑ATTGTCGCTAAC‑TTT‑Acc                                                                                                                                                                       <  1:735171/201‑1 (MQ=255)                                                                                                 cattcTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAAATTTTTCCGACAAATAC‑AAAAA‑ATGG‑A‑GTTG‑CC‑CTG‑AT‑GAGCGGAAGGAATAAAGAACAAGCAGTG‑AAAAAGATGACAGAG‑AATGTCGCCAAA‑TTT‑AACGCCATGATTTTTAACCGAATGCCTGATGACGTGGGGGGTaaa                                                                                                                             >  1:561957/1‑239 (MQ=255)                                                                                                  attcTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTTCAAACAAAAAC‑AAAAA‑ATGG‑A‑GGTT‑CC‑CTG‑AT‑GAGGGAAAATAATAAGCAAAAAGCAAGG‑AATAAATTGTCAGAG‑AATGTCGCTAAC‑TTT‑AACCCCATGCTTTTTACCCGAAAGCCCGGTGACGggggggggaaa                                                                                                                             >  2:1272623/1‑233 (MQ=255)                                                                                                      ttATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTG‑AATAAGTTGACAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaa                                                                                                                        <  1:871887/239‑1 (MQ=255)                                                                                                       tATTTTCGCTTTGATTCACGAACTGTTAATTGC‑ATACTCACGGTGGAAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGTGGG‑GGTGAATTTTTCCAAACAAATAC‑AAAAA‑GTGG‑A‑GTTG‑CC‑TTG‑AG‑GAGCAAAAGTAAAAAGCAACGGGCATTA‑AAAAAGTGAACAGAG‑TTTTTCTCTAAT‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                       <  1:992903/239‑1 (MQ=255)                                                                                                       tATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGGAATTTTTCAGACAAAAAA‑AAAAA‑ATAG‑A‑GGTG‑TC‑AAT‑AT‑GTGCGGAAGTAATAAAAAACACGCAGTG‑AATAAAGTTACAGAG‑ATTGTGGCTAAC‑ATT‑ACCGCCCATATTTTTATCCCCATACCTGATAAGAGGGGGGGTAAACAaaaa                                                                                                                       >  1:883698/1‑239 (MQ=255)                                                                                                       tATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGGGAAATTTTTCAAACAAAAAA‑AAAAA‑AAGG‑A‑GTTT‑GC‑ATT‑GT‑TGGCGGAAAGAATAAACAAAACGCAATGAAAAAAATTGA‑AGAG‑AATGTTGGTAAA‑CTT‑ACCCCCCTAGTTTTTTCCCGAATTCCCGTTCAAGAGGGGGAGAAACAaaaa                                                                                                                       >  2:1293926/1‑239 (MQ=255)                                                                                                         ttttCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAAATTTTCCAAACAAATAA‑AAAAA‑ATGG‑A‑GGTG‑CC‑CTG‑AT‑GAGCGCAAAGAAAAAGCAAAAAGCAGTG‑AATAAGATGAGAGAG‑ATTGTCGGTAAC‑TTT‑TCCGCCCAGAATTCTTCCCCAATGACTCAAGAAGAGGGGGGtaaaataaaaaa                                                                                                                     >  1:1028344/1‑237 (MQ=255)                                                                                                                gTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTTTCCACAAAAAA‑AAAAA‑ATTG‑A‑GTGT‑CC‑ACT‑GT‑TAGCGGAAATAATAAGCAAAACGAAGCG‑AATAAAATGAGAGAG‑AATTTTGTTAAA‑CTT‑TCCGCCAAGATTTCTACCCCGAAACCTGAGGACGTGGGGGGTAAAATAAAACAGCTaaaa                                                                                                              >  1:86550/1‑238 (MQ=255)                                                                                                                              tGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTTCAGACAAAAAA‑AAAAA‑ATGG‑A‑GGTG‑CC‑ATG‑AT‑TAGGGAAAGGAATAAGCAAAAAGCAGGG‑AATTAATTGACAGAG‑ATTGTTTCTAAC‑TTT‑TCCGCCCTGATTTTTACCCCCATGCCTGATGAAGTGGGGGGTAAACTTAAAAAGCTAAAGGATGCCGGAAcac                                                                                                 >  1:1194302/1‑236 (MQ=255)                                                                                                                                ttAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGGGAATTTTTCAAAACAAAAAA‑AAAAA‑TGGG‑G‑GTTG‑‑C‑ATG‑ATGGGGGGAAGGAAAAAAAAAAAAGGCAG‑G‑AATAAATTGAAAGAGAATTTTGGTTAAT‑TTT‑ACCACAATATTTTTTACTGAAATG‑CTGATAGAGTGGGGGGTAAAACAAAAAAGATAAAGGATTCCGaaaaagag                                                                                               >  2:273912/1‑233 (MQ=255)                                                                                                                                ttAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTG‑AATAAGTTGACAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                       <  1:303499/214‑1 (MQ=255)                                                                                                                                   aTTAC‑ATATCCACGGTGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGG‑GGTGAATTTTTCAAGAAAAATAA‑AAAAA‑CGGG‑A‑GTTG‑CC‑ATG‑AG‑GGGCGAAAGTAATAAGCAACGGGAAGTG‑AATAAGTTGAAAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGa                                                                                           <  1:674231/239‑1 (MQ=255)                                                                                                                                         atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTTCAGACAAATAC‑AAAAA‑CTTG‑G‑GTTT‑CC‑ATG‑AT‑GAGCGAAAGAAATAAAAAAAAGGCATTG‑AGTTAAATGACAGCA‑ATTATCGCTTAC‑TTT‑ACCCCCATGATTTTTACCCGAATGCCCTCTGACGTGGTGGGTAAAATAAAAAAGATAAAGGATGCCGAAAAGTAGTCGATgggg                                                                                      >  1:707493/1‑239 (MQ=255)                                                                                                                                         atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAAATTTTTCAGACCAAAAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGGGAAAAGAATAAACAAAAGGCAGTG‑AAAAAGTTGACAGAG‑ATTGTCGCTAAC‑TTT‑ATCGCCACGCTTTCTACCCCAAAGCCTGATGACGTGGGGGGTAAAATAAAAAAGCTAAAAGATGCCCAAACATCGTCCGTgggg                                                                                      >  2:774665/1‑239 (MQ=255)                                                                                                                                          tatTCACGTGTGCAAAAAATATAAAACCTATTTTTTAGTGGGAGTTTGTGGC‑GTTGAATTTTCCCAGACAAAAAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACGGGCAGTT‑AATAAGTTGACAGAG‑ATTGTCTCTACC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                     <  1:480142/239‑1 (MQ=255)                                                                                                                                          tatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTG‑AATAAGTTGACAGAG‑ATTGTCGTTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                     <  1:1166729/239‑1 (MQ=255)                                                                                                                                          tatTCACGGGGGAAAAAAATATAAAACCACTTTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CGGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGAAATAAGCAACAGGCAGTG‑AATAAGTTGACAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                     <  2:772923/239‑1 (MQ=255)                                                                                                                                           atTGACGGTGGCAAAAAATACAAAACCACATTTTTAGTGGTAGTTTGGGGC‑GGTGAATTTTTCCAGACAAATAA‑AAAAG‑CTGG‑A‑GTTG‑CT‑AGG‑AT‑GAGCGAAAGTAATAAGCAAGAGGCAGTG‑AATAAGTTGACAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGaa                                                                                    <  2:86550/239‑1 (MQ=255)                                                                                                                                           atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTTCAGACAAAAAC‑AAAAA‑CTGG‑A‑GGTG‑CC‑ATG‑AT‑GAGCGGAAGTAAAAAACAAAAAGCAGGG‑AATAAATTGACAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCCTGATTTCTACCCGAATGCCCGATGACGTGGGGGGTAAACTAAAAAAACTAAAAGATGGCGAAACGTCGTCGGTggggga                                                                                    >  2:896696/1‑237 (MQ=255)                                                                                                                                           atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTTCAAACAAATAC‑AAAAA‑ATGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAATTAAAAGCAAAAAGCAGTG‑AATAAGATGAGAGAG‑ATTGTCGCTAAC‑ATT‑TACGCCATGCTTTTTAACCGGATACCTGATGAAGGGGGGGGTAAAAAAAAACAGCTAAAGGAGGCCGAAACGGCGTCGCTggggga                                                                                    >  1:48406/1‑237 (MQ=255)                                                                                                                                            tgcagggTGGAAAAAAATATAAAACCACTTGGTTGGGGGTAGTTGGTGGC‑GGTGAATTTTTCAAGAAAAAAAA‑AAAAA‑CGGG‑A‑GTGG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAAGAGGAAGGA‑AGTAGGTTGAAGGAG‑ATTGTCGATAAT‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                     <  1:127005/232‑1 (MQ=255)                                                                                                                                             tCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGGGAAATTTTTCAAACAAAAAA‑AAAAA‑AAGG‑AGGTTG‑CC‑‑TG‑AT‑GAGGGGAAAAAATAAACAACAAGAAAGG‑AATAAGATGATCGAG‑ATTGTCGCCAAC‑ATT‑TCCGCCCCAATTTTTACCCGAAAGGCTGATGACGTTGGGGGGAAAATCAAACCGCTAAAAGAAGCCGAAAAATCGGCGGTTGGGaaaa                                                                                  >  2:191838/1‑239 (MQ=255)                                                                                                                                               tgggTGGAAAAAAATATAAAACCACATGTTTAGTGGGAGTTTGTGGG‑GGTGAATTTTTCAAGACAAATAA‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑GT‑GAGAGAAAGTAATAAGCAACAGGCAGTG‑AATAATTTGACAGAA‑ATTGGCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAAtt                                                                                <  1:301350/237‑1 (MQ=255)                                                                                                                                                 gggggCAAAAAATATAAAACCACATGTTTAGTGGTAGTTTGTGGC‑GATGATTTTTTCCAGAAAAACAC‑AAAAG‑CTGG‑G‑TTTG‑CG‑ATG‑AT‑GGGCCAAAGTAATAAGCAACAGGCAGTG‑AATAAGTGGACAGAG‑ATTGGCGCTAAC‑TTG‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                              <  1:779950/236‑1 (MQ=255)                                                                                                                                                  gggacAAAAAATAAAAAACCCTCTTTTTAGTGGTATTTTGTGGG‑GGTGAAATTTTACAGAAAAATCA‑AAAAG‑CGTG‑A‑TGTG‑CA‑ATG‑AT‑GGGCAAAAATAATAAACATTAGGCAGTT‑AAGAAGTTGACGGAT‑ATTGTCTTTAAC‑TCT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                              <  2:1046192/234‑1 (MQ=255)                                                                                                                                                  ggagaaaaaaaTATAAAACCAAATTTTTAGTGTTATTTTGGGGC‑GGTAAATTTTTCAAGACAAATAA‑AAAAA‑CTGG‑A‑GTGG‑CC‑ATG‑AG‑GAGCAAAAGTAAAAACCAAGAGGAATTA‑AATAAGTTGAAGGAG‑ATTGCCG‑TAACTTTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                              <  2:1028344/233‑1 (MQ=255)                                                                                                                                                   tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAAATTTTTCCCAGAAAAAT‑AAAAA‑ATTG‑A‑GGTG‑CA‑ACG‑AT‑AAGGGAAAGAAATAATTCACAGGCAGGG‑ACTAAGTTGTTAGAG‑AATGTTGCTAAC‑CTT‑ACCGACATTGTTTATACCCGAAAGCCTTATTACGTGGTGGAAAAACTAAAAAACCTAAACGAAGTCCAAACGTGGTCGGTGGGGAAAATTATc                                                                             >  1:1298972/1‑238 (MQ=255)                                                                                                                                                      cAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAAATTTTTCAGAAAAATAA‑AAAAA‑ATGG‑A‑GGTG‑TC‑ATG‑AT‑GAGCGAAAGTAAAAAAAAAAAAGCAGGG‑AATAAGATGACAGAG‑ATTGGCGCTAAA‑TTT‑ACCGCCATGATTTTTACCCGAATGGCTGATGACGTGGGGGGTAAACTAAAACAGCTAAAAGGAGCCCAAAAGTCGTCGATGGGGGAAAATATCTAcc                                                                         >  1:949350/1‑239 (MQ=255)                                                                                                                                                           aaaataAACCCAATTTTTTAGGGTTAGTTTGGGGC‑GGTGAATTTATCAAGAAAAAAAA‑AAAAA‑TTGG‑A‑GTGG‑CT‑ATG‑AT‑GAGCGAAAGTAATAAGCAACGGGCAGTA‑AATAAGACGAGAGGA‑TTTGCCGCTAAT‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                    <  1:429396/236‑1 (MQ=255)                                                                                                                                                           aaTAAAAAACCACATTTTTAGTGGTAGTTTGGGGC‑GGTGAATTTTTCCAGAAAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑AGG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTA‑AATAAGTTAACAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                    <  2:1194302/239‑1 (MQ=255)                                                                                                                                                                       caTTTTTAGTGGTAGTTTGTGGC‑GGTGGATTTTTTCAAACAAAAAC‑AAAAA‑ATTG‑G‑GGTT‑TC‑ATG‑GT‑GAGGGGAAGTAAAAAACAAAAGGCAGAG‑AAAAAATTGAAAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCCTGATTTTTTCCCCCAAGCCTGATGACGGGGGGGGTAAAATAAAAAAACTAAAAGAAGACGAAAAGGCGTCGGTGGGGGAAAATATTTACCACACGATGTTTGacaac                                                        >  2:531321/1‑239 (MQ=255)                                                                                                                                                                                    gtttgggggC‑GGTGAATTTTTCCAGAAAAATAC‑AAAAG‑CTGG‑A‑GTGG‑CC‑ATG‑AT‑GAGCAAAAGTAATAAGCAACAGGCAGTG‑AAAAAGTGGCAAAAG‑TTTGTCCTTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTTCCATACGATGTTCGACAACATGCAAAAAGCGa                                           <  1:88424/232‑1 (MQ=255)                                                                                                                                                                                    atttggtgGC‑GGTGAATTTTTCCAAAAAAATAC‑AAAAC‑CTGG‑A‑GTAT‑CC‑ATG‑AT‑GGACGAAATAAAAAACAAACAGGCATTG‑AATAAGTTATCATAT‑ATTTTCGCTAAT‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                           <  2:707493/234‑1 (MQ=255)                                                                                                                                                                                    aGTTTGTGGG‑GGTAAATTTTCCAAAAAAAATAC‑AAAAA‑CTGG‑A‑GTTG‑‑C‑ATGAAG‑GAGCAAAATTAAAAAGCAACAGGCAGTA‑AATAAGTGAACAGAG‑ATTGTCGCTAAC‑TTG‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                           <  2:1019870/239‑1 (MQ=255)                                                                                                                                                                                    aGTTTGTGGC‑GGTGAATTTTTCCAGACCAATAC‑AAAAA‑CTGG‑A‑GGTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAACAAAAGGCAGTG‑AATAAGATGACAGAG‑ATTGTTGCTAAC‑TTT‑ACCCCCATGCTTTCTACCCGAAAGCCTGATGACGTGGTGGATAAACTAAAAAAGCTAAAGGATGCCGAAAAGTCGTCGGTGGGGAAAAATATCTACCATAAAATGTTTGACAACATACAAAAAACGa                                           >  1:1000310/1‑239 (MQ=255)                                                                                                                                                                                    aGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑TTTG‑CA‑AGG‑AG‑GAGCGAAAGTAAGAAGCAACAGGCGGTG‑AATAAGTTGACAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                           <  2:117489/239‑1 (MQ=255)                                                                                                                                                                                       ttGGGGC‑GGTGAATTTTTCCAGAAAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTG‑AATAAGTTGACAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGAtt                                         <  1:284448/238‑1 (MQ=255)                                                                                                                                                                                          tgGC‑GGTAAATTTTCCCAGACAAATAA‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑AAGCGAAAGAAAAAACCAACAGGCAGTG‑AATAAGTTGACAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGAc                                      <  1:272301/238‑1 (MQ=255)                                                                                                                                                                                               ggTAAATTTTTCCAAAAAAATAA‑AAAAA‑CGGG‑A‑GTTG‑CA‑ATG‑AT‑GAGCAAAAGTAATAAGCAACAGGCAGTA‑AATAAGTTGACAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGa                                  <  1:531321/238‑1 (MQ=255)                                                                                                                                                                                                       tttCAAGAAAAAAAA‑AAAAA‑CTGG‑G‑GTTG‑CC‑ATG‑AT‑GAGCAAAAGAAATAAGCAACAGGAAGTG‑AATAAGTTGACAGGA‑ATTGCCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctg                         <  2:945321/239‑1 (MQ=255)                                                                                                                                                                                                        tttcaaaaaaaaAC‑AAAAAGCTGG‑A‑GTGC‑GA‑ATG‑AT‑GAGAGAAAGGAATAAAAAACAGGCGGTG‑AAAAAGTGGACAGAG‑TGTGTCGTTACC‑TTT‑CCCGCCAGGATTTCGACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctg                         <  2:713947/231‑1 (MQ=255)                                                                                                                                                                                                         acagaaCAAATAC‑AAAAA‑CTGG‑‑‑GTTG‑CCAATA‑AG‑GAGCGAAAGAAATAAGCAACAGGCAGAA‑AATAAGTTAAAAGAG‑ATTGTCGC‑AAC‑TTTAACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctgcc                       <  2:251238/234‑1 (MQ=255)                                                                                                                                                                                                              aaaaaTAA‑AAAAA‑CTAG‑‑‑GTTGCCC‑ATG‑AT‑GAGAAAAATGAATAAGCAACAGGCAGTG‑AATAAGTTGACAGAG‑ATTGTCGTTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCa                  <  2:527294/237‑1 (MQ=255)                                                                                                                                                                                                               aaaaaAC‑AAAAA‑TGGG‑A‑GTTG‑CC‑ATG‑AA‑GAGGAAAAGGAAAAAGCAACGGGAAGTA‑AAAAAGTGAACAGAG‑ATTGTCGCTAAT‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTc                   <  2:59070/236‑1 (MQ=255)                                                                                                                                                                                                                aaaTAC‑AAAAA‑CGGG‑A‑GTTG‑CC‑ATA‑AT‑GAGGAAAAGTAATAAGAAACAGGCAGTA‑AATAAGTTGAAAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAgg                <  1:1293926/239‑1 (MQ=255)                                                                                                                                                                                                                 aaTAA‑AAAAC‑CTGG‑A‑GTGG‑CC‑ATG‑AG‑GAGCGAAAGAAATAAGAAACAGGCAGTG‑AAAAATTTGAAAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGa               <  2:949350/239‑1 (MQ=255)                                                                                                                                                                                                                        aaaa‑CTGG‑A‑GTTG‑CC‑AGG‑AT‑GAGCAAAAATAATAAGCAAGAGGCAGTG‑AATAAGTTGACAGAG‑ATTGTCGCTACT‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgg         <  2:507303/239‑1 (MQ=255)                                                                                                                                                                                                                        aaaa‑CGGG‑A‑GTTT‑CC‑AGG‑AG‑GAGCAAAATTAATAAGCAACAGGCAGTA‑AAAAAGTTGACAGAG‑ATTGTCGCTAAC‑TTA‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgg         <  1:509066/239‑1 (MQ=255)                                                                                                                                                                                                                          aa‑CTGG‑A‑TTGG‑CC‑ATG‑AT‑GAGCAAAAGTAAAAAGCAAAAGGAAGTG‑AATAAGTTGAAAGGT‑ATGGCCGCTAAT‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg       <  1:981200/239‑1 (MQ=255)                                                                                                                                                                                                                          aa‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTA‑AATAAGTTGACAGAG‑ATTGTCGCTACC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg       <  2:792659/239‑1 (MQ=255)                                                                                                                                                                                                                          aa‑CGGG‑T‑GTGG‑CC‑ATG‑AT‑GAGGAAAAATAATAAACAACAGGCAGTG‑AATAAGTTGAAGGAG‑ATTGCCGTAAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg       <  2:395858/239‑1 (MQ=255)                                                                                                                                                                                                                           a‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTG‑AATAAGTTGACAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACGCCGGGga      >  1:798271/1‑239 (MQ=255)                                                                                                                                                                                                                                g‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTG‑AATAAGTTGACAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGAtt  >  2:204027/1‑239 (MQ=255)                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                    TAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTCCAGACAAATAC‑AAAAA‑CTGG‑A‑GTTG‑CC‑ATG‑AT‑GAGCGAAAGTAATAAGCAACAGGCAGTG‑AATAAGTTGACAGAG‑ATTGTCGCTAAC‑TTT‑ACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATT  >  NC_000913/3206236‑3206693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑