Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 284,003 | A→G | 15.3% | E268G (GAG→GGG) | yagF → | CP4‑6 prophage; dehydratase family protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 284,003 | 0 | A | G | 15.3% | 160.8 / 2.4 | 73 | E268G (GAG→GGG) | yagF | CP4‑6 prophage; dehydratase family protein |
Reads supporting (aligned to +/- strand): ref base A (29/29); new base G (8/4); total (40/33) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.53e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TCGGGGAAGACGCGGGCAAGGTGCAGACCATCGGCGCGCGTTTCGCCAACCACGAACTCTCCCTGCAGGAGGCCGCCGAACTGGGCTGTCGCGCCTGCGCCTCGCCGGGCGGCGGGTGTCAGTTCCTCGGCACGGCGGGCACCTCGCAGGTGGTCGCGGAGGCGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATCAACCGTAAAGTGCCGCGTCTGGTGAGCGTGCT > NC_000913/283781‑284240 | tCGGGGAAGACGCGGGCAAGGTGCAGACCATCGGCGCGCGTTTCGCCAACCACGAACTCTCCCTGCAGGAGGCCGCCGAACTGGGCTGTCGCGCCTGCGCCTCGCCGGGCGGCGGGTGTCAGTTCCTCGGCACGGCGGGCACCTCGCAGGTGGTCGCGGAGGCGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGGGTGGCTGGGGGA‑cccccgcccggcg > 1:422805/1‑234 (MQ=255) gcgGGCAAGGTGCAGACCATCGGCGCGCGTTTCGCCAACCACGAACTCTCCCTGCAGGAGGCCGCCGAACTGGGCTGTCGCGCCTGCGCCTCGCCGGGCGGCGGGGGTCAGTTCCTCGGCACGGCGGGCACCCCGCCGGGGGGCGCGGAGGCGCTGGGGCCGGGGCCGCCGCCCTCCCCCCCGGCGCCGCCCGGGCCGGCGGTGTGGCCGGCGATGCGCCC‑CCACGCGGCGCCCCCgg > 2:546884/1‑238 (MQ=255) ggCAAGGTGCAGACCATCGGCGCGCGTTTCGCCAACCACGAACTCTCCCTGCAGGAGGCCGCCGAACTGGGCTGTCGCGCCTGCGCCTCGCCGGGCGGCGGGTGTCAGTTCCTCGGCACGGCGGGCACCTCGCAGGTGGTCGCGGAGGCGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGGGAT‑CGCCCCCCCGTCGGCGCCCGCGGTcc > 1:1314796/1‑237 (MQ=255) ggTGCAGACCATCGGCGCGCGTTTCGCCAACCACGAACTCTCCCTGCAGGAGGCCGCCGAACTGGGCTGTCGCGCCTGCGCCTCGCCGGGCGGCGGGTGTCAGTTCCTCGGCACGGCGGGCACCTCGCCGGGGGTCGCGGAGGCGCTGGGGCTGGCGCCGCCGCACTCCGCGCCGGCGCCGTCCCGGCCGGCGGGGGGGGTGGGGAG‑CCCCCGCCCGTGGCCGCGCGCGGGGAgcgcgc > 2:1396126/1‑239 (MQ=255) ccATCGGCGCGCGTTTCGCCAACCACGAACTCCCCCTGCAGGAGGCCGCCGAACTGGGCTGTCGCGCCTGCGCCTCGCCGGGCGGCGGGTGTCAGTTCCTCGGCACGGCGGGCACCTCGCAGGTGGTCGCGGAGGCGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGc < 1:483927/239‑1 (MQ=255) cGGCGCGCGTTTCGCCAACCACGAACTCTCCCTGCAGGAGGCCGCCGAACTGGGCTGTCGCGCCTGCGCCTCGCCGGGCGGCGGGTGTCAGTTCCTCGGCACGGCGGGCACCTCGCAGGGGGTCGCGGGGGCGCTGGGTCTGGCGCTGCCGCCCTCCGCGCCGGGGCCGTCCGGGCCGGCGGGGGGGCGGGAGAG‑TGGCCCCCCGGCCGCGGCCGGGGTCAGCCGGCCGGGTTGCcgcg > 2:171358/1‑239 (MQ=255) cGGCGCGCGTTTCGCCAACCACGAACTCTCCCTGCAGGAGGCCGCCGAACTGGGCTGTCGCGCCTGCGCCTCGCCGGGCGGCGGGTGTCAGTTCCTCGGCACGGCGGGCACCTCGCAGGGGGTCGCGGAGGCGCTGGGTCTGGCGCTGCCGCACCCCGCGCTGGCGCCGTCCGGGCCGGCGGGGTGGCTGGGGGT‑CGCCCGCCCCGCCGCGCGCCCGGGCAGCCGGCCGGGTAGCcccg > 2:1208479/1‑239 (MQ=255) gcgcgTTTCGCCAACCACGAACTCTCCCTGCAGGAGGCCGCCGAACTGGGCTGTCGCGCCTGCGCCTCGCCGGGCGGCGGGTGTCAGTTCCTCGGCACGGCGGGCACCTCGCAGGTGGTCGCGGAGGCGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCAt < 1:171358/239‑1 (MQ=255) cgTTTCGCCAACCACGAACTCTCCCTGCAGGAGGCCGCCGAACTGGGCTGTCGCGCCTGCGCCTCGCCGGGCGGCGGGTGTCAGTTCCTCGGCACGGCGGGCCCCTCGCCGGTGGGCCCGGCGGGGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCCGGCGGTGTGGCTGGCGGT‑CTCCCCCCCCTCGCCCCGCGCGGTCCGCGGGCTGGGTAGCcgcgccgccc > 2:773026/1‑232 (MQ=255) tacGCCACCCGCGAGCTCTCCCGGCAGGAGGCCGCCGGACGGGGCGGTCGGGCCGGGCCCTGGCGGGGGGGGGGGGGTCGGTTCCTGGGCACGGCGGGCACCTCGCAGGGGGTCGGGGGGGCGCTGGGTCTGGGGCTGCCGCGCCCCGCGCGGGCGCCGTCCGGGCGGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATcaccac < 2:709824/237‑1 (MQ=255) gAACTCTCCCTGCAGGAGGCCGCCGAACTGGGCTGTCGCGCCTGCGCCTCGCCGGGCGGCGGGTGTCAGTTCCTCGGCACGGCGGGCACCTCGCAGGTGGTCGCGGAGGCGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGGGCTGGGTAGCCGCGGCATCACCCCGCGGGGGATcc > 1:624608/1‑238 (MQ=255) aCTCTCCCTGCAGGAGGCCGCCGAACTGGGCTGTCGCGCCTGCGCCTCGCCGGGCGGCGGGTGTCAGTTCCTCGGCACGGCGGGCACCTCGCAGGTGGTCGCGGAGGCGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCctct < 1:968830/239‑1 (MQ=255) cccTGCAGGAGGCCGCCGAACTGGGCTGTCGCGCCTGCGCCTCGCCGGGCGGCGGGTGTCAGTTCCTCGGCACGGCGGGCACCTCGCCGGGGGGCGCGGAGGCGCTGGGGCTGGGGCTGCCGCACTCCCCGCTGGCGCCGTCCGGGCCGGCGGGGGGGGTGGGGGT‑AGGCCGCCCCGCGGCCGGCGCGGGCAGCGGGCGGGGCGGCCGCGGCCGCACCCCCCGGGGGATCCCCCCCggt > 2:1039107/1‑237 (MQ=255) agggggCCGCCGAGGGGGGCTGCCGCGCGCGCGCCTGGCCGGGCGGCGGGTGTCGGTCCCCCGGCACGGCGGGCCCCCCGCAGGTGGTCGCGGGGGCGCGGGGTCTGGCGCTGCCGCGCTCCGCGCTGGCGCCGTCCGGGCAGGCTGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGc < 2:103982/238‑1 (MQ=255) gccgccGAACTGGGCTGTCGCGCCTGCGCCTCGCCGGGCGGCGGGTGTCAGTTCCTCGGCACGGCGGGCACCTCGCAGGGGGTCGCGGAGGCGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGGGGGGCTGGAGGT‑CGCCCCCCAGGCGGGGCGCGCGGGCGGGCAGCCGGATAGCCGCGGCCCCCCCCCGCCGGGGATCCTCTCCGCTAAACCCCTCgc > 2:1236664/1‑238 (MQ=255) cgACCTGGGCTGTCGCGCCTGCGCCTCGCCGGGCGGCGGGTGTCAGTTCCTCGGCACGGCGGGCACCTCGCAGGTGGTCGCGGAGGCGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAAcg < 1:1236664/239‑1 (MQ=255) tCGCGCCTGCGCCTCGCCGGGCGGCGGGTGTCAGTTCCTCGGCACGGCGGGCACCTCGCAGGTGGTCGCGGAGGCGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGGGAT‑CCCCCCCCCGTCGGCGCGCGCGGGCAGCCGGCTGGGGAGCCGCGGCATCCCCACCCGGGGTATCCCCTCCCCTAAAGCCCTCCAAAAcccggaggggaac > 2:798870/1‑229 (MQ=255) tCGCGCCTGCGCCTCGCCGGGCGGCGGGTGTCAGTTCCTCGGCACGGCGGGCACCTCGCAGGTGGTCGCGGAGGCGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGGGGGGCTGGGGAA‑CGCCCGCCCGGCGGCCCGCGCGGGCCGCGGGCTGGGGAGCCGCGGCCTCCCCCCCCGGGGGATCCTCTCCCATAAAAACATCGAAAAcccgggggggctc > 2:1317052/1‑229 (MQ=255) ctgcccctCGCCGGGCGGCGGGTGTCAGTTCCTCGGCACGGCGGGCACCTCGCGGGTGGTCGCGGGGGCGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACgcgg < 1:1317052/239‑1 (MQ=255) cGGGCGGCGGGTGTCAGTTCCCCGGCACGGCGGGCACCTCGCAGGTGGTCGCGGAGGCGCGGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCggcggc < 1:1208479/239‑1 (MQ=255) gggggTGTCGGTTCCTCGGCACGGCGGGCCCCTCGCAGGTGGTCGGGGAGGCGCGGGGTCGGGCGCGGCCGCACTCCGGGCTGGCGCGGTCCGGGGAGGCGGGGGGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTccac < 1:1496020/236‑1 (MQ=255) gggggTGTCGGTTCCCGGGCACGGCGGCCCCCTCGCGGGGGGCCGCGGGGGCGCTGGGTCTGGCGCGGCCCCACCCCGCGCTGGCGCCGCCGGGGCAGGCGGTGTGGCTGGAGAC‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTccac < 2:624608/236‑1 (MQ=255) gcggGTGTCAGTTCCTCGGCCCGGCGGGCCCCTCGCAGGTGGTCGCGGAGGCGCTGGGTCTGGCGCTGCCGCCCTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTccac < 1:79901/238‑1 (MQ=255) gtCAGTTCCTCGGCACGGCGGGCACCTCGCAGGTGGTCGCGGAGGCGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGGGAT‑CGCCCGCCCGTCGGCGCGCGCGGGCAGCGAGCTGGGTAGCCGCGGCATCCCCCCGCGGGGGATCCCCTCCCCGAAAACCCCCGAAAACACGAAGGGGGTCCCCGCGGGGGTCGGCGGGGCCACCAActt > 2:1162061/1‑238 (MQ=255) gtCGCGGAGGCGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGTTATCCTCTCCGATAAAGCCATCGAAAACGAGATGGTGATCCACGCGGCGGTCGGCGGCTCCACCAATTTACTGCTGCGCATTCCGGCCCTCGCCCACGGGGCcgg > 2:1019922/1‑239 (MQ=255) cgcgGAGGCGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGcggcgg > 2:185828/1‑236 (MQ=255) cgcgGAGGCGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑AGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCCATAAAGCCATCGAAAACGCGGTGGTGATCCACGCGGCGTTCGGCGGCTCCCCCCATTTACTGCTGCACCTTCCGGCCATCGCCCCCGcggcgg > 2:1468621/1‑236 (MQ=255) ggggCGCTGGGTCGGGCCCGGCCGCACCCCGCGCTGGCGCCGTCCGGGCGGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCa < 1:773026/236‑1 (MQ=255) gAGGCGCTGGGTCTGGCGCTGCCGCCCTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAC‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCa < 1:798870/238‑1 (MQ=255) gAGGCGCTGGGTCTGGCGCGGCCGCACTCGCGGCTGGCGCCGGCCGGGCAGGCGGTGTGGTTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCa < 1:1529696/238‑1 (MQ=255) ggCGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAAAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGGAAGCCGCGGCCTCACCACGCGGGGAATCCTCTCCGATAAAGCCATCGCAAACGCGGTGGTGGTCCACGCGGCGTTCGGCGGCGCCACCAATTTACAGCTGCACATTCCGGCCATCGCCCCACCGGCGGGCTTCagag > 2:1165975/1‑236 (MQ=255) ggtggggCGCCGCCGCCCCCCGCGCTGGCGCGGCCCGGGCGGGCGTGGTGGCGGGAGCT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCgg < 2:1382210/233‑1 (MQ=255) tGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCCCCACGCGGGATATCCTCTCCGATAAAGCCATCGCAAACGCGATGGTGATTCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACCCCGCGGGCAGCACG‑ATCCCGGACGtt > 2:176331/1‑239 (MQ=255) tGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGtt > 1:1382210/1‑239 (MQ=255) tGCCGCACTCCGGGCGGGCGCCGCCCGGGCGGCGGGGGGGGCGGGGCAC‑GGCCCGCCCGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCa < 2:999992/238‑1 (MQ=255) ccGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGTGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCCGGATAGCCGCGGCATCACCACGCCGGATATCCTCTCCGATAAAACCATCGAAAACGCCATGGTGAACCCCGCGGCGTTCGGCGGCCCCACCAATTTACTGCTGCCCACTCCGTGCATCGCCCACGCCGCGGGCCTCATGAACCCCGGACGtgaccaatg > 2:397003/1‑231 (MQ=255) ccGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGCGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGCTAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGCCCCTCCCCCCCCCGGCGGGGCGCACC‑ATCCCGGACGGTGAGcccac > 2:1162077/1‑235 (MQ=255) ccGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCCTCGCCCACGCGGCGGGCTGCCCG‑ATCCCGGCCGTTTGGCAccg > 2:1167506/1‑237 (MQ=255) ccGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCCCG‑ATCCCGGCCGTTGGGCACTg > 2:1093720/1‑239 (MQ=255) ccGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGGCGGTGAGCACtc > 2:1181412/1‑238 (MQ=255) gCACTCCGCGCTGGGGCCGTCCGGGCAGGCGGTGTGGCGGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGa < 1:1468621/239‑1 (MQ=255) cTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGAcgc > 2:1102353/1‑239 (MQ=255) cgcgCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCCGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCCCCCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACgcgc > 2:1407248/1‑238 (MQ=255) cgcgCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACgcgc > 2:352500/1‑238 (MQ=255) gcgtgggCGCCGTCCGGGCGGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCAt < 1:1162061/234‑1 (MQ=255) gcgcTGGCGCCGCCGGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCAt < 1:1158316/239‑1 (MQ=255) cgcTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCCCCAATTTACTGCTGCACATTCCGGCCATCGCCCCCCCGGCGGGCTGCCCG‑ATCCCGGACGTTGAGCACTGGACGCGCATc > 2:546239/1‑239 (MQ=255) cgcTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATc > 1:1264359/1‑239 (MQ=255) cgcTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATc > 2:664826/1‑239 (MQ=255) cgcTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAAAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGCGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGGTAAAGCCATCGGAAACGCGAACGGGATCCACGCGGCGATCGGCGGCCCCACCAATTTACCGCTGCACCTTCCGGCCATCCCCCACGCAGCCGGCTGCACG‑ATCCCGGCAGGTGAGCACtcggagggcatc > 2:1385438/1‑228 (MQ=255) cgcTGGCGCCGGCCGGGCAGGGGGTGGGGCGGGGGAC‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCAt < 1:763975/238‑1 (MQ=255) gcgggCGCCGGCCGGGCGGGGGGGGTGGCGGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATc < 1:841098/235‑1 (MQ=255) gcgcCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCCCGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCCCATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACCCGCATCAACCg > 1:309916/1‑239 (MQ=255) gcgcCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGCGCACTGGAcgccgcacaaccg > 2:1083339/1‑229 (MQ=255) gcgcCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATCAACCg > 1:1205885/1‑239 (MQ=255) cgcCGTCCGGGCAGGCGGTGTGGCTGGAGGT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGCCGTTGAGCCCTGGACGCGCATCACCCGt > 2:135664/1‑239 (MQ=255) cgcCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGGGGGCTGCACG‑CTCCCCGGCGGTGAGCACTGGAAGCGCATCAACCGt > 2:856101/1‑239 (MQ=255) cgcCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATCAACCGt > 1:1173194/1‑239 (MQ=255) gcggTCGGGGCGGGCGGTGTGGCGGGAGTA‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATCAACCGTa < 1:1067960/236‑1 (MQ=255) ccGTCCGGGGGGGGGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATCAACCGTa < 1:1298599/238‑1 (MQ=255) ccGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGGGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGCCGCGCCTCAACCCTaa > 1:601513/1‑239 (MQ=255) ccGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATCAACCGTAAAGt < 1:185828/238‑1 (MQ=255) gggggcggCGGTGGGGCGGGGGAC‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATCAACCGTAAAGTGc < 1:712152/233‑1 (MQ=255) ggggcgggcGGTGGGGCGGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATCAACCGTAAAGTGc < 1:546239/238‑1 (MQ=255) cgggcgggGGGGGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATCAACCGTAAAGTGc < 1:1019922/239‑1 (MQ=255) cGGGCAGGCGGTGTGGCTGGGGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATCAACCGTAAAGTGc < 1:550614/239‑1 (MQ=255) cGGGCAGGCGGGGGGGCTGGAGAT‑CGCCCGCCAGGCGGCGCGCGCGGGCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATCAACCGTAAAGTGc < 2:826936/239‑1 (MQ=255) gCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATCAACCGTAAAGTGCcg < 1:1093720/238‑1 (MQ=255) cGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATCAACCGTa > 1:513208/1‑225 (MQ=255) gtgGCTGCAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATCAACCGTAAAGTGCCGCGTCTGGTGa < 1:839297/239‑1 (MQ=255) gtgGCGGGAGAG‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCGCCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATCAACCGTAAAGTGCCGCGTCTGGTGa < 1:397003/239‑1 (MQ=255) tgGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGGGCTGGATAGCCGCCGCATCACCCCGCGGGATATCCTCTCCCATAAAGCCATCGAAAACGCGGTGGTGATTCACGCGGCGTTCCGCGGACCCACCAATTTACCGCTGCACATTCCGGCCATCGCCCACCCGCCGGGCGGCACG‑AGCCCGCACGGTGGGCACTCGACGAGCAACAACCGGCAAGGTCCGCGCCCGGTGa > 2:1231404/1‑238 (MQ=255) tgGCTGGAGAT‑CCCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATCAACCGTAAAGTGCCGCGTCTGGTGa < 1:1113490/238‑1 (MQ=255) agaT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATCAACCGTAAAGTGCCGCGTCTGGTGAGCGtgct < 1:1102353/238‑1 (MQ=255) | TCGGGGAAGACGCGGGCAAGGTGCAGACCATCGGCGCGCGTTTCGCCAACCACGAACTCTCCCTGCAGGAGGCCGCCGAACTGGGCTGTCGCGCCTGCGCCTCGCCGGGCGGCGGGTGTCAGTTCCTCGGCACGGCGGGCACCTCGCAGGTGGTCGCGGAGGCGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGAT‑CGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACG‑ATCCCGGACGTTGAGCACTGGACGCGCATCAACCGTAAAGTGCCGCGTCTGGTGAGCGTGCT > NC_000913/283781‑284240 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |