Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 599,612 T→G 20.1% V300G (GTG→GGG)  cusA → copper/silver efflux system, membrane component

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913599,6120TG20.1% 330.8 / 15.2 139V300G (GTG→GGG) cusAcopper/silver efflux system, membrane component
Reads supporting (aligned to +/- strand):  ref base T (21/84);  new base G (29/3);  total (52/87)
Fisher's exact test for biased strand distribution p-value = 4.15e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 140 total aligned reads displayed.

ACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTGGGGTTGTGTATTGCTTTTATT  >  NC_000913/599382‑599850
                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                    
aCTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGTGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATcgccg                                                                                                                                                                                                                                              <  1:1578768/239‑1 (MQ=255)
      ggaagcggaaTATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑g                                                                                                                                                                                                                                      <  2:1677846/238‑1 (MQ=255)
            ggaaTATATGGGGCGCGCAAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAAGGGGGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGAc                                                                                                                                                                                                                               <  2:1046547/238‑1 (MQ=255)
              aaTATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGCTTCGGCAAAAACGCCCCGGA‑AGGGGTCGCCG‑CC‑GT‑GAA‑GGGCaa                                                                                                                                                                                                                             >  2:1512533/1‑238 (MQ=255)
                tatatGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATcgccg                                                                                                                                                                                                                                              <  1:1728691/223‑1 (MQ=255)
                tatatGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACaa                                                                                                                                                                                                                             <  1:1218616/236‑1 (MQ=255)
                     ggTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGaaa                                                                                                                                                                                                                     <  1:141735/239‑1 (MQ=255)
                     ggTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATACTGGGGGCCGGGCAAAACGCCCGAGA‑AGGGATCGCCG‑CC‑GG‑GAG‑GGGGAAACtcggaa                                                                                                                                                                                                                     >  1:502621/1‑234 (MQ=255)
                      gTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGaaa                                                                                                                                                                                                                     <  1:811005/238‑1 (MQ=255)
                       tGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGAGCCTGCGGTCCGGCAAAAACGCCCCACG‑AGGGATCGCCC‑GC‑GA‑GAC‑GGACAAACTGGAAACg                                                                                                                                                                                                                   >  1:1076964/1‑239 (MQ=255)
                        gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTTATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGGTTCCGCGATCCCGCCAAAAAACCCGGGG‑AGGAGGTGCCC‑GC‑GT‑GAA‑GGGCAAACAGGGAACg                                                                                                                                                                                                                   >  2:732149/1‑238 (MQ=255)
                        gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGATCCTGCGATCCGGCAAAAACGCCCGCGA‑AGTGATCGCCG‑CC‑GT‑GGA‑GGGCAAACTGGGAACg                                                                                                                                                                                                                   >  1:31164/1‑238 (MQ=255)
                        gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑GGCGGTTGCCG‑CC‑GTGGAG‑GGACAAACGGGaaca                                                                                                                                                                                                                    >  2:94481/1‑236 (MQ=255)
                        gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATCCTGCGATCCGGCAAAAACGCCCGAGG‑AGTGATCGCCG‑CC‑GC‑GAA‑GGCCAAAATGGAAAc                                                                                                                                                                                                                    >  1:206837/1‑237 (MQ=255)
                        gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGGTTCGGCCAAAAACCCCGCGA‑AGGGGACGCCG‑CC‑GG‑GGA‑GGGCAAACTGGAAAc                                                                                                                                                                                                                    >  1:1062310/1‑237 (MQ=255)
                        gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGATCCGGCAAAAACGCCCGAGG‑AGGGATCGCCG‑CC‑GG‑GGA‑GGAAAAACCGGAGACg                                                                                                                                                                                                                   >  1:461873/1‑238 (MQ=255)
                        gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGGTCCGGCGAAAACACCCGGGA‑AGGGGTCGCCG‑CC‑GT‑GGC‑GGAGAAACCGGaaga                                                                                                                                                                                                                    >  2:233284/1‑235 (MQ=255)
                        gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGGGATCGCCG‑CC‑GC‑GAA‑GGGGAAACTGGAAACg                                                                                                                                                                                                                   >  1:683163/1‑238 (MQ=255)
                         cgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTACTGCGGTTCGGCAAAAACGCCCGAGAGAGGGAT‑GCCG‑CCGGT‑GAG‑GGCCaaatgggcaagcg                                                                                                                                                                                                                  >  2:387337/1‑229 (MQ=255)
                          gcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGATCCCGCGATCCGGGAAAAACGCCCGGGG‑AGGGATACCCC‑CC‑GT‑GGA‑GGGCAAAACGGGAAAGCTg                                                                                                                                                                                                                >  1:700092/1‑239 (MQ=255)
                          gcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTTCGATCCGGCAAAAACGCCCCAGA‑AGTGATCGCCG‑CC‑GG‑GAAGGGACAAA‑TGGAAACGCTg                                                                                                                                                                                                                >  1:1600093/1‑239 (MQ=255)
                                 cGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGAGCCTGCGGTCCCGGAAAAAAACCCGCGG‑AGTGAGCGCGC‑CC‑GG‑GAA‑GGACAAAAAGGAAACACTGaaaaaga                                                                                                                                                                                                         >  2:1475469/1‑236 (MQ=255)
                                    ttATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCAAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAagtagt                                                                                                                                                                                                       <  1:578597/237‑1 (MQ=255)
                                                 cTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGGTCCGGGAAAAACACCCCAGA‑AGGGGTCGCCG‑CC‑GG‑CGA‑GGACAAAACGGAAACACCGAAAAAGAGTCCGCCGGGAGGCgg                                                                                                                                                                                         >  2:1714359/1‑238 (MQ=255)
                                                  tCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTg                                                                                                                                                                                        <  1:629453/239‑1 (MQ=255)
                                                   cgacgaCTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGGTCCGGCAAAAACGCCCGAGA‑AGGGAGCGCCG‑CC‑GT‑GGA‑GGACAAAATGGAAAAGCTGCAAAGTAGTCTGCCGGAAAGGGTgg                                                                                                                                                                                       >  1:770347/1‑239 (MQ=255)
                                                      cgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGgag                                                                                                                                                                                     <  2:1037809/238‑1 (MQ=255)
                                                          tttAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGt                                                                                                                                                                                <  1:899314/239‑1 (MQ=255)
                                                            tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTa                                                                                                                                                                              <  1:695131/239‑1 (MQ=255)
                                                            tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTa                                                                                                                                                                              <  1:625740/239‑1 (MQ=255)
                                                            tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTa                                                                                                                                                                              <  1:143782/239‑1 (MQ=255)
                                                            tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTa                                                                                                                                                                              <  1:1558156/239‑1 (MQ=255)
                                                            tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTa                                                                                                                                                                              <  2:1269587/239‑1 (MQ=255)
                                                            tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTa                                                                                                                                                                              <  1:1508260/239‑1 (MQ=255)
                                                            tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGGGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACGAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTa                                                                                                                                                                              <  2:916735/239‑1 (MQ=255)
                                                            tAATCACAGCGTTTTAAAAGCCAGGGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCGGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACGAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTa                                                                                                                                                                              <  1:664540/239‑1 (MQ=255)
                                                                   aTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGGTCCGGCAAAAAAGCCCGAGG‑AGGGATCGCCG‑CC‑GG‑GAA‑GGACCAACTGGGAAAGCTGGAAAGGAGGCCGCCGGAAGGCGTGGGGGTAGGTA‑ACAC‑At                                                                                                                                                                      >  1:412437/1‑238 (MQ=255)
                                                                            aaaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGcag                                                                                                                                                            <  1:507038/239‑1 (MQ=255)
                                                                            aaaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGcag                                                                                                                                                            <  1:40267/239‑1 (MQ=255)
                                                                              aGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGcagcc                                                                                                                                                          <  1:235472/239‑1 (MQ=255)
                                                                              aGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGcagcc                                                                                                                                                          <  1:992869/239‑1 (MQ=255)
                                                                              aGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGcagcc                                                                                                                                                          <  1:94481/239‑1 (MQ=255)
                                                                              aGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGcagcc                                                                                                                                                          <  1:1475469/239‑1 (MQ=255)
                                                                                          gggCTTGCCCGTTTATCGGGGCGAAGTTGCGAAGGGCCAGATTGGCCCGGAGATGCGCCGGGGGATTGCGAAACAAAACGGCGAAGGCGAAGGGGCTGGGGGGGTGGTGATCCTGCGAATCGTCAAAAACGGCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGGCAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGTCAGCTCATGGAcc                                                                                                                                              <  2:1415931/238‑1 (MQ=255)
                                                                                           ggCGGGCCCGTTTAGCTGCGCGATGTTGCGAAGGTCCAGATTGGCCGGGAGAGGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGGGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACcg                                                                                                                                             <  2:583771/239‑1 (MQ=255)
                                                                                              gTGCCCGTTTATCTGCGCGATGTTGCGAAGGCCCAGATTGGCGCGGAGATGCGCCGGGGCAGTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGGGATCTTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCgcgc                                                                                                                                          <  2:1694691/239‑1 (MQ=255)
                                                                                                    gTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAagtagt                                                                                                                                                                                                       <  1:880864/174‑1 (MQ=255)
                                                                                                                  tGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACcgcg                                                                                                                                           <  1:1059170/218‑1 (MQ=255)
                                                                                                                        gAAGGGCGAGATGGGCCCGGAGATGCGTCGGGGCATTGCCGAACTAAACGGCGAAGGCGAGGTGGCGGGCGGGGTGGTGATCCGGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGc                                                                                                                <  1:1217975/239‑1 (MQ=255)
                                                                                                                            gTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGGGATCCTGCGGTCCCGCAAAAACGCCCGCGA‑AGGGATCGCCG‑CC‑GT‑GAA‑GGGGAAACTGGAAACGCGGGAAAGAAGTCTGCCGGAAGGGGGGGAGAGAGTTA‑CAAC‑AAAAGATCGCAGCCCGCTCATATACCGCGCCCCCGACCACCCCACCGGCAAGCTTCTggg                                                                                                            >  2:1154965/1‑238 (MQ=255)
                                                                                                                            gTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGATCCGGCAAAAACGCCCGCGA‑AGGGATCGCCG‑CC‑GG‑GAA‑GGACAAAATGGAAACGCTGAAAAGAAGGTTGCCGGGAGGGGGGGAGATAGTTA‑AAAC‑ATACGGACGCCGCCAGCTCATTTACCGCGCCCTGCACAACCTCAGCGGCAAGTTGCTggg                                                                                                            >  2:1717121/1‑238 (MQ=255)
                                                                                                                             tCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGa                                                                                                            <  2:675234/238‑1 (MQ=255)
                                                                                                                             tCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCA‑CC‑GT‑AAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGa                                                                                                            <  1:1295728/238‑1 (MQ=255)
                                                                                                                             gccAGATTGGCCCGGAGAGGCGCCGGGGCATTGCCGAACTAAACGGGGAAGCCGAAGTGGCGGGCGGGGTGGTGACCCTGCAATCCGGCAAAAAGGCCCGGGA‑ATTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGa                                                                                                            <  2:1286343/237‑1 (MQ=255)
                                                                                                                              ccAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGCTCCGGCCAAAAAGCCCGAGA‑AGGGATCGCCG‑CC‑GT‑GGA‑GGACAAACTGGAAACGCTGAAAAGGAGTCTGCCGGAAGGCGGGGGGATAATTACCAAC‑A‑ACGAACGCAGCCAACTCCTTCGCCCCGACATCGCCAACCTCCACCGCAAgcagccgggag                                                                                                          >  2:1544536/1‑229 (MQ=255)
                                                                                                                                 gATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGGTCCCGCGGTCCGGCCAAAACGCCCCGGG‑AGGGATCGCCGCCC‑GT‑G‑C‑GGGCAAACCGGAAACGCCGGAAAGGAGTCTTCCGGCAGGGCGGGGGATAAGTA‑CAACAATAC‑ATCGCCGCCAACCCACTTGCCGCCCCATCCGCCCCCCCCCCGGCAAGTTGCttggcggca                                                                                                       >  2:204533/1‑231 (MQ=255)
                                                                                                                                    tGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGGGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTa                                                                                                    <  1:621037/239‑1 (MQ=255)
                                                                                                                                      gCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGGTCCTGCGGTCCGGCAAAAACCCCCGAGA‑AGGGATCGCCG‑CC‑CG‑GGA‑GGGCAAACTGGGAACGCCGAAAAGAAGTCTGCCGGCAGGCGTGGGGAGAGGTA‑CAAC‑ATACGATACCCGCCCGCCCATTGACCGCGCCCTCCGCAACCCCACCGGCCACGTGCTGGGAGAGGTTAtt                                                                                                  >  2:531844/1‑239 (MQ=255)
                                                                                                                                      gCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGATCCGGCCAAAACGCCCGAGA‑AGGGAGCGCCG‑CC‑GT‑GAA‑GGACAAACCCGAAACGCCGAAAAGAAGTCTGCCGGAAGGCGCGGAGAAAGGTT‑AAAC‑AAACGAACGCAACCAGCTCATTGACCGGGCCCTCGGCACACCCACCGGCAAGCTGCTGGGAGAGattatt                                                                                                  >  2:289377/1‑239 (MQ=255)
                                                                                                                                       cccGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGGGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATtg                                                                                                 >  1:1502937/1‑239 (MQ=255)
                                                                                                                                          ggAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTgtgg                                                                                              <  1:838267/239‑1 (MQ=255)
                                                                                                                                          ggAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTgtgg                                                                                              <  1:822808/239‑1 (MQ=255)
                                                                                                                                           gagaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGGGGCGGGCGGGGTGGTGATTCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTgtgg                                                                                              <  2:874487/238‑1 (MQ=255)
                                                                                                                                           gagaTGCGCCGGGGAATTGCGCAACTAAACGGAGAGGGAGAGGTGGCGGGGGGGGTGGGGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTgtgg                                                                                              <  2:384980/238‑1 (MQ=255)
                                                                                                                                                       ggCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGa                                                                                                            <  1:900567/212‑1 (MQ=255)
                                                                                                                                                               cGAACTAAACGGCGAAGGCGAAGTGGGGGGCGGGGTGGTGAGCCGGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTg                                                                          <  2:821037/238‑1 (MQ=255)
                                                                                                                                                               cGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTg                                                                          <  2:412437/238‑1 (MQ=255)
                                                                                                                                                                 aaCTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGGGGTCGCCG‑CC‑GG‑GGA‑GGGCAAACTGGAAAAGCTGAAAAGGAGTCTGCCGGAAGGCGGGGAGATAATTA‑CAAA‑ATACGAACGCAGCCAGCTCCTTTACCGCGCCCTCGACAACCCCAGCGGCAAGTTGGTGGGAGAGtttttt                                                                                                  >  2:900567/1‑212 (MQ=255)
                                                                                                                                                                   cTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGa                                                                                                            <  1:744532/200‑1 (MQ=255)
                                                                                                                                                                       aCGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTgg                                                                 <  1:1714359/239‑1 (MQ=255)
                                                                                                                                                                       aCGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTgg                                                                 <  1:1717121/239‑1 (MQ=255)
                                                                                                                                                                           cgaaggcgaagTGGCGGGCGGGGGGGTGATCCTGCGATCCGGCAAAAACGCCCGGGA‑AGGGATCGCCG‑CC‑GT‑GAA‑GGACAAAATGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGGGAAAGTTA‑AAAA‑AAAAGATCGCAGCCAGCTCATTGACCGCGCCATCCACAAACTCCCCGGCCAGTTGCTGGGAGAGTTTTTTGTGGGGGGGGGGGTCTGGGCGGTGTTTTTCTGGcggg                                                             >  2:798649/1‑236 (MQ=255)
                                                                                                                                                                            gaaggcgaagGGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCAtgt                                                            <  1:741280/239‑1 (MQ=255)
                                                                                                                                                                             aaggcgaagTGGCGGGCGGGGGGGTGGTCCTGCGATCCGGCAAAAAAGCCCGCGA‑AGTGGACGCCG‑CC‑GT‑GAA‑GGGCAAAATTGAAACGCTGAAAAGTAGGCTGCCGGGAGGGGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCCGCTCATTTACCCCGCCCTCGACAACCTCAGCCGCAAGTTGCTGGAAGAGGTtttt                                                                                                  >  2:744532/1‑200 (MQ=255)
                                                                                                                                                                              aggcgaagTGGCGGGCGGGGTGGTGACCCTGCGGTCCGTCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCAtgtg                                                           <  2:941944/238‑1 (MQ=255)
                                                                                                                                                                                  gaagTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCt                                                       <  1:240322/238‑1 (MQ=255)
                                                                                                                                                                                            gcgggGTGGTGAGCCTGCGATCCGGCAAAAACGCCCGAGA‑GGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCtggt                                             <  2:266514/238‑1 (MQ=255)
                                                                                                                                                                                                ggtggtGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATtgtg                                                                                               <  1:1498747/184‑1 (MQ=255)
                                                                                                                                                                                                ggtggtGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATtgtg                                                                                               >  2:1498747/1‑184 (MQ=255)
                                                                                                                                                                                                        tCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCg                                <  1:732149/239‑1 (MQ=255)
                                                                                                                                                                                                         ccTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGt                               <  1:798649/239‑1 (MQ=255)
                                                                                                                                                                                                          cTGCTATCCGGCAAAAACGCCCGAGA‑ATTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATATTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGtt                              <  2:1076964/239‑1 (MQ=255)
                                                                                                                                                                                                            gCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTg                             >  2:202239/1‑238 (MQ=255)
                                                                                                                                                                                                              gATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGGGGCGATTATTTCGTTGcc                           >  2:103185/1‑238 (MQ=255)
                                                                                                                                                                                                              gATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGGGCGCTCGGCGCTGGTGGGGGTTATTTGGTTGcc                           >  2:1671568/1‑238 (MQ=255)
                                                                                                                                                                                                               aTCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGcc                           >  2:383573/1‑237 (MQ=255)
                                                                                                                                                                                                                 ccGGCAAAACCGCCCGAGA‑AGTGAGCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTg                       <  2:1600093/239‑1 (MQ=255)
                                                                                                                                                                                                                 ccGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTg                       <  1:1346218/239‑1 (MQ=255)
                                                                                                                                                                                                                    gCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTgggg                    >  1:1705545/1‑239 (MQ=255)
                                                                                                                                                                                                                     cAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTgggg                    <  1:202239/238‑1 (MQ=255)
                                                                                                                                                                                                                     cAAAAACGCCCGAGA‑AGGGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCGGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTgggg                    <  2:1226092/238‑1 (MQ=255)
                                                                                                                                                                                                                           cGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTGGGGTTGTGTa             <  2:683163/239‑1 (MQ=255)
                                                                                                                                                                                                                            gCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTGGGGTTGTGTAt            <  2:700092/239‑1 (MQ=255)
                                                                                                                                                                                                                            gCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTGGGGTTGTGTAt            <  1:1512533/239‑1 (MQ=255)
                                                                                                                                                                                                                            gCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTGGGGTTGTGTAt            <  1:1703202/239‑1 (MQ=255)
                                                                                                                                                                                                                            gCCCGAGA‑AGGGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTGGGGTTGTGTAt            <  2:461873/239‑1 (MQ=255)
                                                                                                                                                                                                                              ccGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTg                       <  2:590881/226‑1 (MQ=255)
                                                                                                                                                                                                                              ccGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTg                       >  1:590881/1‑226 (MQ=255)
                                                                                                                                                                                                                                     aGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTGGGGTTGTGTATTGCTTTTa    <  2:1502937/239‑1 (MQ=255)
                                                                                                                                                                                                                                     aGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTGGGGTTGTGTATTGCTTTTa    <  1:1540665/239‑1 (MQ=255)
                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                    
ACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTGGGGTTGTGTATTGCTTTTATT  >  NC_000913/599382‑599850

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑