Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,978,503 Δ776 bp insB1insA insB1, insA

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1978503–1979269 1979278 10–776 69 [0] [0] 70 insB1–insA insB1,insA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 19785020 (0.000)63 (1.090) 52/268 0.1 100% intergenic (‑305/+16) flhD/insB1 flagellar class II regulon transcriptional activator, with FlhC/IS1 transposase B
?NC_000913 1979279 = 0 (0.000)intergenic (‑64/‑474) insA/uspC IS1 repressor TnpA/universal stress protein

GGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTAT  >  NC_000913/1979141‑1979421
                                                                                                                                          |                                                                                                                                              
ccttatacttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATaa                                                                                                                                            <  1:291233‑M2/5‑1 (MQ=255)
 tttacacttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacgtaaatgTATAAg                                                                                                                                           >  1:384503‑M2/138‑143 (MQ=255)
 tttacacttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgAATAAg                                                                                                                                           >  2:536888‑M2/138‑143 (MQ=255)
  ttacacttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactgcattacttaacctaagtgtctgagc                                                                                                                                          >  1:503765‑M2/137‑137 (MQ=255)
      acttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacatccatgTATAAGTCATa                                                                                                                                      >  1:740034‑M2/133‑143 (MQ=255)
       cttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATAc                                                                                                                                     <  1:1048965‑M2/12‑1 (MQ=255)
       cttatcgaggattttaccgaaatcgacgcaactgtacccgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcacttacttaacataaatgTATAAGTCATAc                                                                                                                                     <  1:480214‑M2/12‑1 (MQ=255)
           tctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattgtcaatagtgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACtttt                                                                                                                                 <  2:132596‑M2/16‑1 (MQ=255)
             taagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgt                                                                                                                               >  2:450824‑M2/126‑143 (MQ=255)
             taagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgt                                                                                                                               >  1:684987‑M2/126‑143 (MQ=255)
              gacactgttcctaaatcgacgcaactgtcctcttcactacacgcacatacaacggatgggcgctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgtt                                                                                                                              <  2:584646‑M2/19‑1 (MQ=255)
                 atttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgttttg                                                                                                                           <  1:336452‑M2/22‑1 (MQ=255)
                  tttttcctaaatcgagggaacagtacgcgtcacgacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTgg                                                                                                                          <  1:47132‑M2/23‑1 (MQ=255)
                    tttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGgt                                                                                                                        <  1:1087923‑M2/25‑1 (MQ=255)
                         taaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgatcttcaataatgagtcatgcagatcacaaaaaacaatcaattacttaacataaatgTATAAGACATACTTtggatttggtagaatt                                                                                                                   >  2:74116‑M2/114‑136 (MQ=255)
                             tcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATACGTCATACTTTTGTTTTGGGTGTATTTCaa                                                                                                               >  1:951405‑M2/110‑143 (MQ=255)
                                  gcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGt                                                                                                          <  1:1090667‑M2/39‑1 (MQ=255)
                                   caactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGtt                                                                                                         >  1:675466‑M2/104‑143 (MQ=255)
                                              gtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGttttt                                                                                              <  2:666436‑M2/51‑1 (MQ=255)
                                              gtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGttttt                                                                                              <  1:445801‑M2/51‑1 (MQ=255)
                                              gtcactacacgcacatacaacggaggggggctgcgatattaaaccatagtttgtgcagatcacacacaatacttaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGttttt                                                                                              <  1:465243‑M2/51‑1 (MQ=255)
                                               tcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTc                                                                                             >  1:483200‑M2/92‑143 (MQ=255)
                                                 actacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCACTCTGTCACAAAGTTTTTcgc                                                                                           >  2:1018626‑M2/90‑143 (MQ=255)
                                                   tacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaaaactccattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgcta                                                                                         >  1:1035245‑M2/88‑143 (MQ=255)
                                                     cacgcacatccaacgcaggggggctgtgattttcaataatgcgtgatgcagatcacaccaaacactcaatttcttaacataaatgTATAAGTAATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgctacg                                                                                       <  2:337643‑M2/58‑1 (MQ=255)
                                                      acgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgctacgc                                                                                      >  1:1038568‑M2/85‑143 (MQ=255)
                                                      acgcacagacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgctacgc                                                                                      <  1:899330‑M2/59‑1 (MQ=255)
                                                        gcacatacaacggaggtgggctgcgattttcaataatgcgtgatgcagatcactcaaaacactctattacttaacttaaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgctacgcta                                                                                    <  2:13131‑M2/61‑1 (MQ=255)
                                                        gcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgctacgcta                                                                                    <  1:285132‑M2/61‑1 (MQ=255)
                                                        gcacatacaacggaggggggctgcgattttcaataatgcgggatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTGGTTTTGGGTGTATTACAATTACATGAAAAGAttttcgctacacga                                                                                    >  2:141994‑M2/83‑139 (MQ=255)
                                                          acatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagc                                                                                  <  2:704544‑M2/63‑1 (MQ=255)
                                                            atgcaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagcaa                                                                                <  2:236089‑M2/65‑1 (MQ=255)
                                                             tacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagcaag                                                                               >  2:55938‑M2/78‑143 (MQ=255)
                                                                aacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacatatatgTATAAGTCATACTTTTGCCTTGCCTCTCACTTTATCTGTTAAAAAGTTTTTCGCTACgctagcaaggca                                                                            >  2:122723‑M2/75‑140 (MQ=255)
                                                                  cggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTCAAAAAGTTTTTCGCTACGCTAGCAAGCaaaa                                                                          >  1:1024886‑M2/73‑143 (MQ=255)
                                                                      gggtggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTATATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGa                                                                      <  2:86110‑M2/75‑1 (MQ=255)
                                                                              gcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGaa                                                              <  1:131530‑M2/83‑1 (MQ=255)
                                                                               cgattttcaaaaatgcgtgatgcagattacatcaaactgtttttgtctgaacagaaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGaat                                                             <  2:834774‑M2/84‑1 (MQ=255)
                                                                                gattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacatagatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGaata                                                            >  1:577404‑M2/59‑143 (MQ=255)
                                                                                gattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGaata                                                            >  2:1111139‑M2/59‑143 (MQ=255)
                                                                                   tttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATc                                                         >  1:26585‑M2/56‑143 (MQ=255)
                                                                                    ttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTCTTTTAATCAGTTAAATAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCg                                                        >  1:1106019‑M2/55‑143 (MQ=255)
                                                                                     tcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTGTGTATTGGGTGTATTTCAATCTGTTAAAAAGTTGTTCGCTACGGTGGCAAGCAAAACTGCAACAGGAGTTATCGa                                                       >  2:994089‑M2/54‑143 (MQ=255)
                                                                                       aataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATACTCGaaa                                                     >  2:63887‑M2/52‑143 (MQ=255)
                                                                                         taatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATg                                                   <  2:860977‑M2/94‑1 (MQ=255)
                                                                                          aatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAGATgg                                                  >  1:850637‑M2/49‑143 (MQ=255)
                                                                                             gcgtgatgcagataacacaaaacactgtattacttaacataaatgTATAAGTCATACGTTTGTTTTGGGTGTATTTCAATCTGTGAAAAAGTTTTTCACTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGAt                                               <  2:503765‑M2/98‑1 (MQ=255)
                                                                                               gtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTAATACTTTTGGTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTAAGCTAGCAAGCAAAAAGGAAACAGGAATATTCGAAATGGGATGt                                             >  2:32699‑M2/44‑143 (MQ=255)
                                                                                                tgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGtt                                            <  2:316102‑M2/101‑1 (MQ=255)
                                                                                                tgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGAAACAATGAAACAGGAATAATCGAAATGGGATGtt                                            <  2:675466‑M2/101‑1 (MQ=255)
                                                                                                    gcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTgcgc                                        >  1:1010124‑M2/39‑143 (MQ=255)
                                                                                                    gcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAACCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAACTGGCCTGTCgcgc                                        >  1:486716‑M2/39‑143 (MQ=255)
                                                                                                     cagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGca                                       >  2:313051‑M2/38‑143 (MQ=255)
                                                                                                     cagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGCTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGGAACAGGAATAATCGAAATGGGATGTTGCGca                                       >  2:805556‑M2/38‑143 (MQ=255)
                                                                                                        agctcacaaaacgcgcaattacttaacttaagtgTATAAGTCATACTTCTGTGGTGGGTGTATGTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAg                                    <  2:840767‑M2/109‑1 (MQ=255)
                                                                                                                aaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGTTAGCAAGCAAAATTGAAACAGGAATAATCGAAATGGGATGTTGAGCACAGtcaaaaaa                            >  2:86718‑M2/27‑141 (MQ=255)
                                                                                                                 aacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATaa                           <  2:483200‑M2/118‑1 (MQ=255)
                                                                                                                     ctcaattacttaacataagtgGATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCa                       <  2:431645‑M2/122‑1 (MQ=255)
                                                                                                                      tcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTCTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCAc                      <  1:1020717‑M2/123‑1 (MQ=255)
                                                                                                                        aattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGATTAATCGAAATGGGTTGTTGCGCACAGTCAAAATAACTCACCg                    >  1:473637‑M2/19‑143 (MQ=255)
                                                                                                                              ttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAaata              <  1:782077‑M2/131‑1 (MQ=255)
                                                                                                                                 acatatatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAatc           <  2:858086‑M2/134‑1 (MQ=255)
                                                                                                                                 acataaatgTATGAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAatc           <  1:74116‑M2/134‑1 (MQ=255)
                                                                                                                                  cataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAatca          <  1:1094040‑M2/135‑1 (MQ=255)
                                                                                                                                   ataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGCTGTTGCGCACCGTCTTATTAACTCACCGTATAtaatcct         >  1:691859‑M2/8‑141 (MQ=255)
                                                                                                                                   ataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAatcat         <  2:674936‑M2/136‑1 (MQ=255)
                                                                                                                                   ataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAatcat         >  1:698390‑M2/8‑143 (MQ=255)
                                                                                                                                   ataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTAAACTGTTGAGCTAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTAAAAATAACTCACTCTAATTAatcat         >  2:840905‑M2/8‑143 (MQ=255)
                                                                                                                                     aaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCt       <  2:577404‑M2/138‑1 (MQ=255)
                                                                                                                                          tataAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCtat  >  1:756056/1‑143 (MQ=255)
                                                                                                                                          |                                                                                                                                              
GGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTAT  >  NC_000913/1979141‑1979421

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.