Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,296,0600CT29.0% 81.1 / 36.0 70intergenic (+266/+376)gltP/yjcOglutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein
Reads supporting (aligned to +/- strand):  ref base C (27/22);  new base T (11/9);  total (39/31)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01
Rejected as consensus: Frequency below/above cutoff threshold.

TAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCT  >  NC_000913/4295918‑4296198
                                                                                                                                               |                                                                                                                                          
tAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAAc                                                                                                                                            <  1:890954/143‑1 (MQ=32)
  aGGCGTTTCTTCCGCATCCGCTATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGc                                                                                                                                          <  1:295628/143‑1 (MQ=255)
    gCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAG‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGccc                                                                                                                                        >  2:250912/1‑142 (MQ=17)
      gTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGa                                                                                                                                      >  1:17319/1‑143 (MQ=17)
       tttATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGAt                                                                                                                                     >  1:143813/1‑143 (MQ=17)
          aTGCCGCATCCGACATCAACGCCTGAAGCGAAGCTTAACGCAGCTTATCAGCCCTACACCAGACAGCGCACTAGCCTGATATAGCGTGTT‑ACTATAGGTCGGATAAGGCGTGTGCGCCGCACCAGACACCCAGGCCCGATGCg                                                                                                                                  >  2:37774/1‑143 (MQ=2)
           tGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAGTAGACGGATTTAGCGCGAG‑TGTTTAGGTCGGATAAGACGTTTACGCGGCATCGGAGCGCAATGCCTGACGCGa                                                                                                                                 >  2:94791/1‑143 (MQ=11)
             ccGCATCCGACCTGAACGCCTGATGCGACGCTTAGCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACg                                                                                                                               <  2:480478/143‑1 (MQ=12)
             ccGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATACGGCGTTTACGCCGCATCCGACATCAATGCGTGATGCGACg                                                                                                                               >  2:569582/1‑143 (MQ=12)
              cGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGCT‑TTCGTCGTACCGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGc                                                                                                                              >  1:508839/1‑143 (MQ=11)
               gCATGCAACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGAATTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGATTACGCCACATCCGACATCAACGCCTGATGcgccgcg                                                                                                                             >  2:743666/1‑142 (MQ=11)
                     gACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGc                                                                                                                          <  2:6655/140‑1 (MQ=18)
                     gACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGc                                                                                                                          >  1:6655/1‑140 (MQ=34)
                     gACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGGGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCGTCCGGCATCCATGCCTGATGCGACGCTTGcccc                                                                                                                       >  1:224996/1‑141 (MQ=11)
                       cATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGt                                                                                                                     <  1:1005590/143‑1 (MQ=38)
                        aTCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTc                                                                                                                    >  1:754448/1‑143 (MQ=25)
                         tCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTCGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCGTCCGACATCAGTGCCTGATGCGATGTTTGCGGCGTCt                                                                                                                   >  1:65707/1‑143 (MQ=11)
                         tCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCCACGCTTGCCGCGCCt                                                                                                                   >  1:344428/1‑143 (MQ=255)
                            aCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTGTTAt                                                                                                                >  1:169231/1‑143 (MQ=21)
                              gCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCa                                                                                                              <  1:401185/143‑1 (MQ=39)
                                cTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTGTCAgg                                                                                                            >  1:485068/1‑143 (MQ=37)
                                 tGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc                                                                                                           <  1:629258/143‑1 (MQ=12)
                                 tGATGCGACGCTTAACGCGTCTTATCAGGCATACGCAGGAGAGCGAAGTAGATTGGTTTTGAGTGGT‑TTTGTAGGTTGGGTAAGGTGTTTGCGACGCATCCGGCATCAACGCCTGATGCGACGCTTGCCGCGTCTTATGAggg                                                                                                           >  1:188350/1‑142 (MQ=2)
                                  gtggCGACTCTTGCCGGGTCTTATCAGGCCTACGCCAGGCAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                                                          <  2:614414/140‑1 (MQ=11)
                                  gATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACCTCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                                                          >  1:305737/1‑143 (MQ=37)
                                       gACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTCTCACGCCTAAGc                                                                                                     >  1:232604/1‑143 (MQ=255)
                                         cGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCa                                                                                                   <  1:398678/143‑1 (MQ=39)
                                                    tCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGGCGCTTGCCGCGTCTTGTCCGGCCTACGCCAGACAGCGCAAt                                                                                        >  1:620562/1‑143 (MQ=255)
                                                     cTTATCAGTCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATa                                                                                       <  2:714220/143‑1 (MQ=37)
                                                     cTTATCAGGCTTACGAGAGGCAGCGCAATAGCCTGACTGAGCGTCATGGTTCCCGGT‑ATAGAAGGGGTCTACTCAGTATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATa                                                                                       <  2:233910/143‑1 (MQ=9)
                                                      ttATCAGGCCTACGCCAGACAGCGCACTAGCCTGATGTTGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTCTCAGGCGTACGCCAGACCGCGCAACAg                                                                                      >  1:1062375/1‑143 (MQ=11)
                                                       tATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGAc                                                                                                                                <  1:701032/100‑1 (MQ=21)
                                                       tATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGAc                                                                                                                                >  2:701032/1‑100 (MQ=18)
                                                         tCAGGCTTACGCCAGACGGCTCTATAGCCTGATTTAGGGTCAT‑TTTGTGGGTCGGATAAGGCGTTTACGCCGCACCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCt                                                                                   <  2:241068/143‑1 (MQ=14)
                                                         tCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATc                                                                                                               <  2:1039139/115‑1 (MQ=255)
                                                          cAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAg                                                                                                             >  1:73677/1‑116 (MQ=18)
                                                          cAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGt                                                                                                                     <  1:677743/108‑1 (MQ=25)
                                                          cAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAg                                                                                                             <  2:73677/116‑1 (MQ=40)
                                                          cAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑CTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGt                                                                                                                     >  2:677743/1‑108 (MQ=255)
                                                            ggCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGAt                                                                                >  1:32577/1‑143 (MQ=38)
                                                             gCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGAtt                                                                               >  1:174162/1‑143 (MQ=38)
                                                              ccTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGc                                                                                                                                          <  2:36671/83‑1 (MQ=25)
                                                                   gCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGcc                                                                                                                         <  2:418538/95‑1 (MQ=37)
                                                                   gCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGcc                                                                                                                         >  1:418538/1‑95 (MQ=37)
                                                                     gaGACAGCGCTTTAGCCTGATTTAGGGTGAT‑TTTGTGGGTCGGATCGGGGGTTTCCGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGa                                                                       <  2:161594/142‑1 (MQ=11)
                                                                            cgcAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTa                                                                <  1:110063/143‑1 (MQ=38)
                                                                               aaTAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCg                                                                                                                                  <  2:753298/74‑1 (MQ=19)
                                                                               aaTAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCg                                                                                                                                  >  1:753298/1‑74 (MQ=35)
                                                                                aTAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATCAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTc                                                            <  1:787428/143‑1 (MQ=38)
                                                                                    ccTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGAt                                                        >  1:633391/1‑143 (MQ=38)
                                                                                        acttctcGTGAG‑TTTGTGGCGCGGAGAAGGCGTTTCCGCCCCACCCGGCGTCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAgg                                                    <  2:775338/137‑1 (MQ=14)
                                                                                              cGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTa                                              >  1:333379/1‑143 (MQ=38)
                                                                                                tGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACg                                                                                                                               <  1:257730/60‑1 (MQ=255)
                                                                                                tGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc                                                                                                           <  2:338834/80‑1 (MQ=255)
                                                                                                           ggTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCcgc                                                                                                                       <  2:880353/58‑1 (MQ=255)
                                                                                                           ggTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCcgc                                                                                                                       >  1:880353/1‑58 (MQ=255)
                                                                                                           ggTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAtttt                                                                   <  2:1020639/110‑1 (MQ=40)
                                                                                                            gTCGTATAATGCTTTTTCGCCGCATCCGACATCAACGCCTGATGCGACGCTTTCCGCGTCTTATCAGTCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGAc                                 <  2:508839/143‑1 (MQ=11)
                                                                                                            gTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGAc                                 >  1:1114773/1‑143 (MQ=39)
                                                                                                             tCGGATTAGGCGTTTACGCCGCAGCCTACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACa                                <  1:288329/143‑1 (MQ=255)
                                                                                                               ggATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCTAGACAGCGCAATAGCCTGATTTAGCGTCATTCTCTAGATCGGATCAGGCGTTTCCGCAGCATCCCAccta                              >  2:510913/1‑140 (MQ=11)
                                                                                                                        gTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGACCTACGCCAGACAGCGCAATAGCCTGCTTTACCGTCATATCGTAGGTCGGATACGGCCTGTATGCCGCACCCCACATCCACgacagc                     >  2:352954/1‑138 (MQ=14)
                                                                                                                         tttACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGac                    >  2:737440/1‑142 (MQ=37)
                                                                                                                          ttACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATg                   >  1:166477/1‑143 (MQ=38)
                                                                                                                                cgcATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGc             >  1:90746/1‑143 (MQ=35)
                                                                                                                                   aTCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTGGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTa          <  1:280715/143‑1 (MQ=25)
                                                                                                                                         cATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTCAGCGCGt    >  2:919962/1‑143 (MQ=25)
                                                                                                                                          aTCACCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTc   <  1:775194/143‑1 (MQ=17)
                                                                                                                                          aTCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGCTGCGACGCTTGCcgcgcc   >  2:1004445/1‑141 (MQ=255)
                                                                                                                                           tCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTAATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCGGATGCGACGCTTACCGCGTCt  >  1:414561/1‑143 (MQ=16)
                                                                                                                                              aCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCa                                                                                                   <  1:697159/43‑1 (MQ=35)
                                                                                                                                               |                                                                                                                                          
TAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAT‑TTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCT  >  NC_000913/4295918‑4296198

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑