mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4345644 = | 109 (0.990) | 3 (0.030) | 3/400 | NT | 2.9% | intergenic (‑86/+36) | yjdF/fumB | DUF2238 family inner membrane protein/anaerobic class I fumarate hydratase (fumarase B) |
| ? | NC_000913 | 4345664 = | 102 (1.020) | intergenic (‑106/+16) | yjdF/fumB | DUF2238 family inner membrane protein/anaerobic class I fumarate hydratase (fumarase B) | |||||
| * | ? | NC_000913 | = 4160857 | 133 (1.250) | 4 (0.040) | 4/438 | NT | 2.9% | intergenic (‑67/‑267) | sthA/fabR | pyridine nucleotide transhydrogenase, soluble/transcriptional repressor of fabA and fabB |
| ? | NC_000913 | 4498181 = | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | 4160853 = | 132 (1.240) | 7 (0.060) | 7/438 | NT | 4.9% | intergenic (‑63/‑271) | sthA/fabR | pyridine nucleotide transhydrogenase, soluble/transcriptional repressor of fabA and fabB |
| ? | NC_000913 | = 4499511 | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | 3438197 = | 118 (1.070) | 4 (0.040) | 4/436 | NT | 3.1% | coding (174/411 nt) | mscL | mechanosensitive channel protein, high conductance |
| ? | NC_000913 | 3438322 = | 135 (1.240) | coding (299/411 nt) | mscL | mechanosensitive channel protein, high conductance | |||||
| * | ? | NC_000913 | = 2877908 | 83 (0.760) | 3 (0.030) | 3/426 | NT | 3.8% | intergenic (+290/+661) | iap/ygbF | aminopeptidase in alkaline phosphatase isozyme conversion/CRISPR adaptation ssRNA endonuclease |
| ? | NC_000913 | = 2877951 | 72 (0.680) | intergenic (+333/+618) | iap/ygbF | aminopeptidase in alkaline phosphatase isozyme conversion/CRISPR adaptation ssRNA endonuclease | |||||
| * | ? | NC_000913 | = 2515616 | NA (NA) | 4 (0.040) | 4/436 | NT | 4.0% | noncoding (1344/1345 nt) | IS186 | repeat region |
| ? | NC_000913 | 2536312 = | 97 (0.890) | coding (479/510 nt) | crr | glucose‑specific enzyme IIA component of PTS | |||||
| * | ? | NC_000913 | = 1651548 | NA (NA) | 4 (0.040) | 4/440 | NT | 4.3% | noncoding (706/706 nt) | IS2 | repeat region |
| ? | NC_000913 | = 1937140 | 89 (0.810) | coding (489/870 nt) | yebK | putative DNA‑binding transcriptional regulator | |||||
| * | ? | NC_000913 | = 534090 | 118 (1.070) | 4 (0.040) | 4/438 | NT | 3.3% | coding (175/1782 nt) | gcl | glyoxylate carboligase |
| ? | NC_000913 | 534094 = | 118 (1.080) | coding (179/1782 nt) | gcl | glyoxylate carboligase | |||||