New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3948426 =	145 (2.180)	3 (0.050)	3/266	9.8	2.1%	intergenic (+2/+23)	yifE/yifB	UPF0438 family protein/magnesium chelatase family protein and putative transcriptional regulator
	?	NC_000913	3948449 =	142 (2.290)					coding (1521/1521 nt)	yifB	magnesium chelatase family protein and putative transcriptional regulator
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGAAAGTTGCACGAACCATTGCTGATATTGATCAGTCTGACATTATCACACGTCAGCATTTGCAGGAGGCAGTTAGCTATCGAGCGATTGACCGTTTGCTCATCCATCTGCAGAAACTACTGACATAAAAAAAGGGCATTTCGCCCTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3948576‑3948426 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccctttttTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGTTCGTGCAACTTTCAATAACCGCTGCCA  >  NC_000913/3948449‑3948589                                                                                                                                                                                                                                                                                                      TGAAAGTTGCACGAACCATTGCTGATATTGATCAGTCTGACATTATCACACGTCAGCATTTGCAGGAGGCAGTTCGCTATCGAGCGATTGACCGTTTGCTCCTCCATCTGCAGAAACTACTGACATAAAAAAAGCACATTTCG                                                                                                                                                       >  2:381416/1‑143   cAAGTTGCACGAACCATTGCTGATATTGATCAGTCTGACATTATCACACGTCAGCATTTGCAGGAGGCAGTTAGCTATCGAGCGATTGACCGTTTGCTCATCCATCTGCAGAAACTACTGACATAAAAAAAGGGCATTTCGCC                                                                                                                                                     <  1:47511/142‑1   AAAGTTGCACGAACCATTGCTGATATTGATCAGTCTGACATTATCACACGTCAGCATTTGCAGGAGGCAGTTAGCTATCGAGCGATTGACCGTTTGCTCATCCATCTGCAGAAACTACTGACATAAAAAAAGGGCATTTCGCC                                                                                                                                                     >  1:794928/1‑143   AAAGTTGCACGAACCATTGCTGATATTGATCAGTCTGACATTATCACACGTCAGCATTTGCAGGAGGCAGCTAGCTATCGAGCGATTGACCGAGTGCTCACCGATCTGCAGAAACTACTGCAATAAAAACATGGCATCTCGCC                                                                                                                                                     >  2:1016570/1‑143     AGTTGCACGAACCATTGCTGATATTGATCAGTCTGACATTATCACACGTCAGCATTTGCAGGAGGCAGTTAGCTATCGAGCGATTGACCGTTTGCTCATCCATCTGCAGAAACTACTGACATAAAAAAAGGGCATTTCGCCCT                                                                                                                                                   >  2:575806/1‑143      GTTGCACGAACCATTGCTGATATTGATCAGTCTGACATTATCACACGTCAGCATTTGCAGGAGGCAGTTAGCTATCGAGCGATTGACCGTTTGCTCATCCATCTGCAGAAACTACTGACATAAAAAAAGGGCAGTTCGCCCTT                                                                                                                                                  >  1:516764/1‑143       TTGCACGAACCATTGCTGCTATTGATCAGTCTGACATTATCCCACGTCAGCATTTGCAGGAGGCAGTTAGCTAGCGAGCGATTGACCGTTTGCTCATCCATCTGCAGAAACTACTGACATAAAAAAAGGGCATTTCGCCCTTT                                                                                                                                                 <  1:13786/143‑1       TTGCACGAACCATTGCTGATATTGATCAGTCTGACATTATCACACGTCAGCATTTGCAGGAGGCAGTTAGCTATCGAGCGATTGACCGTTTGCTCATCCATCTGCAGAAACTACTGACATAAAAAAAGGGCATTTCGCCCTTT                                                                                                                                                 <  1:1120968/143‑1        TGCACGAACCATTGCTGATATTGAGCAGTCTGACTTTATCACACGTCAGCATTTGCAGGAGGCAGTTAGCTATCGAGCGATTGACCGTTTGCTCATCCATCTGCAGAAACTACTGACATAAAAAAAGGGCATTTCGCCCTTTT                                                                                                                                                <  2:426545/143‑1                                                                                                          ATCTGCAGAAACTACTGACATAAAAAAAGGGCATTTCGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGA                                              >  1:65225/1‑143                                                                                                            CTGCAGAAACTACTGACATAAAAAAAGGGCATTTCGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATC                                            <  2:65225/143‑1                                                                                                                                 AAAAAGGGCATTTCGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTACCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGTTCGTGC                       >  2:446219/1‑143                                                                                                                                                 CCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGCTCAATATCAGCAGTGGTTCGTGCAACTGTCACTAACCGC       >  2:334059/1‑143                                                                                                                                                  CTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCACTATCAGCAATGGTTCGTGCAACTTTCAATACCCCCT      >  1:134746/1‑143                                                                                                                                                  CTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGTTCGTGCAACTTTCAATAACCGCT      >  1:497803/1‑143                                                                                                                                                      TTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGTTCGTGCAACTTTCAATAACCGCTGCCA  <  1:882825/143‑1                                                                                                                                                      TTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCGCCTGCAGATGCTGACGTGTGAGAAGGTCAGACTGATCAATATCAGCAAGGGTTCGTGCAACTATCAATAAACGCTGCCA  >  2:326791/1‑143                                                                                                                                                                                                                                                                                                      TGAAAGTTGCACGAACCATTGCTGATATTGATCAGTCTGACATTATCACACGTCAGCATTTGCAGGAGGCAGTTAGCTATCGAGCGATTGACCGTTTGCTCATCCATCTGCAGAAACTACTGACATAAAAAAAGGGCATTTCGCCCTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3948576‑3948426 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccctttttTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGTTCGTGCAACTTTCAATAACCGCTGCCA  >  NC_000913/3948449‑3948589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.